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run_pathway_prop Requires Condition Column #10

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DarioS opened this issue Sep 15, 2023 · 0 comments
Open

run_pathway_prop Requires Condition Column #10

DarioS opened this issue Sep 15, 2023 · 0 comments

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@DarioS
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DarioS commented Sep 15, 2023

But, it does not seem to require it from the data format specification.

data: A Seurat object containing celltype and sample label.

helper_pathway_prop has geneset_prop$condition <- data$condition[match(geneset_prop$sample, data$sample)] which can lead to Error : Cannot find 'condition' in this Seurat object if the condition is not present.

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