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I'm trying to run phyloflash on a MacOS and having an issue while trying to create the initial database.
It gets through to the bowtie build step and then gives the following error:
running subcommand:
/opt/anaconda3/envs/pf/bin/bowtie-build
./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.fasta
./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.bt -q
2>tmp.bowtiebuild.log
sh: line 1: 78886 Abort trap: 6 /opt/anaconda3/envs/pf/bin/bowtie-build ./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.fasta ./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.bt -q 2> tmp.bowtiebuild.log
[14:57:38] FATAL: Tool execution failed!.
Error was 'No such file or directory' and return code '34304'
Check error log file tmp.bowtiebuild.log
Aborting.
[14:57:38] Saving log to file phyloFlash_log_on_error
Here is the information provided in the bowtiebuild.log file:
dyld: Library not loaded: @rpath/libtbb.dylib
Referenced from: /opt/anaconda3/envs/pf/bin/bowtie-build-s
Reason: image not found
If anybody could please advise on how to solve this issue that would be GREATLY appreciated :)
Thanks,
Syrena
The text was updated successfully, but these errors were encountered:
Hi there,
I'm trying to run phyloflash on a MacOS and having an issue while trying to create the initial database.
It gets through to the bowtie build step and then gives the following error:
running subcommand:
/opt/anaconda3/envs/pf/bin/bowtie-build
./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.fasta
./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.bt -q
2>tmp.bowtiebuild.log
sh: line 1: 78886 Abort trap: 6 /opt/anaconda3/envs/pf/bin/bowtie-build ./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.fasta ./138.1/SILVA_SSU.noLSU.masked.trimmed.NR96.fixed.bt -q 2> tmp.bowtiebuild.log
[14:57:38] FATAL: Tool execution failed!.
Error was 'No such file or directory' and return code '34304'
Check error log file tmp.bowtiebuild.log
Aborting.
[14:57:38] Saving log to file phyloFlash_log_on_error
Here is the information provided in the bowtiebuild.log file:
dyld: Library not loaded: @rpath/libtbb.dylib
Referenced from: /opt/anaconda3/envs/pf/bin/bowtie-build-s
Reason: image not found
If anybody could please advise on how to solve this issue that would be GREATLY appreciated :)
Thanks,
Syrena
The text was updated successfully, but these errors were encountered: