deploy_release.yml

name: Deploy
on:
  release:
    types:
      - published

jobs:
  pypi:
    name: Deploy PyPI

    runs-on: ubuntu-22.04

    strategy:
      matrix:
        python-version: ["3.11"]

    environment:
      name: pypi
      url: https://pypi.org/p/amici

    permissions:
      id-token: write

    steps:
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v5
      with:
        python-version: ${{ matrix.python-version }}

    - uses: actions/checkout@v4
      with:
        fetch-depth: 20

    - name: Set up SWIG
      uses: ./.github/actions/setup-swig

    - run: echo "AMICI_DIR=$(pwd)" >> $GITHUB_ENV

    - name: sdist
      run: scripts/buildSdist.sh

    - name: Publish a Python distribution to PyPI
      uses: pypa/gh-action-pypi-publish@release/v1
      with:
        packages-dir: python/sdist/dist

  bioSimulatorsUpdateCliAndDockerImage:
    name: Release to BioSimulators
    needs: pypi
    runs-on: ubuntu-22.04
    env:
      # Owner/repository-id for the GitHub repository for the downstream command-line interface and Docker image
      DOWNSTREAM_REPOSITORY: biosimulators/Biosimulators_AMICI

      # Username/token to use the GitHub API to trigger an action on the GitHub repository for the downstream
      # command-line interface and Docker image. Tokens can be generated at https://github.com/settings/tokens.
      # The token should have the scope `repo`
      GH_ISSUE_USERNAME: ${{ secrets.BIOSIMULATORS_USERNAME }}
      GH_ISSUE_TOKEN: ${{ secrets.BIOSIMULATORS_TOKEN }}
    steps:
      - name: Trigger GitHub action that will build and release the downstream command-line interface and Docker image
        run: |
          PACKAGE_VERSION="${GITHUB_REF/refs\/tags\/v/}"
          WORKFLOW_FILE=ci.yml

          curl \
            -X POST \
            -u ${GH_ISSUE_USERNAME}:${GH_ISSUE_TOKEN} \
            -H "Accept: application/vnd.github.v3+json" \
              https://api.github.com/repos/${DOWNSTREAM_REPOSITORY}/actions/workflows/${WORKFLOW_FILE}/dispatches \
            -d "{\"ref\": \"dev\", \"inputs\": {\"simulatorVersion\": \"${PACKAGE_VERSION}\", \"simulatorVersionLatest\": \"true\"}}"

  dockerhub:
    name: Release to Docker Hub
    runs-on: ubuntu-22.04

    steps:
    - name: Set up Python
      uses: actions/setup-python@v5
      with:
        python-version: "3.11"
    - uses: actions/checkout@v4
    - run: git archive -o container/amici.tar.gz --format=tar.gz HEAD
    - name: Set up QEMU
      uses: docker/setup-qemu-action@v3
    - name: Set up Docker Buildx
      uses: docker/setup-buildx-action@v3
    - name: Publish to Registry
      uses: elgohr/Publish-Docker-Github-Action@v5
      with:
        name: dweindl/amici
        username: ${{ secrets.DOCKER_USERNAME }}
        password: ${{ secrets.DOCKER_PASSWORD }}
        workdir: container/
        dockerfile: Dockerfile
        tag_semver: true
        platforms: linux/amd64,linux/arm64