From cdf24028a1e7f2ffea2ba52cde66567674675762 Mon Sep 17 00:00:00 2001 From: mw Date: Mon, 17 Jun 2024 00:46:25 +0200 Subject: [PATCH] Update documentation --- _sources/examples/waveguide_3d.ipynb | 19 +++-- examples/waveguide_3d.html | 110 ++++++++++---------------- maxwell/diffops.html | 18 ++--- maxwell/hcurl.html | 6 +- reports/examples/waveguide_3d.err.log | 36 +++++++++ searchindex.js | 2 +- 6 files changed, 102 insertions(+), 89 deletions(-) create mode 100644 reports/examples/waveguide_3d.err.log diff --git a/_sources/examples/waveguide_3d.ipynb b/_sources/examples/waveguide_3d.ipynb index 39a25b9..20594aa 100644 --- a/_sources/examples/waveguide_3d.ipynb +++ b/_sources/examples/waveguide_3d.ipynb @@ -233,9 +233,9 @@ ], "source": [ "#Draw solution\n", - "#scenebd = Draw (gfe[1], mesh, \"E\", order=2, draw_surf=True, clipping={\"y\":1, \"z\":0},min=-0.5,max=0.5,autoscale=False)\n", - "scenee = Draw (gfE[1], mesh, \"E\", order=2, draw_surf=False, clipping={\"y\":1, \"z\":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {\"Objects\" : {\"Clipping Plane\" : True}}, euler_angles=[-120,2,-15])\n", - "#sceneh = Draw (gfH.Operator(\"altshape\")[2], mesh, \"H\", order=2, draw_surf=False, clipping={\"y\":1, \"z\":0},min=-0.5,max=0.5,autoscale=False)\n" + "#scenee = Draw (gfE[1], mesh, \"E\", order=2, draw_surf=False, clipping={\"y\":1, \"z\":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {\"Objects\" : {\"Clipping Plane\" : True}}, euler_angles=[-120,2,-15])\n", + "#sceneh = Draw (gfH.Operator(\"altshape\")[2], mesh, \"H\", order=2, draw_surf=False, clipping={\"y\":1, \"z\":0},min=-0.5,max=0.5,autoscale=False)\n", + "gfE_anim = GridFunction(fesE,multidim=0)" ] }, { @@ -277,6 +277,7 @@ "tmpE = gfE.vec.CreateVector()\n", "\n", "now = time()\n", + "timepassed = 0\n", "with TaskManager():\n", " gfH.vec.data += -tau/2*massH_inv@bf_mixed*gfE.vec\n", " while t - - - @@ -451,7 +448,7 @@

3.3. Dualmesh method for an electromagne
-
BaseWebGuiScene
+
BaseWebGuiScene
@@ -539,14 +536,25 @@

3.3. Dualmesh method for an electromagne 
#Draw solution
-#scenebd = Draw (gfe[1], mesh, "E", order=2, draw_surf=True, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False)
-scenee = Draw (gfE[1], mesh, "E", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {"Objects" : {"Clipping Plane" : True}}, euler_angles=[-120,2,-15])
+#scenee = Draw (gfE[1], mesh, "E", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {"Objects" : {"Clipping Plane" : True}}, euler_angles=[-120,2,-15])
 #sceneh = Draw (gfH.Operator("altshape")[2], mesh, "H", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False)
+gfE_anim = GridFunction(fesE,multidim=0)
-
+
---------------------------------------------------------------------------
+NameError                                 Traceback (most recent call last)
+Input In [7], in <cell line: 4>()
+      1 #Draw solution
+      2 #scenee = Draw (gfE[1], mesh, "E", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {"Objects" : {"Clipping Plane" : True}}, euler_angles=[-120,2,-15])
+      3 #sceneh = Draw (gfH.Operator("altshape")[2], mesh, "H", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False)
+----> 4 gfE_anim = GridFunction(fesE,multidim=0)
+
+NameError: name 'fesE' is not defined
+
+
+

@@ -562,6 +570,7 @@

3.3. Dualmesh method for an electromagne tmpE = gfE.vec.CreateVector() now = time() +timepassed = 0 with TaskManager(): gfH.vec.data += -tau/2*massH_inv@bf_mixed*gfE.vec while t<tend: @@ -574,79 +583,44 @@

