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readMerscope() unable to read in Vizgen cell_boundaries.parquet #9

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rosanababu opened this issue Dec 20, 2023 · 0 comments
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@rosanababu
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Hi

Thanks for MolecularExperiment. I got following error while running readMerscope(). The function is unable to detect cell_boundaries.parquet file. Is there any way to read in the cell_boundaries in parquet file format? Thank you in advance

Error in readMerscope():
! Didn't find any cell_boundaries directories!
ℹ Ensure all HDF5 files are in the cell_boundaries subdir for each sample.
Run rlang::last_trace() to see where the error occurred.

Regards

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