diff --git a/.nojekyll b/.nojekyll
index a9af033e..c3edf1a1 100644
--- a/.nojekyll
+++ b/.nojekyll
@@ -1 +1 @@
-87bf0b7c
\ No newline at end of file
+5eedecfc
\ No newline at end of file
diff --git a/home_contents.html b/home_contents.html
index 98a00060..03847fb1 100644
--- a/home_contents.html
+++ b/home_contents.html
@@ -187,32 +187,32 @@ <h1 class="title">Contents</h1>
 <tr class="even">
 <td>Conda</td>
 <td><a href="lectures/conda/conda.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
-<td><a href="pages/conda/conda.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
+<td><a href="pages/conda.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
 </tr>
 <tr class="odd">
 <td>Snakemake</td>
 <td><a href="lectures/snakemake/snakemake.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
-<td><a href="pages/git/snakemake.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
+<td><a href="pages/snakemake.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
 </tr>
 <tr class="even">
 <td>Nextflow</td>
 <td><a href="lectures/nextflow/nextflow.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
-<td><a href="pages/git/nextflow.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
+<td><a href="pages/nextflow.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
 </tr>
 <tr class="odd">
 <td>Quarto</td>
 <td><a href="lectures/quarto/quarto.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
-<td><a href="pages/git/quarto.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
+<td><a href="pages/quarto.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
 </tr>
 <tr class="even">
 <td>Jupyter</td>
 <td><a href="lectures/jupyter/jupyter.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
-<td><a href="pages/git/jupyter.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
+<td><a href="pages/jupyter.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
 </tr>
 <tr class="odd">
 <td>Containers</td>
 <td><a href="lectures/containers/containers.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
-<td><a href="pages/git/containers.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
+<td><a href="pages/containers.html"><i class="fa-solid fa-file-lines" aria-label="file-lines"></i></a></td>
 </tr>
 <tr class="even">
 <td>Putting it all together</td>
diff --git a/index.html b/index.html
index 325d5a4d..3451effb 100644
--- a/index.html
+++ b/index.html
@@ -143,7 +143,7 @@ <h2 class="anchored" data-anchor-id="tools-for-reproducible-research"><span clas
 <p>How to work reproducibly with control and structuring of project code, environment and workflow management</p>
 <hr>
 <div class="small">
-<p>Updated: 15-10-2024 at 16:42:56 .</p>
+<p>Updated: 15-10-2024 at 16:45:34 .</p>
 </div>
 </section>
 </div>
diff --git a/search.json b/search.json
index f46813f1..b216491c 100644
--- a/search.json
+++ b/search.json
@@ -725,14 +725,14 @@
     "href": "index.html",
     "title": "",
     "section": "",
-    "text": "How to work reproducibly with control and structuring of project code, environment and workflow management\n\n\nUpdated: 15-10-2024 at 16:42:56 ."
+    "text": "How to work reproducibly with control and structuring of project code, environment and workflow management\n\n\nUpdated: 15-10-2024 at 16:45:34 ."
   },
   {
     "objectID": "index.html#tools-for-reproducible-research",
     "href": "index.html#tools-for-reproducible-research",
     "title": "",
     "section": "",
-    "text": "How to work reproducibly with control and structuring of project code, environment and workflow management\n\n\nUpdated: 15-10-2024 at 16:42:56 ."
+    "text": "How to work reproducibly with control and structuring of project code, environment and workflow management\n\n\nUpdated: 15-10-2024 at 16:45:34 ."
   },
   {
     "objectID": "home_schedule.html",
diff --git a/sitemap.xml b/sitemap.xml
index 45d27be5..959f9d4b 100644
--- a/sitemap.xml
+++ b/sitemap.xml
@@ -50,7 +50,7 @@
   </url>
   <url>
     <loc>https://nbisweden.github.io/workshop-reproducible-research/home_contents.html</loc>
-    <lastmod>2024-10-15T14:41:31.976Z</lastmod>
+    <lastmod>2024-10-15T14:45:19.217Z</lastmod>
   </url>
   <url>
     <loc>https://nbisweden.github.io/workshop-reproducible-research/home_precourse.html</loc>