From d476d907ab3ee2c778efb35e050d320c5038aa19 Mon Sep 17 00:00:00 2001
From: Milan Malfait <38256462+milanmlft@users.noreply.github.com>
Date: Tue, 19 Nov 2024 12:22:47 +0100
Subject: [PATCH] Update deploy instructions

---
 README.md | 16 +++++++++++++++-
 1 file changed, 15 insertions(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 11692ae..2d54d03 100644
--- a/README.md
+++ b/README.md
@@ -100,4 +100,18 @@ docker compose up -d omopcat
 
 By default, the app will be hosted at `http://localhost:3838`.
 
-See the [deployment docs](./deploy/README.md) for more details.
+### Public version
+
+Copy the `public.env.sample` to `public.env` and fill out the necessary environment variables.
+
+Then run the pre-processing pipeline with
+
+```sh
+docker compose --env-file public.env run preprocess
+```
+
+and deploy the app with
+
+```sh
+docker compose --env-file public.env -p omopcat-public up -d omopcat
+```