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Quality control analyses and outputs for the probes used in the final panel.

Rscript src/check.r \
	../panel.csv \
	data/all_target_segments_Methyl_UniversityofBristol_lung-cancer-risk-panel_shift100_1X_MTE-93452736_hg19_LOWStringency.bed \
    data/all_target_segments_covered_by_probes_Methyl_UniversityofBristol_lung-cancer-risk-panel_shift100_1X_MTE-93452736_hg19_LOWStringency.bed \
    data/all_target_segments_not_covered_by_probes_Methyl_UniversityofBristol_lung-cancer-risk-panel_shift100_1X_MTE-93452736_hg19_LOWStringency.bed \
	data/merged_probe_file_shareable_Methyl_UniversityofBristol_lung-cancer-risk-panel_shift100_1X_MTE-93452736_hg19_LOWStringency.bed \
	output/stats.rmd

Output is here: output/stats.md