updated on Dec 27 2018
Title: HiFreSP: A novel high-frequency sub-pathway mining approach to identify robust prognostic gene signatures
Author: Chunquan Li
Email: [email protected]
Description: A novel High-Frequency Sub-Pathways mining approach (HiFreSP) to identify robust prognosis gene signatures. The High- Frequency Genes (HFG) and the High-Frequency Pathways (HFP) scores were calculated to mine the prognosis-related sub-pathways, and this method provided the robustness to the noise of the training set and prevent over fit (see details in ‘Materials and Methods’ section of the paper).
Depends: R (2.15.2), igraph R package, iSubpathwayMiner R package, survival package