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KAM Navigator is a Cytoscape plugin that allows licensed BEL Framework users to query, visualize, and manipulate BEL Framework Knowledge Assembly Models (KAMs) using Cytoscape. The Plugin uses the BEL Framework Web Services application to access KAMs and create native Cytoscape networks that can be analyzed and manipulated using the rich set of network-centric Cytoscape tools. The KAM Navigator plugin was developed with two main goals:
- To illustrate how the BEL Framework can easily interoperate with existing technologies, especially those which have a large community around them, and
- To illustrate how to use the BEL Framework Web Services API to create innovative and interesting knowledge-aware applications.
The KAM Navigator plugin was designed and developed by Selventa and is being released to the public. As part of this project, the source code for the KAM Navigator plugin is being made available.
KAM Navigator is compatible with Cytoscape version 2.8 and the BEL Framework 1.3.0 or later.
Before using the KAM Navigator plugin, you must have the BEL Framework Web Services application running and at least one KAM available in the Web Services KAM Store. See the BEL Framework User Guides for more information on compiling KAMs and starting the BEL Framework Web Services application.
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Refer to the full Changelog for the changes in all releases.