From f7b0cb0185ac4bd48a121c557f5db10cf5e09d80 Mon Sep 17 00:00:00 2001
From: Ally Hawkins <ally.hawkins@ccdatalab.org>
Date: Tue, 17 Dec 2024 15:00:35 -0600
Subject: [PATCH] install aws cli in docker

---
 analyses/cell-type-consensus/Dockerfile | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/analyses/cell-type-consensus/Dockerfile b/analyses/cell-type-consensus/Dockerfile
index 685a3bb72..537b7d3da 100644
--- a/analyses/cell-type-consensus/Dockerfile
+++ b/analyses/cell-type-consensus/Dockerfile
@@ -21,6 +21,11 @@ RUN apt-get -y update &&  \
   pandoc \
   && rm -rf /var/lib/apt/lists/*
 
+# Install aws cli 
+RUN curl "https://awscli.amazonaws.com/awscli-exe-linux-x86_64.zip" -o "awscliv2.zip"
+RUN unzip awscliv2.zip
+RUN ./aws/install
+
 # Install renv to enable later package installation
 RUN Rscript -e "install.packages('renv')"