v0.4.10

What's Changed

• major code improvements for phenotype calculation in #84, #86, #88,
• close #85, #90
• draft an evaluation sub-module for calling essential hits
  • original codes from Tyler Fair (@tdfair) and M. Horlbeck, (@mhorlbeck)

Full Changelog: v0.4.7...v0.4.10

v0.4.6

What's Changed

• code improvements and bug fixes in #81

Full Changelog: v0.4.5...v0.4.6

v0.4.5

What's Changed

• key changes and improvements in #75, #76, #77, #78

Full Changelog: v0.4.1...v0.4.5

v0.4.1

What's Changed

• refactor modules and add new analysis features in #74
  • add PyDESeq2 as a method for phenotype calculation
  • update docs text and format
  • introduce visualize module, related to #63
  • change phenoscore fold-change log transformation default behavior

Full Changelog: v0.4.0...v0.4.1

v0.4.0

What's Changed

• first release of CLI with guidecounter subcommand in #69

Full Changelog: v0.3.5...v0.4.0

v0.3.5

What's Changed

• fix env file for docs #66
• fix bugs and improve code in #67

Full Changelog: v0.3.4...v0.3.5

v0.3.4

What's Changed

• update plotting code formats in #65

Full Changelog: v0.3.3...v0.3.4

v0.3.3

What's Changed

PR #64

• improve options for low count filters
• add data dashboard module

Full Changelog: v0.3.2...v0.3.3

v0.3.2

What's Changed

• major code changes and logical improvements in analysis steps in #61

Full Changelog: v0.3.1...v0.3.2

v0.3.1

What's Changed

• add trim_first_g option for fastq2count task
  • for more info about this logic, see Fig 2 here
• minor code and document improvements in #59

Full Changelog: v0.3.0...v0.3.1