+
+All Classes
+
+
+-
+
- + +
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+INDENT |
+" " |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final int |
+DEFAULT_SEED |
+123456789 |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+GLOBAL_TIME_SBML |
+"t" |
+
+
+public static final String |
+GLOBAL_TIME_SBML_MATHML |
+"<csymbol encoding=\"text\" definitionURL=\"http://www.sbml.org/sbml/symbols/time\"> time </csymbol>" |
+
+
+public static final String |
+PREF_SEDML_SCHEMA |
+"https://raw.githubusercontent.com/SED-ML/sed-ml/master/schema/level1/version3/sed-ml-L1-V3.xsd" |
+
+
+public static final int |
+SEDML_LEVEL |
+1 |
+
+
+public static final int |
+SEDML_VERSION |
+3 |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+INDENT |
+" " |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+GLOBAL_TIME_CELLML |
+"time" |
+
+
+public static final String |
+LOCAL_CELLML_SCHEMA |
+"???.xsd" |
+
+
+public static final String |
+PREF_CELLML_SCHEMA |
+"http://www.cellml.org/cellml/cellml_1_1.xsd" |
+
+
+public static final String |
+PREF_CELLML_VERSION |
+"http://www.cellml.org/cellml/1.1#" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public final String |
+CELL_DEFINITION_SUFFIX |
+"_celldefinition" |
+
+
+public final String |
+INPUT_DEFINITION_SUFFIX |
+"_inputdefinition" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+NEURON_HOME_ENV_VAR |
+"NEURON_HOME" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public final String |
+CELL_DEFINITION_SUFFIX |
+"_celldefinition" |
+
+
+public final String |
+INPUT_DEFINITION_SUFFIX |
+"_inputdefinition" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+GLOBAL_TIME_SBML |
+"t" |
+
+
+public static final String |
+GLOBAL_TIME_SBML_MATHML |
+"<csymbol encoding=\"text\" definitionURL=\"http://www.sbml.org/sbml/symbols/time\"> time </csymbol>" |
+
+
+public static final String |
+PREF_SBML_SCHEMA |
+"http://sbml.org/Special/xml-schemas/sbml-l2v2-schema/sbml.xsd" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+DUMMY_POPULATION_PREFIX |
+"population_" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+ARCH_64BIT |
+"amd64" |
+
+
+public static final String |
+ARCH_I386 |
+"i386" |
+
+
+public static final String |
+ARCH_I686 |
+"i686" |
+
+
+public static final String |
+ARCH_POWERPC |
+"ppc" |
+
+
+public static final String |
+ARCH_UMAC |
+"umac" |
+
+
+public static final String |
+DIR_64BIT |
+"x86_64" |
+
+
+public static final String |
+DIR_I386 |
+"i386" |
+
+
+public static final String |
+DIR_I686 |
+"i686" |
+
+
+public static final String |
+DIR_POWERPC |
+"powerpc" |
+
+
+public static final String |
+DIR_UMAC |
+"umac" |
+
+
+public static final String |
+LEMS_EXAMPLES_RESOURCES_DIR |
+"/LEMSexamples" |
+
+
+public static final String |
+NEUROML_COMPTYPR_RESOURCES_DIR |
+"/NeuroML2CoreTypes" |
+
+
+public static final String |
+NEUROML_EXAMPLES_RESOURCES_DIR |
+"/examples" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+cTemplateFile |
+"/cvode/cvode.vm" |
+
+
+public static final String |
+dnsimMainFile |
+"/dnsim/dnsim.m.vm" |
+
+
+public static final String |
+dnsimModuleFile |
+"/dnsim/dnsim.txt.vm" |
+
+
+public static final String |
+edenRunTemplateFile |
+"/eden/run.vm" |
+
+
+public static final String |
+makeFile |
+"cvode/Makefile" |
+
+
+public static final String |
+matlabEulerFile |
+"/matlab/matlab_euler.vm" |
+
+
+public static final String |
+matlabOdeFile |
+"/matlab/matlab_ode.vm" |
+
+
+public static final String |
+modelicaClassTemplateFile |
+"/modelica/main_class.vm" |
+
+
+public static final String |
+modelicaRunTemplateFile |
+"/modelica/run.vm" |
+
+
+public static final String |
+mooseRunTemplateFile |
+"/moose/run.vm" |
+
+
+public static final String |
+nestCellTemplateFile |
+"/nest/cell.vm" |
+
+
+public static final String |
+nestRunTemplateFile |
+"/nest/run.vm" |
+
+
+public static final String |
+netpyneCellTemplateFile |
+"/netpyne/cell.vm" |
+
+
+public static final String |
+netpyneInputNeuronTemplateFile |
+"/netpyne/input_neuron.vm" |
+
+
+public static final String |
+netpyneRunTemplateFile |
+"/netpyne/run.vm" |
+
+
+public static final String |
+neuronCellTemplateFile |
+"/neuron/cell.vm" |
+
+
+public static final String |
+pynnAbstractCellTemplateFile |
+"/pynn/abstract_cell.vm" |
+
+
+public static final String |
+pynnInputNeuronTemplateFile |
+"/pynn/input_neuron.vm" |
+
+
+public static final String |
+pynnMorphCellTemplateFile |
+"/pynn/morph_cell.vm" |
+
+
+public static final String |
+pynnRunTemplateFile |
+"/pynn/run.vm" |
+
+
