What are these temporary IDs? And where can I find the compact ID's

[memartone]

hasTemporaryId ilxtr-NeuronHuang2017-0-ilxtr-hasExpressionPhenotype-NCBIGene-12308-0-ilxtr-hasExpressionPhenotype-NCBIGene-20604-0-ilxtr-hasInstanceInTaxon-NCBITaxon-10090-0-ilxtr-hasNeurotransmitterPhenotype-CHEBI-16865-0-ilxtr-hasSomaLocatedIn-UBERON-0001950

[tgbugs]

Has temporary id is the id generated deterministically from the bag of phenotypes. The compact ids are subjects of all the triples, of course Protege completely fails to make those accessible anywhere in the interface except in the little strip above class annotations in the entities tab (sigh). I can add them as an annotation property if that would help.

[memartone]

For the other ontologies, I can show the compact ID, e.g., UBERON:XXXX, but we are not showing the namespace, just the number. Can that be fixed? I thought we settled on NPOKB.

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On Aug 20, 2020, at 11:34 AM, Tom Gillespie ***@***.***> wrote: Has temporary id is the id generated deterministically from the bag of phenotypes. The compact ids are subjects of all the triples, of course Protege completely fails to make those accessible anywhere in the interface except in the little strip above class annotations in the entities tab (sigh). I can add them as an annotation property if that would help. <https://user-images.githubusercontent.com/4299776/90811150-f9cd0e00-e2d8-11ea-9de6-c0a0e272606a.png> — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#217 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABSGOPPXJ4BTF3BNHH44BRLSBVUDZANCNFSM4QFN3LZA>.

[tgbugs]

I think that is a protege issue. I will add the compact id as an annotation property, they are of the form npokb:123.

[memartone]

perfect. I’ll add to the manuscript.

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On Aug 21, 2020, at 12:30 PM, Tom Gillespie ***@***.***> wrote: I think that is a protege issue. I will add the compact id as an annotation property, they are of the form npokb:123. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#217 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABSGOPOWBCI4IYVTP4EIUNTSB3DO7ANCNFSM4QFN3LZA>.