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IFP_generation_dissociation_trajectories #12

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AmyOo312 opened this issue Mar 8, 2024 · 1 comment
Open

IFP_generation_dissociation_trajectories #12

AmyOo312 opened this issue Mar 8, 2024 · 1 comment

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@AmyOo312
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AmyOo312 commented Mar 8, 2024

Hello,

I was trying to generate IFP for my dissociation trajectories and I am facing this error. If you have any ideas how I could fix this problem, please let me know.

Thank you.

total number of frames= 526; file size 823 M

sub-system selected protein or (resname HOH WAT SOL) or (resname 9JU302)
Warning: Failed to read this trajectory

ERROR: IFP either were not generated or could not be stored in the traj object!

= 19 F10_001_40_40_p//RAMD\9.dcd
total number of frames= 607; file size 950 M
sub-system selected protein or (resname HOH WAT SOL) or (resname 9JU302)
Warning: Failed to read this trajectory

ERROR: IFP either were not generated or could not be stored in the traj object!

++++Will be saved +++++ ['RAMD']
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
ERROR: failed to save properties for the replica RAMD since the trajectiry was not analyzed
Traceback (most recent call last):
File "D:\XX\XX\ifp_generation.py", line 43, in
tr.ramd.IFP_save(tr.PRJ_DIR+name+"_RAMD_com.pkl")
File "D:\XX\XX\Scripts\Trajectories.py", line 584, in IFP_save
df1.to_pickle(file)
AttributeError: 'NoneType' object has no attribute 'to_pickle'

@haoxuanluo731
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I also find this problem,I want to know whether you have solve it

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