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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="description" content="Rhoana website" />
<meta name="keywords" content="Rhoana,Visualization,Mojo,Dense Automatic Neural Annotation" />
<link rel="stylesheet" type="text/css" href="./basic-reader.css" title="Basic Reader CSS template" media="screen,projection" />
<title>RhoANA</title>
</head>
<body>
<div id="headwrap">
<div id="headerleft">
<h1><a href="index.html">RhoANA</a></h1>
<p class="slogan">Dense Automatic Neural Annotation</p>
</div>
<div id="headerright">
<img width="200" src="SEASLogo_small.png" alt="Harvard School of Engineering and Applied Sciences" />
</div>
</div>
<div class="clear"></div>
<div id="banner">
<img width="960" src="mojo_stained_glass_letterbox.jpg" alt="Automatic Neuron Segmentation Stained Glass Image">
</div>
<div id="bodywrap">
<div id="sidebar">
<h2>Links:</h2>
<ul>
<li><a href="http://github.com/Rhoana">Source code</a></li>
<li><a href="http://gvi.seas.harvard.edu/pfister">Pfister group</a></li>
<li><a href="http://www.hms.harvard.edu/dms/neuroscience/fac/lichtman.php">Lichtman group</a></li>
</ul>
</div>
<div id="content">
<p>
RhoANA is software for dense automatic annotation of neurons
in EM serial sections. It includes a processing pipeline, as
well as <i>Mojo</i>, a proofreading and annotation tool.
</p>
<p>
A <a href="http://arxiv.org/abs/1303.7186">preprint</a> describing our work is available.
</p>
<p>
Our code <a href="http://github.com/Rhoana">is available on github.</a>
</p>
<p>
A beta distribution of <a href="http://people.seas.harvard.edu/~seymourkb/Mojo/">Mojo 2.0: Connectome Annotation Tool</a> is available along with some test data.
</p>
<p>
Information regarding <i>Dojo</i> - a web-based proofreading tool for distributed annotation, is available <a href="dojo/">here</a>.
</p>
<p>
More information about <i>NeuroLines</i>, a system for visualizing and analyzing nanoscale neuronal connectivity based on a subway map metaphor can be found <a href="neurolines/index.html">here</a>.
</p>
<p>
More information about <i>NeuroBlocks</i>, a system for visual tracking of segmentation and proofreading for large Connectomics projects can be found <a href="neuroblocks/index.html">here</a>.
</p>
<p>
Jeff Lichtman <a href="http://youtu.be/F37kuXObIBU">spoke at
TEDxCaltech</a> (January 2013) on our efforts to understand the
fundamental nature of the brain.
</p>
</div>
</div>
</body>
</html>