DESCRIPTION

Package: varistran
Title: Variance Stabilizing Transformations appropriate for RNA-Seq expression
    data
Description: Transform RNA-Seq count data so that variance due to biological
    noise plus its count-based nature is stable across genes with different
    average expression levels. This takes the form of a log transformation which is
    moderated for low counts. Transforming data in this way makes many statistical
    and machine learning techniques applicable. A Shiny report function showing
    diagnostic plots based on the transformed data is also provided.
Authors@R: person("Paul", "Harrison", email = "paul.harrison@monash.edu", role = c("aut", "cre"))
Maintainer: Paul Harrison <paul.harrison@monash.edu>
URL: https://github.com/MonashBioinformaticsPlatform/varistran
Version: 1.0.5
License: LGPL-2.1 | file LICENSE
Depends:
    grid
Imports:
    MASS,
    ggplot2,
    shiny,
    miniUI,
    seriation,
    gridBase
Suggests:
    edgeR,
    limma,
    DESeq2,
    biomaRt,
    NBPSeq
RoxygenNote: 7.3.2
Encoding: UTF-8