From e01caba55f0aac689a57ca9e42e0d4c00b76dbfe Mon Sep 17 00:00:00 2001 From: svarona Date: Tue, 25 Jun 2024 17:44:34 +0200 Subject: [PATCH] Updated changelog --- CHANGELOG.md | 3 +++ 1 file changed, 3 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 3d378aa4..f9a97e31 100755 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -48,6 +48,7 @@ Code contributions to the new version: - Fixed singularity-images path when updating pangolin database in lablog_viralrecon. Added line break after prompted input. [#282](https://github.com/BU-ISCIII/buisciii-tools/pull/282) - Updated characterization and snippy templates to fit bacass pipeline. Corrected path in 05-iqtree in snippy template. [#283](https://github.com/BU-ISCIII/buisciii-tools/pull/283) - Included multiqc_report.html in RESULTS folder in every service, where necessary [#265] (https://github.com/BU-ISCIII/buisciii-tools/pull/265) +- Added MAG tempalte and removed MAG from other templates [#288](https://github.com/BU-ISCIII/buisciii-tools/pull/288) ### Modules @@ -55,6 +56,7 @@ Code contributions to the new version: - PR [#274](https://github.com/BU-ISCIII/buisciii-tools/pull/274): added `--dev` option, configuration dev and test folder structure. - PR [#276](https://github.com/BU-ISCIII/buisciii-tools/pull/276): wkhtmlpdf does not need absolute path to executable. Added better error handling when executable does not exists. +- PR [#288](https://github.com/BU-ISCIII/buisciii-tools/pull/288) Allowed to handle more than one service at a time, related to issue [#217](https://github.com/BU-ISCIII/buisciii-tools/issues/217) #### Fixes @@ -62,6 +64,7 @@ Code contributions to the new version: - Fixed clean module. Corrected purge_files function. Renaming stage moved from clean to rename_nocopy option. Updated services.json file with correct paths for some services. [#280](https://github.com/BU-ISCIII/buisciii-tools/pull/280) - Fixed autoclean-sftp function. [#281](https://github.com/BU-ISCIII/buisciii-tools/pull/281) - Fixed bioinfo_doc.py. Modified it so that this module creates a .pdf file including new-line characters, without merging lines into one single line [#259](https://github.com/BU-ISCIII/buisciii-tools/pull/259). +- PR [#288](https://github.com/BU-ISCIII/buisciii-tools/pull/288) Fixed updating service's state to in_progress multiple times, related with issue [#285](https://github.com/BU-ISCIII/buisciii-tools/issues/285) #### Changed