-
Notifications
You must be signed in to change notification settings - Fork 0
/
nanopore.yml
135 lines (134 loc) · 3.92 KB
/
nanopore.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
name: nanopore
channels:
- bioconda
- anaconda
- r
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- atk=2.32.0=haf93ef1_0
- backports=1.0=py_2
- backports.functools_lru_cache=1.5=py_2
- backports_abc=0.5=py_0
- biopython=1.74=py27h516909a_0
- boost=1.70.0=py27h9de70de_1
- boost-cpp=1.70.0=h8e57a91_2
- bwa=0.7.17=hed695b0_6
- bzip2=1.0.8=h516909a_1
- ca-certificates=2019.10.16=0
- cairo=1.16.0=hfb77d84_1002
- canu=1.8=he1b5a44_2
- certifi=2019.9.11=py27_0
- chrpath=0.16=h14c3975_1001
- curl=7.65.3=hf8cf82a_0
- cycler=0.10.0=py27_0
- dbus=1.13.6=he372182_0
- eigen=3.3.7=h6bb024c_1000
- expat=2.2.5=he1b5a44_1003
- flye=2.5=py27he513fc3_0
- fontconfig=2.13.1=h86ecdb6_1001
- freetype=2.10.0=he983fc9_1
- fribidi=1.0.5=h516909a_1002
- functools32=3.2.3.2=py27_1
- futures=3.3.0=py27_0
- gdk-pixbuf=2.36.12=h7a26e22_1003
- gettext=0.19.8.1=hc5be6a0_1002
- giflib=5.1.9=h516909a_0
- glib=2.58.3=h6f030ca_1002
- gnuplot=5.2.7=he39d25e_2
- gobject-introspection=1.56.1=py27h2da5eee_1002
- graphite2=1.3.13=hf484d3e_1000
- grep=2.14=h14c3975_3
- gst-plugins-base=1.14.5=h0935bb2_0
- gstreamer=1.14.5=h36ae1b5_0
- gtk2=2.24.32=h586f36d_1
- harfbuzz=2.4.0=h9f30f68_3
- hdf5=1.10.4=nompi_h3c11f04_1106
- htslib=1.9=ha228f0b_7
- icu=64.2=he1b5a44_1
- jpeg=9c=h14c3975_1001
- kiwisolver=1.1.0=py27he6710b0_0
- krb5=1.16.3=h05b26f9_1001
- libblas=3.8.0=12_openblas
- libcblas=3.8.0=12_openblas
- libclang=8.0.1=hc9558a2_0
- libcurl=7.65.3=hda55be3_0
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20170329=hf8c457e_1001
- libffi=3.2.1=he1b5a44_1006
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=9.1.0=hdf63c60_0
- libgd=2.2.5=h82918c6_1006
- libgfortran-ng=7.3.0=hdf63c60_0
- libiconv=1.15=h516909a_1005
- liblapack=3.8.0=12_openblas
- libllvm8=8.0.1=hc9558a2_0
- libopenblas=0.3.7=h6e990d7_1
- libpng=1.6.37=hed695b0_0
- libssh2=1.8.2=h22169c7_2
- libstdcxx-ng=9.1.0=hdf63c60_0
- libtiff=4.0.10=h57b8799_1003
- libuuid=2.32.1=h14c3975_1000
- libwebp=1.0.2=h576950b_1
- libxcb=1.13=h14c3975_1002
- libxkbcommon=0.8.4=h516909a_0
- libxml2=2.9.9=hee79883_5
- llvm-openmp=8.0.1=hc9558a2_0
- lz4-c=1.8.3=he1b5a44_1001
- masurca=3.3.3=pl526haae6466_0
- matplotlib=2.2.4=py27_1
- matplotlib-base=2.2.4=py27h250f245_1
- miniasm=0.3_r179=ha92aebf_0
- minimap2=2.17=h84994c4_0
- nanopolish=0.11.1=h99ef0c4_0
- ncurses=6.1=hf484d3e_1002
- nspr=4.20=hf484d3e_1000
- nss=3.46=he751ad9_0
- numpy=1.16.4=py27h95a1406_0
- openjdk=11.0.1=h516909a_1016
- openmp=8.0.1=0
- openssl=1.1.1=h7b6447c_0
- pango=1.42.4=ha030887_1
- pcre=8.41=hf484d3e_1003
- perl=5.26.2=h516909a_1006
- perl-filesys-df=0.92=pl526h14c3975_3
- pilon=1.23=1
- pip=19.2.3=py27_0
- pixman=0.38.0=h516909a_1003
- pthread-stubs=0.4=h14c3975_1001
- pyparsing=2.4.2=py_0
- pyqt=5.9.2=py27h22d08a2_1
- python=2.7.15=h5a48372_1009
- python-dateutil=2.8.0=py27_0
- pytz=2019.3=py_0
- qt=5.9.7=h0c104cb_3
- quast=4.1=py27_0
- racon=1.4.0=he860b03_0
- readline=8.0=hf8c457e_0
- seqtk=1.3=hed695b0_2
- setuptools=41.2.0=py27_0
- singledispatch=3.4.0.3=py27_0
- sip=4.19.13=py27he6710b0_0
- six=1.12.0=py27_0
- sqlite=3.29.0=hcee41ef_1
- subprocess32=3.5.4=py27h7b6447c_0
- tk=8.6.9=hed695b0_1003
- tornado=5.1.1=py27h7b6447c_0
- wheel=0.33.6=py27_0
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.8=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-libxt=1.2.0=h516909a_0
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.4=h14c3975_1001
- zlib=1.2.11=h516909a_1006
- zstd=1.4.0=h3b9ef0a_0
prefix: /processing_Data/bioinformatics/pipelines/miniconda3/envs/nanopore