octave should have matching compilers availble

[dasergatskov]

brew gist-logs <formula> link OR brew config AND brew doctor output

% brew config
HOMEBREW_VERSION: 4.4.12
ORIGIN: https://github.com/Homebrew/brew
HEAD: 3001afe88112c13b5aafdd92e097680897060881
Last commit: 24 hours ago
Branch: stable
Core tap JSON: 16 Dec 15:42 UTC
Core cask tap JSON: 16 Dec 15:42 UTC
HOMEBREW_PREFIX: /opt/homebrew
HOMEBREW_CASK_OPTS: []
HOMEBREW_MAKE_JOBS: 14
Homebrew Ruby: 3.3.6 => /opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.3.6/bin/ruby
CPU: 14-core 64-bit arm_brava
Clang: 16.0.0 build 1600
Git: 2.39.5 => /Applications/Xcode.app/Contents/Developer/usr/bin/git
Curl: 8.7.1 => /usr/bin/curl
macOS: 15.2-arm64
CLT: 16.2.0.0.1.1733547573
Xcode: 16.2
Rosetta 2: false

Verification

• My brew doctor output says Your system is ready to brew. and am still able to reproduce my issue.
• I ran brew update and am still able to reproduce my issue.
• I have resolved all warnings from brew doctor and that did not fix my problem.
• I searched for recent similar issues at https://github.com/Homebrew/homebrew-core/issues?q=is%3Aissue and found no duplicates.

What were you trying to do (and why)?

For users to be able to install octave packages, the octave should be compiled with the same C/C+++/Fortran compilers
as on their systems. Currently there is a mismatch (at least for darwin24 systems), see e.g.
Homebrew/brew#18943 (comment)

What happened (include all command output)?

octave:1> pkg install -forge -verbose control
downloading tarball(s) from:
- https://packages.octave.org/download/control-4.1.0.tar.gz
mkdir (/var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T/oct-fvBVdD)
untar (/var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T/control-4.1.0-JcHsDy.tar.gz, /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T/oct-fvBVdD)
checking for mkoctfile... /opt/homebrew/Cellar/octave/9.3.0/bin/mkoctfile-9.3.0 --verbose
checking for octave-config... /opt/homebrew/Cellar/octave/9.3.0/bin/octave-config-9.3.0
...<deleted>...
clang++ -std=gnu++17 -c  -fPIC -I/opt/homebrew/Cellar/octave/9.3.0/include/octave-9.3.0/octave/.. -I/opt/homebrew/Cellar/octave/9.3.0/include/octave-9.3.0/octave -I/opt/homebrew/Cellar/octave/9.3.0/include  -pthread -g -O2  -Wall -Wno-deprecated-declarations   common.cc -o /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T//oct-DD7Qiz.o
clang++ -std=gnu++17 -I/opt/homebrew/Cellar/octave/9.3.0/include/octave-9.3.0/octave/.. -I/opt/homebrew/Cellar/octave/9.3.0/include/octave-9.3.0/octave -I/opt/homebrew/Cellar/octave/9.3.0/include  -pthread -g -O2  -Wall -Wno-deprecated-declarations -o __control_slicot_functions__.oct  /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T//oct-pYUwFC.o /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T//oct-DD7Qiz.o  slicotlibrary.a  -bundle -undefined dynamic_lookup -bind_at_load -bundle_loader /opt/homebrew/Cellar/octave/9.3.0/bin/octave-9.3.0 -L/opt/homebrew/Cellar/octave/9.3.0/lib/octave/9.3.0 -L/opt/homebrew/Cellar/octave/9.3.0/lib -bundle -undefined dynamic_lookup -bind_at_load -bundle_loader /opt/homebrew/Cellar/octave/9.3.0/bin/octave-9.3.0  -L/opt/homebrew/opt/openblas/lib -lopenblas  -L/opt/homebrew/opt/gcc/bin/../lib/gcc/current/gcc/aarch64-apple-darwin23/14 -L/opt/homebrew/opt/gcc/bin/../lib/gcc/current/gcc -L/opt/homebrew/opt/gcc/bin/../lib/gcc/current/gcc/aarch64-apple-darwin23/14/../../.. -lemutls_w -lheapt_w -lgfortran -lquadmath   -loctinterp -loctave
ld: warning: duplicate -bundle_loader option, '/opt/homebrew/Cellar/octave/9.3.0/bin/octave-9.3.0' ignored
ld: warning: search path '/opt/homebrew/opt/gcc/bin/../lib/gcc/current/gcc/aarch64-apple-darwin23/14' not found
ld: warning: search path '/opt/homebrew/opt/gcc/bin/../lib/gcc/current/gcc/aarch64-apple-darwin23/14/../../..' not found
ld: library 'emutls_w' not found
clang++: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [__control_slicot_functions__.oct] Error 1

error: pkg: error running 'make' for the control package
error: called from
    configure_make at line 117 column 9
    install at line 202 column 7
    pkg at line 619 column 9
octave:2> 

What did you expect to happen?

