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ariba.yml
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ariba.yml
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name: ariba
channels:
- bioconda
- anaconda
- r
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- ariba=2.14.4=py36he1b5a44_0
- bcftools=1.9=ha228f0b_4
- beautifulsoup4=4.8.0=py36_0
- biopython=1.74=py36h7b6447c_0
- blas=1.0=mkl
- bowtie2=2.3.4.3=py36he860b03_1
- bzip2=1.0.8=h7b6447c_0
- ca-certificates=2019.11.27=0
- cd-hit=4.8.1=hdbcaa40_0
- certifi=2019.11.28=py36_0
- curl=7.65.2=hbc83047_0
- cycler=0.10.0=py36_0
- dbus=1.13.6=h746ee38_0
- dendropy=4.4.0=py_1
- expat=2.2.6=he6710b0_0
- fontconfig=2.13.0=h9420a91_0
- freetype=2.9.1=h8a8886c_1
- glib=2.56.2=hd408876_0
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- icu=58.2=h9c2bf20_1
- intel-openmp=2019.4=243
- jpeg=9b=h024ee3a_2
- kiwisolver=1.1.0=py36he6710b0_0
- krb5=1.16.1=h173b8e3_7
- libcurl=7.65.2=h20c2e04_0
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libpng=1.6.37=hbc83047_0
- libssh2=1.8.2=h1ba5d50_0
- libstdcxx-ng=9.1.0=hdf63c60_0
- libuuid=1.0.3=h1bed415_2
- libxcb=1.13=h1bed415_1
- libxml2=2.9.9=hea5a465_1
- matplotlib=3.1.0=py36h5429711_0
- mkl=2019.4=243
- mkl-service=2.0.2=py36h7b6447c_0
- mkl_fft=1.0.14=py36ha843d7b_0
- mkl_random=1.0.2=py36hd81dba3_0
- mummer=3.23=pl526_8
- ncurses=6.1=he6710b0_1
- numpy=1.16.4=py36h7e9f1db_0
- numpy-base=1.16.4=py36hde5b4d6_0
- openssl=1.1.1d=h7b6447c_3
- pcre=8.43=he6710b0_0
- perl=5.26.2=h14c3975_0
- pip=19.2.2=py36_0
- pyfastaq=3.17.0=py_2
- pymummer=0.10.3=py_2
- pyparsing=2.4.2=py_0
- pyqt=5.9.2=py36h05f1152_2
- pysam=0.15.3=py36hda2845c_1
- python=3.6.9=h265db76_0
- python-dateutil=2.8.0=py36_0
- pytz=2019.2=py_0
- qt=5.9.7=h5867ecd_1
- readline=7.0=h7b6447c_5
- samtools=1.9=h8571acd_11
- setuptools=41.0.1=py36_0
- sip=4.19.8=py36hf484d3e_0
- six=1.12.0=py36_0
- soupsieve=1.9.2=py36_0
- spades=3.13.1=0
- sqlite=3.29.0=h7b6447c_0
- tbb=2019.4=hfd86e86_0
- tk=8.6.8=hbc83047_0
- tornado=6.0.3=py36h7b6447c_0
- wget=1.20.1=h20c2e04_0
- wheel=0.33.4=py36_0
- xz=5.2.4=h14c3975_4
- zlib=1.2.11=h7b6447c_3
prefix: /processing_Data/bioinformatics/pipelines/miniconda3/envs/ariba