pyproject.toml

[project]
name = "flair"
version = "2.1.0a"
description = "FLAIR is a long-read transcriptomics model building and analysis package"
authors = [
    {name = "Angela Brooks", email = "anbrooks@ucsc.edu"},
    {name = "Alison Tang"},
    {name = "Jeltje van Baren", email = "jeltje.van.baren@gmail.com"},
    {name = "Colette Felton", email = "cafelton@ucsc.edu"},
    {name = "Cameron M. Soulette"},
    {name = "Mark Diekhans", email = "markd@ucsc.edu"}
]
license = {text = "BSD 3-clause"}
readme = "README.md"
requires-python = "=3.12.*"
dependencies = [
    "pysam (>=0.22.1,<0.23.0)",
    "pipettor (>=1.0.0,<2.0.0)",
    "pybedtools (>=0.11.0,<0.12.0)",
    "ncls (>=0.0.68,<0.0.69)",
    "setuptools (>=75.8.0,<76.0.0)",
    "mappy (>=2.28,<3.0)",
    "scipy (>=1.15.1,<2.0.0)",
    "pandas (>=2.2.3,<3.0.0)",
    "matplotlib (>=3.10.0,<4.0.0)",
    "seaborn (>=0.13.2,<0.14.0)",
    "rpy2 (>=3.5.17,<4.0.0)"
]


[build-system]
requires = ["poetry-core>=2.0.0,<3.0.0"]
build-backend = "poetry.core.masonry.api"

[tool.poetry.group.dev.dependencies]
flake8 = "^7.1.1"