With self-compiled octave binary on the same system, it works fine:

clang++ -std=gnu++17 -I/usr/local/include/octave-10.0.0/octave/.. -I/usr/local/include/octave-10.0.0/octave -I/usr/local/include  -pthread -ggdb3 -O2 -march=native -mcpu=native -flto=thin  -Wall -Wno-deprecated-declarations -o __control_slicot_functions__.oct  /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T//oct-wQ6p9k.o /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T//oct-zBcofN.o  slicotlibrary.a  -bundle -undefined dynamic_lookup -bind_at_load  -L/usr/local/lib -bundle -undefined dynamic_lookup -bind_at_load  -L/opt/homebrew/opt/openblas/lib -lopenblas  -L/opt/homebrew/lib -L/opt/homebrew/Cellar/gcc/14.2.0_1/bin/../lib/gcc/current/gcc/aarch64-apple-darwin24/14 -L/opt/homebrew/Cellar/gcc/14.2.0_1/bin/../lib/gcc/current/gcc -L/opt/homebrew/Cellar/gcc/14.2.0_1/bin/../lib/gcc/current/gcc/aarch64-apple-darwin24/14/../../.. -lemutls_w -lheapt_w -lgfortran -lquadmath  -L/opt/homebrew/lib -bundle_loader /usr/local/bin/octave-10.0.0
copyfile /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T/oct-rC69gC/control-4.1.0/src/__control_helper_functions__.oct /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T/oct-rC69gC/control-4.1.0/src/__control_slicot_functions__.oct /var/folders/ds/5xsh6x4914x78jswflyz20c40000gn/T/oct-rC69gC/control-4.1.0/inst/aarch64-apple-darwin24.1.0-api-v59
The control package was installed into the directory
/Users/dmitri/.local/share/octave/api-v59/packages/control-4.1.0.

Step-by-step reproduction instructions (by running brew commands)

see above

[carlocab]

Can you try doing

/usr/bin/sed -i '' \
  's/aarch64-apple-darwin23/aarch64-apple-darwin24/g' \
  "$(brew --prefix octave)/lib/pkgconfig/octave.pc"

and see if it helps?

[dasergatskov]

I tried it. Does not change anything.

[carlocab]

Yes, looks like the flags are baked into mkoctfile. You'll probably need to rebuild octave from source with something like

brew reinstall --build-from-source octave

[dasergatskov]

Yes, the paths are built into mkoctfile. I can build octave from source, though brew reinstall --build-from-source octave does not seem to be doing it.

[jgenc]

Had the exact same issue. Tried the solution @carlocab suggested, thankfully it worked for me. Not sure why however.

[mmuetzel]

mkoctfile retains some compiler and linker flags with which it was built as the default flags when it is calling a compiler or linker. That is a sensible default for most distributions.
If I understand correctly, it is not for Homebrew. Is that true?

Since the linker flags contain references to gcc, I'm assuming they might be inherited from the Fortran compiler (iiuc, that is gfortran). I could be wrong about that though.
Homebrew users can override those flags on runtime, e.g., by setting the environment variable FLIBS=" " (or by setting FLIBS to whichever Fortran library flags need to be used) while they run mkoctfile.

Does that work?

[lmem]

Just signed in here to say thanks for all your efforts and to mention that I had the same issue and the suggestion by @carlocab to build from source also worked for me. (I spent an hour or two searching various forum prior to finding this too!)

I wonder if this is a result of upgrading from an Intel Mac to a Apple Silicon Mac and importing the old user? The installation paths seem to have changed between the two?

Part of my cure was to completely remove homebrew and all references to it everywhere, then reinstalled homebrew and found the issue with octave continued. So I then tried compiling octave from source and it seems to have worked. At least I now have the signal and control pkg's installed which is all I wanted!

Will also mention that building octave from source took much longer than expected, so don't get impatient when it looks like it has stalled!