rmSplitedSumBedHeader.pbs

# Request 1 processors on 1 node
#PBS -l nodes=1:ppn=1

#Request x number of hours of walltime
#PBS -l walltime=3:00:00

#Request 15 gigabyte of memory per process
#PBS -l mem=15gb

#Request that regular output and terminal output go to the same file
#PBS -j oe
#PBS -m abe

date

WD=${WD}

cd $WD

FILES=$(ls *.sum.bed)
for file in $FILES; do
	sed '1d' $file > ${file}.new
	rm $file
	mv ${file}.new $file
done


STUDIES=$(ls *AN.bed|sed 's/.bed//g')

for STUDY in $STUDIES; do
	cat splited.${STUDY}.*.sum.bed > ${STUDY}.catsum.bed
done


date