From 059be535cb8b3f8d6a14f88c8becdd5a2e6006a3 Mon Sep 17 00:00:00 2001 From: Vedanth Date: Tue, 8 Oct 2024 10:40:00 +0530 Subject: [PATCH] ENH update argNorm overview figure with high quality SVG pill icons as used in manuscript --- docs/images/argnorm_overview.svg | 1417 ++++++++++++++++-------------- 1 file changed, 768 insertions(+), 649 deletions(-) diff --git a/docs/images/argnorm_overview.svg b/docs/images/argnorm_overview.svg index 80af9af..ab6445c 100644 --- a/docs/images/argnorm_overview.svg +++ b/docs/images/argnorm_overview.svg @@ -2,22 +2,22 @@ - - - - - - - - - - Genomes and - - is_anaming (argNorm input) - - - - - - - - - aGenomes andmetagenomes - - ARG annotation - hAMRonization - ResFinder - DeepARG - ARGs-OAP - ABRicate - AMRFinderPlus - - - - - - - - - argNorm: normalization - - - a - b - ARG annotationInconsistent gene - - Mapping gene ARO - Mapping drugs to - accession to drugs - ABRicateAMRFinderPlusARGs-OAPDeepARGGROOTResFinderARO:3000230 - - - - drug classes - - - - metagenomes - and drug categorization - hAMRonization - - - - argNorm: normalizationand drug categorizationb - - Inconsistent gene ANT(2")-Iaant(2")-Iaant(2")-Inaming (argNorm input) - Mapping gene names - (AGly)aadBto ARO - ANT(2")-Ia - ant(2")-Ia - ant(2")-I - (AGly)aadB - ANT2-DPRIME - ANT2-DPRIME2"-aminoglycoside - 2"-aminoglycosidenucleotidyltransferase - aminoglycoside antibiotic - antibiotic molecule - tobramycin - confers_resistance_to_antibiotic - is_a - is_a - - - - - - - - GR - nucleotidyltransferaseGROOT - - + id="tspan24" + style="font-size:2.82222px;stroke-width:0.108" + x="-139.69409" + y="72.821869">Mapping gene names ARO:3000230confers_resistance_to_antibiotictobramycinMapping gene AROaccession to drugsMapping drugs todrug classesantibiotic moleculeis_aaminoglycoside antibiotic + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +