diff --git a/README.md b/README.md index 8b9d774..a6c31d8 100644 --- a/README.md +++ b/README.md @@ -59,10 +59,9 @@ Running QuIP with PathDB (https://github.com/SBU-BMI/PathDB): 0) place yourself in quip\_distro folder.
1) copy config/httpd.conf.template to config/httpd.conf
-2) copy config/pathdb\_routes.json to config/routes.json (this will overwrite an existing routes.json file)
-3) configure httpd.conf with your certificates to enable https.
-4) build with, "docker-compose -f quip-pathdb.yml build"
-5) run with, "docker-compose -f quip-pathdb.yml up -d" +2) configure httpd.conf with your certificates to enable https.
+3) build with, "docker-compose -f quip-pathdb.yml build"
+4) run with, "docker-compose -f quip-pathdb.yml up -d" ## Support Feel free to add any support inquiry as a github issue to this repository. Other feedback can be given via [this form](https://docs.google.com/forms/d/e/1FAIpQLScL91LxrpAZjU88GBZP9gmcdgdf8__uNUwhws2lzU6Lr4qNwA/viewform). diff --git a/caMicroscope.yml b/caMicroscope.yml index 57328c6..2ca7dd5 100644 --- a/caMicroscope.yml +++ b/caMicroscope.yml @@ -27,9 +27,9 @@ services: - mongo back: build: - context: "https://github.com/camicroscope/caracal.git#v3.8.4" + context: "https://github.com/camicroscope/caracal.git#v3.9.0" args: - viewer: "v3.8.4" + viewer: "v3.9.0" depends_on: - "mongo" ports: @@ -59,7 +59,7 @@ services: volumes: - ./images/:/images/ loader: - build: "https://github.com/camicroscope/SlideLoader.git#v3.8.4" + build: "https://github.com/camicroscope/SlideLoader.git#v3.9.0" container_name: ca-load restart: always logging: diff --git a/config/routes.json b/config/routes.json index 4e4ace4..2290e15 100644 --- a/config/routes.json +++ b/config/routes.json @@ -149,7 +149,7 @@ ] },{ "route":"/data/Mark/multi", - "method":"get", + "method":"post", "handlers":[ {"function":"markMulti", "args": []} ] diff --git a/quip-pathdb.yml b/quip-pathdb.yml index 8f27a04..6687e79 100644 --- a/quip-pathdb.yml +++ b/quip-pathdb.yml @@ -26,9 +26,9 @@ services: - ./images/:/data/images/ back: build: - context: "https://github.com/camicroscope/caracal.git#v3.8.4" + context: "https://github.com/camicroscope/caracal.git#v3.9.0" args: - viewer: "v3.8.4" + viewer: "v3.9.0" depends_on: - "mongo" ports: @@ -45,9 +45,9 @@ services: DISABLE_SEC: "true" pathdb: build: - context: "https://github.com/SBU-BMI/PathDB.git#1.3.5" + context: "https://github.com/SBU-BMI/PathDB.git#1.4.1" args: - viewer: "v3.8.4" + viewer: "v3.9.0" container_name: quip-pathdb restart: unless-stopped ports: ["443:443","80:80"] @@ -60,7 +60,7 @@ services: command: - /config/pathdb_pre.sh imageloader: - build: "https://github.com/SBU-BMI/ImageLoader.git#2.0.3" + build: "https://github.com/SBU-BMI/ImageLoader.git#2.1.0" container_name: quip-imageloader volumes: - ./data:/data/