+public static final String |
+vertexCellTemplateFile |
+"/vertex/cell.vm" |
+
+
+public static final String |
+vertexRunTemplateFile |
+"/vertex/run.vm" |
+
+
+public static final String |
+vertexSynapseTemplateFile |
+"/vertex/synapse.vm" |
+
+
+public static final String |
+xppTemplateFile |
+"/xpp/xpp.vm" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+SUPPORTED |
+"Supported" |
+
| Modifier and Type | +Constant Field | +Value | +
|---|---|---|
+
+public static final String |
+NAMESPACE_9ML |
+"http://nineml.incf.org/9ML/0.3" |
+
+
+public static final String |
+NAMESPACE_SPINEML_COMP_LAYER |
+"http://www.shef.ac.uk/SpineMLComponentLayer" |
+
+
+public static final String |
+NAMESPACE_SPINEML_EXP_LAYER |
+"http://www.shef.ac.uk/SpineMLExperimentLayer" |
+
+
+public static final String |
+NAMESPACE_SPINEML_NET_LAYER |
+"http://www.shef.ac.uk/SpineMLNetworkLayer" |
+
+
+public static final String |
+SCHEMA_9ML |
+"https://raw.github.com/OpenSourceBrain/NineMLShowcase/master/Schemas/NineML/NineML_v0.3.xsd" |
+
+
+public static final String |
+SCHEMA_SPINEML_COMP_LAYER |
+"http://bimpa.group.shef.ac.uk/SpineML/schemas/SpineMLComponentLayer.xsd" |
+
+
+public static final String |
+SCHEMA_SPINEML_EXP_LAYER |
+"http://bimpa.group.shef.ac.uk/SpineML/schemas/SpineMLExperimentLayer.xsd" |
+
+
+public static final String |
+SCHEMA_SPINEML_NET_LAYER |
+"http://bimpa.group.shef.ac.uk/SpineML/schemas/SpineMLNetworkLayer.xsd" |
+
The Overview page is the front page of this API document and provides a list of all packages with a summary for each. This page can also contain an overall description of the set of packages.
+Each package has a page that contains a list of its classes and interfaces, with a summary for each. These pages may contain six categories:
+Each class, interface, nested class and nested interface has its own separate page. Each of these pages has three sections consisting of a class/interface description, summary tables, and detailed member descriptions:
+Each summary entry contains the first sentence from the detailed description for that item. The summary entries are alphabetical, while the detailed descriptions are in the order they appear in the source code. This preserves the logical groupings established by the programmer.
+Each annotation type has its own separate page with the following sections:
+Each enum has its own separate page with the following sections:
+Each documented package, class and interface has its own Use page. This page describes what packages, classes, methods, constructors and fields use any part of the given class or package. Given a class or interface A, its "Use" page includes subclasses of A, fields declared as A, methods that return A, and methods and constructors with parameters of type A. You can access this page by first going to the package, class or interface, then clicking on the "Use" link in the navigation bar.
+There is a Class Hierarchy page for all packages, plus a hierarchy for each package. Each hierarchy page contains a list of classes and a list of interfaces. Classes are organized by inheritance structure starting with java.lang.Object. Interfaces do not inherit from java.lang.Object.
The Deprecated API page lists all of the API that have been deprecated. A deprecated API is not recommended for use, generally due to improvements, and a replacement API is usually given. Deprecated APIs may be removed in future implementations.
+The Index contains an alphabetic index of all classes, interfaces, constructors, methods, and fields, as well as lists of all packages and all classes.
+The All Classes link shows all classes and interfaces except non-static nested types.
+Each serializable or externalizable class has a description of its serialization fields and methods. This information is of interest to re-implementors, not to developers using the API. While there is no link in the navigation bar, you can get to this information by going to any serialized class and clicking "Serialized Form" in the "See also" section of the class description.
+The Constant Field Values page lists the static final fields and their values.
+You can search for definitions of modules, packages, types, fields, methods and other terms defined in the API, using some or all of the name. "Camel-case" abbreviations are supported: for example, "InpStr" will find "InputStream" and "InputStreamReader".
+){kind=link}
){kind=link}
){kind=link}
RectanglePacker.Rectangle where an item is storedRectanglePacker.Rectangles in the tree, for debugging
+ purposesRectanglePacker