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How can I download "INDEX_core_data.2016" from PDBbind_2016_plain_text_index? #10

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SeunghanSNU opened this issue Jan 24, 2022 · 1 comment
Open

How can I download "INDEX_core_data.2016" from PDBbind_2016_plain_text_index? #10

SeunghanSNU opened this issue Jan 24, 2022 · 1 comment

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@SeunghanSNU
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SeunghanSNU commented Jan 24, 2022 •
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From FAST/data_util/parse_affinity_data.sh, you use the code "
grep -v '#' $path/PDBbind_2016_plain_text_index/index/INDEX_core_data.2016 | cut -f 1 -d ' ' > core.csv"

But, I can't find that "INDEX_core_data.2016" from PDBbind_2016_plain_text_index

I think that is missing,, There is no that file on PDBbind dataset v2016,, What should I do?
@hkimdavis
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It would be included in PDBBind CASF-2016 dataset.

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@hkimdavis @SeunghanSNU