3.3. Dualmesh method for an electromagne gfH.vec.data += -tau*massH_inv@bf_mixed*gfE.vec if i%drawevery == 0: - timepassed = time()-now - scenee.Redraw() + timepassed += time()-now + #scenee.Redraw() #sceneh.Redraw() - print("\r time = {}, step = {}, {:e} dofs/s".format(t,i,drawevery*fes.ndof/timepassed),end="") + gfE_anim.AddMultiDimComponent(gfE.vec) + #print("\r time = {}, step = {}, {:e} dofs/s".format(t,i,drawevery*fes.ndof/timepassed),end="") now = time()

-
 time = 0.17777777777777762, step = 100,  3.831430e+07 dofs/s
-
-
-
 time = 0.35555555555555435, step = 200,  3.598219e+07 dofs/s
-
-
-
 time = 0.5333333333333311, step = 300,  3.887032e+07 dofs/s
-
-
-
 time = 0.7111111111111078, step = 400,  4.012115e+07 dofs/s
-
-
-
 time = 0.8888888888888845, step = 500,  3.951472e+07 dofs/s
-
-
-
 time = 1.0666666666666653, step = 600,  4.115749e+07 dofs/s
-
-
-
 time = 1.2444444444444531, step = 700,  4.067154e+07 dofs/s
-
-
-
 time = 1.422222222222241, step = 800,  4.005547e+07 dofs/s
-
-
-
 time = 1.6000000000000287, step = 900,  4.294784e+07 dofs/s
-
-
-
 time = 1.7777777777778165, step = 1000,  4.093375e+07 dofs/s
+
 time = 3.733333333333482, step = 2100,  3.255827e+07 dofs/ss
 

 

-
 time = 1.9555555555556043, step = 1100,  4.110797e+07 dofs/s
-

-

-
 time = 2.133333333333392, step = 1200,  4.211048e+07 dofs/s
-

-

-
 time = 2.3111111111111797, step = 1300,  4.056489e+07 dofs/s
-

-

-
 time = 2.4888888888889675, step = 1400,  4.205722e+07 dofs/s
-

-

-
 time = 2.6666666666667553, step = 1500,  4.146143e+07 dofs/s
-

-

-
 time = 2.844444444444543, step = 1600,  4.149856e+07 dofs/s
-

-

-
 time = 3.022222222222331, step = 1700,  4.331378e+07 dofs/s
-

-

-
 time = 3.2000000000001187, step = 1800,  4.118499e+07 dofs/s
-

-

-
 time = 3.3777777777779066, step = 1900,  4.036926e+07 dofs/s
+
---------------------------------------------------------------------------
+KeyboardInterrupt                         Traceback (most recent call last)
+Input In [8], in <cell line: 13>()
+     18 i+=1
+     19 tmpE.data = tau*bf_mixed.T*gfH.vec+bfm_E*(gfE.vec-rhsEfunc(t))
+---> 20 gfE.vec.data = rhsEfunc(t)
+     21 gfE.vec.data += massE_inv*tmpE
+     23 gfH.vec.data += -tau*massH_inv@bf_mixed*gfE.vec
+
+Input In [6], in <lambda>(t)
+      7 gfe.vec.data = massE_surf_inv*lfr
+      8 #Draw(gfe)
+---> 11 rhsEfunc = lambda t: exp(-c*(t<t0)*(t0-t)**2)*sin(omega*t)*gfe.vec
+     13 #visualize dirichlet data over time
+     14 ts = np.arange(0,5,0.01)
+
+KeyboardInterrupt: 
 

 

-
 time = 3.5555555555556944, step = 2000,  4.357804e+07 dofs/s
-

 

-
 time = 3.733333333333482, step = 2100,  4.093240e+07 dofs/s
-

 

-
 time = 3.91111111111127, step = 2200,  4.196624e+07 dofs/s
+

+

+
print("finshed with an average of {:e} dofs/s".format(i*fes.ndof/timepassed),end="")
+scenee = Draw (gfE_anim[1], mesh, "E", order=2, animate = True, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {"Objects" : {"Clipping Plane" : True}}, euler_angles=[-120,2,-15])
 

 

 

diff --git a/maxwell/diffops.html b/maxwell/diffops.html
index d519516..4a94218 100644
--- a/maxwell/diffops.html
+++ b/maxwell/diffops.html
@@ -60,7 +60,7 @@
     
     
     
-    
+    
     
     
     
@@ -477,13 +477,11 @@ 
 Contents 

 

 

 
#### assembling ####
-full: 0.19479799270629883s
-geometry_free: 0.02530384063720703s
-

-

-
#### application ####
-full: 0.2621617317199707s
-geometry_free: 0.06622910499572754s
+full: 0.14386940002441406s
+geometry_free: 0.01591348648071289s
+#### application ####
+full: 0.15303897857666016s
+geometry_free: 0.02896285057067871s
 

