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MethylBeta | DMP Analysis Package

MethylBeta_readme

Overview

This R package provides tools for analyzing differentially methylated positions (DMPs) using beta regression. It includes functions for regression analysis, filtering significant DMPs, and visualizing results.

Features

  • Beta Regression Analysis: Perform beta regression on methylation data to identify DMPs.
  • Flexible Filtering: Filter DMPs based on log fold change or mean difference.
  • Visualization Tools: Create volcano plots, heatmaps and boxplots to visualize methylation data.

Installation

To install the package, use the following commands in R:

# Install devtools if not already installed
install.packages("devtools")

# Install the package from GitHub
devtools::install_github("SAADAT-Abu/MethylBeta")