From c27642208bb99cfff0da4687f8780d399cd87c19 Mon Sep 17 00:00:00 2001
From: shac170 <cashaw4@ncsu.edu>
Date: Fri, 26 Apr 2024 13:17:46 -0700
Subject: [PATCH] Added documentation for dd and reorganized other docs

---
 docs/source/pythonapi/index.rst | 28 ++++++++++++++--------------
 mcdc/input_.py                  | 26 +++++++++++++++++++++-----
 2 files changed, 35 insertions(+), 19 deletions(-)

diff --git a/docs/source/pythonapi/index.rst b/docs/source/pythonapi/index.rst
index 31a5e32f..3e532e0c 100644
--- a/docs/source/pythonapi/index.rst
+++ b/docs/source/pythonapi/index.rst
@@ -27,12 +27,10 @@ Defining geometry
    :nosignatures:
    :template: omcfunction.rst
 
-   mcdc.surface
    mcdc.cell
-   mcdc.universe
    mcdc.lattice
-   
-
+   mcdc.surface
+   mcdc.universe
 
 Defining simulation
 -------------------
@@ -42,12 +40,10 @@ Defining simulation
    :nosignatures:
    :template: omcfunction.rst
 
-   mcdc.source
-   mcdc.tally
    mcdc.eigenmode
    mcdc.setting
-
-
+   mcdc.source
+   mcdc.tally
 
 Defining techniques
 -------------------
@@ -57,16 +53,20 @@ Defining techniques
    :nosignatures:
    :template: omcfunction.rst
 
+   mcdc.branchless_collision
+   mcdc.domain_decomposition
+   mcdc.dsm
+   mcdc.IC_generator
+   mcdc.iQMC
    mcdc.implicit_capture
-   mcdc.weighted_emission
    mcdc.population_control
-   mcdc.branchless_collision
    mcdc.time_census
-   mcdc.weight_window
-   mcdc.iQMC
+   mcdc.weighted_emission
    mcdc.weight_roulette
-   mcdc.IC_generator
-   mcdc.dsm
+   mcdc.weight_window
+
+
+
 
 
 
diff --git a/mcdc/input_.py b/mcdc/input_.py
index 0531ba11..a5056643 100644
--- a/mcdc/input_.py
+++ b/mcdc/input_.py
@@ -1392,12 +1392,31 @@ def domain_decomposition(
     x=None,
     y=None,
     z=None,
-    t=None,
     exchange_rate=100,
-    bank_size=1e5,
     work_ratio=None,
     repro=True,
 ):
+    """
+    Activate domain decomposition.
+
+    Parameters
+    ----------
+    x : array_like[float], optional
+        Location of subdomain boundaries in x (default None).
+    y : array_like[float], optional
+        Location of subdomain boundaries in y (default None).
+    z : array_like[float], optional
+        Location of subdomain boundaries in z (default None).
+    exchange_rate : float, optional
+        number of particles to acumulate in the domain banks before sending.
+    work_ratio : array_like[integer], optional
+        Inte
+
+    Returns
+    -------
+        A domain decomposition card.
+
+    """
     card = mcdc.input_deck.technique
     card["domain_decomposition"] = True
     card["domain_bank_size"] = int(1e5)
@@ -1414,9 +1433,6 @@ def domain_decomposition(
     if z is not None:
         card["dd_mesh"]["z"] = z
         dom_num += len(z)
-    if t is not None:
-        card["dd_mesh"]["t"] = t
-        dom_num += len(t)
     # Set work ratio
     if work_ratio is None:
         card["dd_work_ratio"] = None