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Just a minor suggestion for the convenience of use of the Docker Image.
I pulled it as a Singularity image on our cluster. Inside the container there was no Python on the $PATH. It took me a while to look around what is where until I could run source /usr/local/bin/_activate_current_env.sh . It would be convenient to have the environment already initialized.
Please correct me if I missed something.
Thank you!
Petr
The text was updated successfully, but these errors were encountered:
KoubaPetr
changed the title
Docker image with initialized environment
Request: Docker image with initialized environment
Feb 29, 2024
Very good point - thank you Petr for noticing this issue and reporting it.
Uninitialized docker environment does pose some challenges when running it with singularity and I was able to reproduce the issue.
Hi,
thank you for providing the package!
Just a minor suggestion for the convenience of use of the Docker Image.
I pulled it as a Singularity image on our cluster. Inside the container there was no Python on the $PATH. It took me a while to look around what is where until I could run
source /usr/local/bin/_activate_current_env.sh
. It would be convenient to have the environment already initialized.Please correct me if I missed something.
Thank you!
Petr
The text was updated successfully, but these errors were encountered: