Table of Contents generated with DocToc
The following table summarizes the different features types and their equivalent in GENtle/SYBIL.
| GENtle/SYBIL | Genebank |
|---|---|
| cds | CDS |
| gap | assembly_gap |
| attenuator | |
| C_region (parent: CDS) | |
| CAAT_signal | |
| centromere | |
| D-loop | |
| cds | D_segment (parent: CDS) |
| enhancer | enhancer |
| exon | exon |
| gap | |
| GC_signal | |
| gene | gene |
| iDNA | |
| intron | intron |
| cds | J_segment (parent: CDS) |
| LTR | |
| peptide | mat_peptide |
| misc_binding | |
| misc_difference | |
| misc_feature | |
| misc_recomb | |
| misc_RNA | |
| misc_signal | |
| misc_structure | |
| mobile_element | |
| modified_base | |
| mRNA | |
| ncRNA | |
| cds | N_region (parent: CDS) |
| old_sequence | |
| operon | |
| oriT | |
| polyA_signal | |
| polyA_site | |
| precursor_RNA | |
| prim_transcript | |
| primer_bind | |
| promoter | promoter |
| protein_bind | protein_bind |
| rbs | RBS |
| repeat_region | |
| ori | rep_origin |
| rRNA | rRNA |
| cds | S_region (parent: CDS) |
| peptide | sig_peptide |
| source | |
| stem_loop | |
| STS | |
| TATA_signal | |
| telomere | |
| terminator | terminator |
| tmRNA | tmRNA |
| peptide | transit_peptide |
| tRNA | tRNA |
| unsure | |
| cds | V_region (parent: CDS) |
| cds | V_segment (parent: CDS) |
| variation | |
| 3'UTR | |
| 5'UTR | |
| -10_signal | |
| -35_signal | |
| note | |
| misc | |
| alu_element | |
| cre | |
| crispr | |
| mre | |
| pseudogene | |
| tre | |
| binding_domain | |
| protein_domain | |
| protein_tag | |
| lncRNA | |
| miRNA | |
| piRNA | |
| rasiRNA | |
| ribozymes |
Notes:
- Genebank source