From 639585fa8862687de7e0faf3003d3a7074798cc0 Mon Sep 17 00:00:00 2001 From: Nico Matentzoglu Date: Tue, 23 Jul 2024 17:26:17 +0300 Subject: [PATCH] Add a reference page for LLM resources to OBOOK (#510) * Add a reference page for LLM resources to OBOOK This is not meant to be the final word, just a first stab at a reference page. * Typo * Typo; links --------- Co-authored-by: Harry Caufield --- docs/reference/llms.md | 22 ++++++++++++++++++++++ mkdocs.yml | 1 + 2 files changed, 23 insertions(+) create mode 100644 docs/reference/llms.md diff --git a/docs/reference/llms.md b/docs/reference/llms.md new file mode 100644 index 00000000..094bc2d3 --- /dev/null +++ b/docs/reference/llms.md @@ -0,0 +1,22 @@ +## Large Language Models for the Semantic Engineer + +This page contains a collection of resources useful to review for Semantic Engineers (Ontology, KG and Semantic Software Engineers). + +Please suggest your own content here by making a PR! + +### Resources + +#### Introductory + +- OBO Academy training: [Leveraging ChatGPT for ontology curation](../lesson/chatgpt-ontology-curation.md) +- Video trainings + - OBO Academy: [Enhancing curation workflows with CurateGPT](https://www.youtube.com/watch?v=p6j3WwzIv40) + - OBO Academy: [AI-assisted ontology editing workflows, Part 1](https://www.youtube.com/watch?v=wGoGr2dmxZI&ab_channel=obo-academy) + - OBO Academy: [AI-assisted ontology editing workflows Part 2: Validation](https://www.youtube.com/watch?v=cQWfJ5IjUM8&ab_channel=obo-academy) + - OBO Academy: [Applying the Strengths of Large Language Models to Biomedical Informatics](https://www.youtube.com/watch?v=wJvKMIyOpfo&ab_channel=obo-academy) +- [Berkelely Guide to LLMs](https://docs.google.com/document/d/1B6YVEGjzOC7sizhRaKQ0B_afivFAG-Cs1E9yodHaNoA/edit): Evolving Google docs with links to many useful slide decks and presentations. Particularly useful for Curators and Semantic Software Engineers who wish to levarage Monarch LLM tools like [DragonAI](https://github.com/monarch-initiative/dragon-ai-cookiecutter), [CurateGPT](https://github.com/monarch-initiative/curate-gpt) and [OntoGPT](https://github.com/monarch-initiative/ontogpt). + +#### Experienced + +- [Applied LLM](https://applied-llms.org/): A practical guide to building successful LLM products, covering the tactical, operational, and strategic. Very useful resource, please check out if you have not already done so! +- [LLMs with OAK](https://incatools.github.io/ontology-access-kit/howtos/use-llms) diff --git a/mkdocs.yml b/mkdocs.yml index 7aead1eb..7a62309f 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -203,6 +203,7 @@ nav: - Frequently used ODK commands: reference/frequently-used-odk-commands.md - Protege Interface: reference/protege-interface.md - Protege FAQ: reference/protege-faq.md + - LLMs for the Semantic Engineer: reference/llms.md - Formatting your ontology annotations correctly: reference/formatting-license.md - OBO-style term annotation: reference/go-style-annotation-property-practice.md - Ontology Matching: