fix snakemake main version to v8
pushed 1 commit to master • 4542ed4…ffa7545 • on Apr 23, 2024
upd medaka version to v1.11.3
pushed 1 commit to master • 4cb5f4d…4542ed4 • on Apr 23, 2024
pushed 1 commit to master • 69fcb11…4cb5f4d • on Apr 5, 2024
pushed 1 commit to master • 7538e96…69fcb11 • on Mar 19, 2024
use Pyhton raw strings for regexes
pushed 1 commit to master • f4d6add…7538e96 • on Mar 18, 2024
run canu as shadow rule to reduce disk space usage
pushed 1 commit to master • c65ee58…f4d6add • on Mar 5, 2024
add new conda env for filtlong
pushed 1 commit to master • 8b731e3…c65ee58 • on Jan 25, 2024
pushed 1 commit to master • bac81b2…8b731e3 • on Jan 25, 2024
add resources/mem_mb and more temp() in rules
pushed 4 commits to master • 8f923f4…bac81b2 • on Jan 24, 2024
add option to specify assemblies via config file
pushed 1 commit to master • b11d31e…8f923f4 • on Jan 19, 2024
allow higher Snakemake version in main env
pushed 1 commit to master • bfcbc9a…b11d31e • on Jan 19, 2024
add option for running score-assemblies
pushed 1 commit to master • 3cebf3f…bfcbc9a • on Jan 19, 2024
pushed 1 commit to master • ca99be5…3cebf3f • on Jan 19, 2024
fix python and numpy version for homopolish
pushed 1 commit to master • a914280…ca99be5 • on Nov 6, 2023
fix linter error with snakefmt
pushed 1 commit to master • 8e03bd1…a914280 • on Jul 7, 2023
add Rasusa for subsampling ONT reads
pushed 1 commit to master • 315bde4…8e03bd1 • on Jul 7, 2023
pushed 1 commit to master • b434c02…315bde4 • on May 12, 2023
upd versions of all programs
pushed 1 commit to master • 8b06823…b434c02 • on Mar 15, 2023
add POLCA short read polishing
pushed 1 commit to master • 514c20f…8b06823 • on Mar 14, 2023
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pmenzel