 

 

@@ -537,7 +535,7 @@ 
Étude: computing the gradient of a Gaussian peak
 

 

-

+

 

 
Similar to above we assemble the discrete gradient including the distributional (boundary) terms

 

@@ -573,7 +571,7 @@ 
Étude: computing the gradient of a Gaussian peak
 

 

-

+
diff --git a/maxwell/hcurl.html b/maxwell/hcurl.html index 7dea55e..5eb1ee7 100644 --- a/maxwell/hcurl.html +++ b/maxwell/hcurl.html @@ -60,7 +60,7 @@ - + @@ -491,7 +491,7 @@

The space \(X_P^{\mathrm{grad}}(\

-
+
@@ -541,7 +541,7 @@

The space \(\tilde X_P^{\mathrm{c
-
+

diff --git a/reports/examples/waveguide_3d.err.log b/reports/examples/waveguide_3d.err.log new file mode 100644 index 0000000..48f9e3a --- /dev/null +++ b/reports/examples/waveguide_3d.err.log @@ -0,0 +1,36 @@ +Traceback (most recent call last): + File "/home/mwess/.local/lib/python3.10/site-packages/jupyter_cache/executors/utils.py", line 58, in single_nb_execution + executenb( + File "/usr/local/lib/python3.10/dist-packages/nbclient/client.py", line 1269, in execute + return NotebookClient(nb=nb, resources=resources, km=km, **kwargs).execute() + File "/usr/local/lib/python3.10/dist-packages/nbclient/util.py", line 85, in wrapped + return just_run(coro(*args, **kwargs)) + File "/usr/local/lib/python3.10/dist-packages/nbclient/util.py", line 60, in just_run + return loop.run_until_complete(coro) + File "/usr/lib/python3.10/asyncio/base_events.py", line 649, in run_until_complete + return future.result() + File "/usr/local/lib/python3.10/dist-packages/nbclient/client.py", line 707, in async_execute + await self.async_execute_cell( + File "/usr/local/lib/python3.10/dist-packages/nbclient/client.py", line 1025, in async_execute_cell + await self._check_raise_for_error(cell, cell_index, exec_reply) + File "/usr/local/lib/python3.10/dist-packages/nbclient/client.py", line 919, in _check_raise_for_error + raise CellExecutionError.from_cell_and_msg(cell, exec_reply_content) +nbclient.exceptions.CellExecutionError: An error occurred while executing the following cell: +------------------ +#Draw solution +#scenee = Draw (gfE[1], mesh, "E", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {"Objects" : {"Clipping Plane" : True}}, euler_angles=[-120,2,-15]) +#sceneh = Draw (gfH.Operator("altshape")[2], mesh, "H", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False) +gfE_anim = GridFunction(fesE,multidim=0) +------------------ + +--------------------------------------------------------------------------- +NameError Traceback (most recent call last) +Input In [7], in () + 1 #Draw solution + 2 #scenee = Draw (gfE[1], mesh, "E", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False,points=dcs.GetWebGuiPoints(2),settings = {"Objects" : {"Clipping Plane" : True}}, euler_angles=[-120,2,-15]) + 3 #sceneh = Draw (gfH.Operator("altshape")[2], mesh, "H", order=2, draw_surf=False, clipping={"y":1, "z":0},min=-0.5,max=0.5,autoscale=False) +----> 4 gfE_anim = GridFunction(fesE,multidim=0) + +NameError: name 'fesE' is not defined +NameError: name 'fesE' is not defined + diff --git a/searchindex.js b/searchindex.js index 487be00..d5acd0f 100644 --- a/searchindex.js +++ b/searchindex.js @@ -1 +1 @@ -Search.setIndex({"docnames": ["examples", "examples/qualitative_dispersion", "examples/ring_resonator", "examples/waveguide_3d", "installation", "intro", "maxwell", "maxwell/diffops", "maxwell/hcurl", "maxwell/introduction", "maxwell/mass_lumping", "maxwell/time_stepping"], "filenames": ["examples.md", "examples/qualitative_dispersion.ipynb", "examples/ring_resonator.ipynb", "examples/waveguide_3d.ipynb", "installation.md", "intro.md", "maxwell.md", "maxwell/diffops.md", "maxwell/hcurl.md", "maxwell/introduction.md", "maxwell/mass_lumping.md", "maxwell/time_stepping.md"], "titles": ["3. 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