Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Undocumented dependency on IPython #202

Open
jakebeal opened this issue Jul 21, 2023 · 0 comments
Open

Undocumented dependency on IPython #202

jakebeal opened this issue Jul 21, 2023 · 0 comments
Labels
bug Something isn't working critical High priority issue

Comments

@jakebeal
Copy link
Member

While testing a fresh install of labop to help out with #200, I discovered that there is now an undocumented dependency for labop on the IPython module. This should be added to the dependencies in setup or expunged.

Here is the error:

>>> import labop
/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/sbol3/object.py:70: UserWarning: Using a default namespace. To set a namespace use set_namespace()
  warnings.warn('Using a default namespace.'
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/labop/__init__.py", line 18, in <module>
    from labop.data import *
  File "/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/labop/data.py", line 13, in <module>
    from labop_convert.plate_coordinates import coordinate_rect_to_row_col_pairs, coordinate_to_row_col
  File "/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/labop_convert/__init__.py", line 3, in <module>
    from labop_convert.markdown.markdown_specialization import MarkdownSpecialization
  File "/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/labop_convert/markdown/__init__.py", line 1, in <module>
    from .protocol_to_markdown import MarkdownConverter
  File "/Library/Frameworks/Python.framework/Versions/3.10/lib/python3.10/site-packages/labop_convert/markdown/protocol_to_markdown.py", line 7, in <module>
    from IPython.display import Markdown
ModuleNotFoundError: No module named 'IPython'
@jakebeal jakebeal added bug Something isn't working critical High priority issue labels Jul 21, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working critical High priority issue
Projects
None yet
Development

No branches or pull requests

1 participant