From b99d67e8e36c93acf9730be68fecfdeebc2cdc7e Mon Sep 17 00:00:00 2001 From: Josh Meyers Date: Fri, 1 Mar 2024 15:01:12 -0800 Subject: [PATCH] Add sensor height map to batoid telescope model --- data/fp_height_map.ecsv | 222 ++++++++++++++++++++++++ devel-tools/fp_height/plot_fp_height.py | 73 ++++++++ imsim/telescope_loader.py | 50 +++++- tests/test_telescope_loader.py | 40 +++++ 4 files changed, 382 insertions(+), 3 deletions(-) create mode 100644 data/fp_height_map.ecsv create mode 100644 devel-tools/fp_height/plot_fp_height.py diff --git a/data/fp_height_map.ecsv b/data/fp_height_map.ecsv new file mode 100644 index 00000000..f07b5512 --- /dev/null +++ b/data/fp_height_map.ecsv @@ -0,0 +1,222 @@ +# %ECSV 1.0 +# --- +# datatype: +# - {name: DET_NAME, datatype: string} +# - {name: ORIGIN_X, unit: mm, datatype: float64, description: X_CCS coordinate of Zernike function origin} +# - {name: ORIGIN_Y, unit: mm, datatype: float64, description: Y_CCS coordinate of Zernike function origin} +# - {name: MIN_X, unit: mm, datatype: float64, description: Minimum X_CCS coordinate of sensor} +# - {name: MAX_X, unit: mm, datatype: float64, description: Maximum X_CCS coordinate of sensor} +# - {name: MIN_Y, unit: mm, datatype: float64, description: Minimum Y_CCS coordinate of sensor} +# - {name: MAX_Y, unit: mm, datatype: float64, description: Maximum Y_CCS coordinate of sensor} +# - {name: R_OUTER, unit: mm, datatype: float64, description: Circular Zernike radius} +# - {name: ZK, unit: mm, datatype: string, description: 'Circular Zernike coefficient starting at j=0. I.e., ZK[0] is meaningless, ZK[1] +# is piston, ZK[4] is focus, ...', subtype: 'float64[29]'} +# meta: !!omap +# - {description: 'Values from Document-37242, cold_a_BOT_metro_cold_L3flat_200805a_full_55_200807001609 dataset.'} +# schema: astropy-2.0 +DET_NAME ORIGIN_X ORIGIN_Y MIN_X MAX_X MIN_Y MAX_Y R_OUTER ZK +R00_SG1 -212.238 -258.738 -232.1109 -192.3651 -278.9882 -238.488 29.69848 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[1.493355631828308,1.493355631828308,0.005997140426188707,0.000780877482611686,-0.005533435847610235,-0.004822717979550362,-0.0015056519769132137,0.0011097303358837962,0.005679036490619183,-0.0017852484015747905,0.00880200881510973,-0.0002812186721712351,-0.0006693920004181564,-0.00037251596222631633,0.005082536023110151,0.0015341860707849264,0.0010229033650830388,0.0003001617733389139,0.00236526713706553,-0.0003708292788360268,0.0015881604049354792,-8.924955182010308e-05,-0.00010507137631066144,-0.00013282473082654178,-6.923737237229943e-05,-4.380913651402807e-06,0.0009960558963939548,0.00579382199794054,-0.0019022286869585514] diff --git a/devel-tools/fp_height/plot_fp_height.py b/devel-tools/fp_height/plot_fp_height.py new file mode 100644 index 00000000..93a7ca72 --- /dev/null +++ b/devel-tools/fp_height/plot_fp_height.py @@ -0,0 +1,73 @@ +import numpy as np +from lsst.obs.lsst import LsstCam +from lsst.afw.cameraGeom import FOCAL_PLANE +import imsim +import matplotlib.pyplot as plt + +def colorbar(mappable): + from mpl_toolkits.axes_grid1 import make_axes_locatable + import matplotlib.pyplot as plt + last_axes = plt.gca() + ax = mappable.axes + fig = ax.figure + divider = make_axes_locatable(ax) + cax = divider.append_axes("right", size="5%", pad=0.05) + cbar = fig.colorbar(mappable, cax=cax) + plt.sca(last_axes) + return cbar + +camera = LsstCam().getCamera() + +det_telescope = imsim.DetectorTelescope( + "LSST_r.yaml", + fp_height_file_name="fp_height_map.ecsv", +) + +x = [] +y = [] +z = [] +for det in camera: + corners = det.getCorners(FOCAL_PLANE) + xmin = min(corner.getX() for corner in corners) + xmax = max(corner.getX() for corner in corners) + ymin = min(corner.getY() for corner in corners) + ymax = max(corner.getY() for corner in corners) + + # Transpose DVCS => CCS + xmin, ymin = ymin, xmin + xmax, ymax = ymax, xmax + + xs = np.linspace(xmin, xmax, 10) + ys = np.linspace(ymin, ymax, 10) + xs, ys = np.meshgrid(xs, ys) + + # Build the det_telescope + z_offset = det_telescope.calculate_z_offset(det.getName()) + height_map = det_telescope.calculate_height_map(det.getName()) + telescope = det_telescope.get_telescope(z_offset, height_map) + zs = telescope['Detector'].surface.sag(xs*1e-3, ys*1e-3) + + x.append(xs) + y.append(ys) + z.append(zs) + +x = np.array(x) # Already in mm +y = np.array(y) +z = np.array(z)*1e6 # Convert to micron + +# Remove WF sensor 1.5 mm offsets for plot +z[z > 1000] -= 1500 +z[z < -1000] += 1500 + +# vmax = np.quantile(z, 0.95) +vmax = 15.0 + +# To compare with Document-37242, we plot X_CCS on the Y axis, +# Y_CCS on the X axis, and heights in -Z_CCS. +plt.figure(figsize=(10, 10)) +colorbar(plt.scatter(y, x, c=-z, vmin=-vmax, vmax=vmax, cmap='jet', s=5)) +plt.title("Height