diff --git a/bu_isciii/templates/services.json b/bu_isciii/templates/services.json
index 7c8049fe..abb0a1a2 100755
--- a/bu_isciii/templates/services.json
+++ b/bu_isciii/templates/services.json
@@ -76,7 +76,7 @@
         "description": "Multilocus sequence typing (MLST) using Taranis",
         "depends_on": "assembly_annotation",
         "clean": {
-          "folders":["03-assembly/trimming/trimmed", "01-preprocessing"],
+          "folders":[],
           "files":[]
         },
         "no_copy": ["RAW", "TMP"],