https://docs.conda.io/projects/conda/en/latest/user-guide/install/linux.html
Disable conda environment on startup (optional)
conda config --set auto_activate_base false
Useful commands
# create environment
conda create -n biological_data
# list environments
conda env list
# activate/deactivate your environment
conda activate biological_data
conda deactivate
# info about the current environment
conda info
# display all packages in your environment
conda list
# install jupyter notebook
conda install -c conda-forge notebook
# launch notebook
jupyter notebook
# remove environment
conda env remove -n biological_data
# clone conda environment
conda create --name biological_data_new --clone biological_data
This installs a precompiled version of Blast+ for Linux x64. Other versions are available, including Windows and MacOS
(~250 Mb)
wget ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.12.0+-x64-linux.tar.gz
tar -xzf ncbi-blast-2.12.0+-x64-linux.tar.gz
(~18 Mb)
wget http://eddylab.org/software/hmmer/hmmer.tar.gz
tar -xzf hmmer.tar.gz
./configure
make