Map (micron)") +plt.xlabel("Y_CCS (mm)") +plt.ylabel("X_CCS (mm)") +plt.savefig("fp_height_map.png", dpi=300) + diff --git a/imsim/telescope_loader.py b/imsim/telescope_loader.py index b6ae521a..e76f1d52 100644 --- a/imsim/telescope_loader.py +++ b/imsim/telescope_loader.py @@ -7,6 +7,10 @@ import batoid from collections.abc import Sequence from .camera import get_camera +from astropy.table import Table +from pathlib import Path +from .meta_data import data_dir +import numpy as np def parse_xyz(xyz, base): @@ -357,6 +361,7 @@ class DetectorTelescope: 'rotTelPos': Angle, 'camera': str, 'focusZ': float, + 'fp_height_file_name': str, } def __init__( @@ -368,6 +373,7 @@ def __init__( builder_kwargs=None, fea_perturbations=None, focusZ=None, + fp_height_file_name=None, logger=None ): # Batoid has a different name for LsstCam than DM code. So we need to switch it here. @@ -390,13 +396,31 @@ def __init__( self.camera = camera self.logger = logger - def get_telescope(self, z_offset): + if fp_height_file_name is not None: + if not Path(fp_height_file_name).is_file(): + # Check if file is in data_dir. + data_file = Path(data_dir) / fp_height_file_name + if not data_file.is_file(): + raise OSError(f"Focal plane height data file {fp_height_file_name} not found.") + else: + data_file = fp_height_file_name + self.fp_height_table = Table.read(data_file) + else: + self.fp_height_table = None + + def get_telescope(self, z_offset, height_map=None): """Get a potentially detector-shifted version of the telescope with the given z_offset. """ - return self.fiducial.withLocallyShiftedOptic( + shifted = self.fiducial.withLocallyShiftedOptic( "Detector", [0, 0, -z_offset] # batoid convention is opposite of DM ) + if height_map is not None: + shifted = shifted.withPerturbedSurface( + "Detector", + height_map + ) + return shifted def calculate_z_offset(self, det_name): camera = get_camera(self.camera) @@ -408,6 +432,25 @@ def calculate_z_offset(self, det_name): z_offset = 0 return z_offset + def calculate_height_map(self, det_name): + if self.fp_height_table is None: + return None + idx = np.where(self.fp_height_table['DET_NAME'] == det_name)[0] + if len(idx) == 0: + self.logger.warn( + f"No focal plane height data found for detector {det_name}." + ) + return None + row = self.fp_height_table[idx[0]] + height_map = batoid.Zernike( + -row['ZK']*1e-3, # Height map coord sys is opposite of Z_CCS + R_outer=row['R_OUTER']*1.0e-3, + x_origin=row['ORIGIN_X']*1.0e-3, + y_origin=row['ORIGIN_Y']*1.0e-3 + ) + return height_map + + class TelescopeLoader(InputLoader): """Load a telescope from a yaml file. """ @@ -451,7 +494,8 @@ def setupImage(self, input_obj, config, base, logger=None): det_name = GetCurrentValue('image.det_name', base) logger.info('Setting up det_telescope for detector %s', det_name) z_offset = input_obj.calculate_z_offset(det_name) - det_telescope = input_obj.get_telescope(z_offset) + height_map = input_obj.calculate_height_map(det_name) + det_telescope = input_obj.get_telescope(z_offset, height_map) else: det_telescope = input_obj.get_telescope(0) base['det_telescope'] = det_telescope diff --git a/tests/test_telescope_loader.py b/tests/test_telescope_loader.py index 075ac6c2..b696d558 100644 --- a/tests/test_telescope_loader.py +++ b/tests/test_telescope_loader.py @@ -662,6 +662,7 @@ def test_config_fea_file_num(): assert configd == reference + def test_config_focus_z(): """Test that focusZ is properly set from configs.""" @@ -695,9 +696,48 @@ def test_config_focus_z(): assert shifted_ref == focusz_shifted_config +def test_config_fp_height(): + """Test that focal plane height is properly set from configs.""" + + config = textwrap.dedent( + """ + input: + telescope: + file_name: LSST_r.yaml + fp_height_file_name: fp_height_map.ecsv + image: + det_name: R11_S01 + """ + ) + + config = yaml.safe_load(config) + galsim.config.ProcessInput(config) + focusz_shifted_config = galsim.config.GetInputObj( + 'telescope', + config['input']['telescope'], + config, + 'telescope' + ).fiducial + galsim.config.SetupInputsForImage(config) + det_telescope = config['det_telescope'] + + assert isinstance(det_telescope['Detector'].surface, batoid.Sum) + assert isinstance(det_telescope['Detector'].surface.surfaces[1], batoid.Zernike) + + # Sensor R11_S01 has a noticeable height offset. Check that. + sensor_center_CCS = (-0.16925, -0.127) + np.testing.assert_allclose( + det_telescope['Detector'].surface.sag(*sensor_center_CCS), + 8e-6, # ~ +8 microns + rtol=0, atol=1e-6 + ) + + if __name__ == "__main__": test_config_shift() test_config_rot() test_config_zernike_perturbation() test_config_fea() test_config_fea_file_num() + test_config_focus_z() + test_config_fp_height()