Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Data set handling #4

Open
MohammadSalehi72 opened this issue Nov 4, 2022 · 0 comments
Open

Data set handling #4

MohammadSalehi72 opened this issue Nov 4, 2022 · 0 comments

Comments

@MohammadSalehi72
Copy link

MohammadSalehi72 commented Nov 4, 2022

Dear Kevin,

Recently I've tried to use your repository, but I have some issues with dataset directories,
Here are some codes that you write for explanations:
""" dataset
structures = ["Heart", "Breast L", "Breast R"]
dataset = Dataset('data/data', 'data/DIBH_dataset', structures)
dataset.make()"""
I've added the above directories for CT images and related RT structure, but it returned an empty patient as below:

Structure(s) to export: ['Bladder', 'Femur_L', 'Femur_R', 'LN_Pelvis', 'Prostate', 'Rectum', 'SeminalVesicles']
Patient(s) identification : []
Export done

Could you please explain more about "dataset = Dataset('data/data', 'data/DIBH_dataset', structures)"?
And could you please tell me what structure the dataset should have?

Thank you.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant