diff --git a/.github/ISSUE_TEMPLATE/bug_report.md b/.github/ISSUE_TEMPLATE/bug_report.md new file mode 100644 index 0000000..4c20735 --- /dev/null +++ b/.github/ISSUE_TEMPLATE/bug_report.md @@ -0,0 +1,39 @@ +--- +name: Bug report +about: Create a report to help us improve +title: "[BUG] " +labels: bug +assignees: '' + +--- + +**Before Filing a Report** + +- Did I read the Documentation and/or docstrings? +- Did I search the `NoteMate.jl` GitHub to see if this bug has already been reported? +- Do I have the latest version of `NoteMate.jl` installed? + +**Describe the bug** + +A clear and concise description of what the bug is. + +**To Reproduce** + +1. Julia Version (i.e. output of `julia -v`): + +2. Operating system (Mac, Linux, Windows): + +3. `NoteMate.jl` version (i.e output of `] status NoteMate` in the REPL) + +4. Small code snippet that led to bug: + +**Expected Behavior and Actual Behavior** + +A clear and concise description of what you expected to happen followed up with an explanation of what actually happened. + +**Stacktrace (If Applicable)** + +**Screenshots (If Applicable)** + +**Additional context** +Add any other context about the problem here. diff --git a/.github/ISSUE_TEMPLATE/feature_request.md b/.github/ISSUE_TEMPLATE/feature_request.md new file mode 100644 index 0000000..3f7159c --- /dev/null +++ b/.github/ISSUE_TEMPLATE/feature_request.md @@ -0,0 +1,20 @@ +--- +name: Feature request +about: Suggest an idea for this project +title: '' +labels: enhancement +assignees: '' + +--- + +**Is your feature request related to a problem? Please explain.** +A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] + +**Describe the solution you'd like** +A clear and concise description of what you would like to do and how you would like to do it. Maybe a minimal example of the user interface you imagine for this feature. + +**Describe alternatives you've considered** +A clear and concise description of any alternative solutions or features you've considered. + +**Additional context** +Add any other context or screenshots about the feature request here. diff --git a/CHANGELOG.md b/CHANGELOG.md new file mode 100644 index 0000000..1f9c4a5 --- /dev/null +++ b/CHANGELOG.md @@ -0,0 +1,16 @@ +# NoteMate.jl - Changelog + +## v0.1.0 + +Initial implmentation of package: + +- Added initial documentation + +- Tutorial added + +- API documented for exports + +- Package philosophy added + +- Test suite added + diff --git a/Project.toml b/Project.toml index ed92377..e1419b0 100644 --- a/Project.toml +++ b/Project.toml @@ -1,11 +1,9 @@ name = "NoteMate" uuid = "4bd444d9-eedc-4582-9e81-098846183c20" authors = ["Jacob Zelko "] -version = "0.0.0" +version = "0.0.1" [deps] -CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" Dates = "ade2ca70-3891-5945-98fb-dc099432e06a" Markdown = "d6f4376e-aef5-505a-96c1-9c027394607a" pandoc_jll = "c5432543-76ad-5c9d-82bf-db097047a5e2" diff --git a/README.md b/README.md new file mode 100644 index 0000000..194a66e --- /dev/null +++ b/README.md @@ -0,0 +1,55 @@ +# Welcome to `NoteMate.jl`! 📝 + +[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://jacobzelko.com/NoteMate/dev/) +[![Test Coverage](https://codecov.io/gh/TheCedarPrince/NoteMate/branch/main/graph/badge.svg)](https://app.codecov.io/gh/TheCedarPrince/NoteMate) +[![Build Status](https://github.com/TheCedarPrince/NoteMate/workflows/CI/badge.svg)](https://github.com/TheCedarPrince/NoteMate/actions) +[![Code Style: Blue](https://img.shields.io/badge/code%20style-blue-4495d1.svg)](https://github.com/invenia/BlueStyle) + + + +> The perfect companion for working with your notes 📚 + +`NoteMate.jl` is a programmatic transformation tool used to parse and manipulate notes whose structure follows the [Open Knowledge Model (OKM)](https://jacobzelko.com/04172022033744-open-knowledge-standard/index.html). +The goal of `NoteMate.jl` is to enable one to focus only on writing without worry of needing to add any special markup to your note *while* having the benefits of quickly sharing thoughts. +In fact, sharing your thoughts, whether locally or on the internet, is never far away as `NoteMate.jl` provides tools to enable your thoughts to be published on [digital gardens](https://www.lekoarts.de/garden/what-is-a-digital-garden). +Finally, due to the way `NoteMate.jl` parses documents, `NoteMate.jl` can transform notes following the OKM and express them in different outputs irrespective of the implementation. + +# Installation + +To install `NoteMate.jl` currently, one needs to run the following command in their Julia REPL: + +``` +pkg> add NoteMate +``` + +# Current Capabilities + +Currently, these are some of the high level capabilities `NoteMate.jl` can perform: + +- Ingest supported filetypes following OKM layout: + + - Markdown + +- Parsing of a OKM "Note" object to different support outputs: + + - [`Franklin.jl`](https://franklinjl.org) Markdown + +- Static site deployment workflows supported for rapid [digital garden](https://www.lekoarts.de/garden/what-is-a-digital-garden) creation: + + - [`Franklin.jl`](https://franklinjl.org) Support + +- Custom citation rendering and creation via `pandoc`, `bibtex`, and `CSL` + +# Websites Using `NoteMate.jl` + +Here are some websites that use `NoteMate.jl` to manage their website + +- [TheCedarPrince's Personal Website](https://jacobzelko.com) - a [Franklin.jl](https://franklinjl.org)-based website that hosts a blog, note archive, and their research endeavors. + +# Contributors + +`NoteMate.jl` would not be possible if not for the help and support from our contributors here: + +| | | | | +| :---: | :---: | :---: | :---: | +|
[SevorisDoe](https://github.com/SevorisDoe) | | | | diff --git a/docs/Project.toml b/docs/Project.toml index 95422b7..15f0642 100644 --- a/docs/Project.toml +++ b/docs/Project.toml @@ -1,4 +1,6 @@ [deps] Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4" DocumenterTools = "35a29f4d-8980-5a13-9543-d66fff28ecb8" +LiveServer = "16fef848-5104-11e9-1b77-fb7a48bbb589" +Markdown = "d6f4376e-aef5-505a-96c1-9c027394607a" NoteMate = "4bd444d9-eedc-4582-9e81-098846183c20" diff --git a/docs/make.jl b/docs/make.jl index 46deac2..35ec1fc 100644 --- a/docs/make.jl +++ b/docs/make.jl @@ -14,6 +14,10 @@ makedocs(; ), pages = [ "Home" => "index.md", + "API Reference" => "api.md", + "Tutorials" => [ + "Markdown Tutorial" => "mkd_franklin_tutorial.md" + ] ], ) diff --git a/docs/src/api.md b/docs/src/api.md new file mode 100644 index 0000000..749d7bc --- /dev/null +++ b/docs/src/api.md @@ -0,0 +1,68 @@ +# API + +This is a list of documentation associated with every single **exported** function or object from `NoteMate.jl`. +There are a few different sections with a brief explanation of what these sections are followed by relevant functions. + +```@contents +Pages = ["api.md"] +``` + +## Structs + +These are the core objects used to represent various note species within `NoteMate.jl`. +They are designed to be extended or parsed as needed: + +```@docs +FranklinNote +Note +``` + +## Parsing + +These functions are built to parse different sorts of files into `NoteMate.jl` objects (i.e. [structs](#structs)). +Multiple sections exist to denote what markup languages are able to be parsed as of now: + +### Markdown + +The parsing for `NoteMate.jl` supports Markdown -- specifically, [CommonMark Markdown](https://commonmark.org/help/) is supported but support for other variants could be added in the future: + +```@docs +find_citation_groups +create_inline_citations +create_references +find_markdown_links +create_relative_links +get_headers +get_sections +get_title_section +``` + +## Targeting + +After [parsing](#parsing) a note into a `NoteMate.jl` object, these functions support translating each object into a specified target output. +These targets are designed to quickly translate one's note to a publishable artifact for the internet (or other future supported platforms). +The following sections denote functions that support a given target: + +### Franklin + +[`Franklin.jl`](https://franklinjl.org) is a static site generator written in the Julia programming language. +It uses its own variant of markdown called "Franklin Markdown" to assist in publishing content to the web: + +```@docs +create_franklin_note +generate_franklin_template +generate_note_summary +generate_bibliography +generate_citation +generate_references +generate_comments +generate_table_of_contents +``` + +## Miscellaneous + +These functions are mostly for occasional use or do not fit cleanly into anyone section yet. + +```@docs +sync_file +``` diff --git a/docs/src/index.md b/docs/src/index.md index 79cfe90..977aa87 100644 --- a/docs/src/index.md +++ b/docs/src/index.md @@ -1,3 +1,55 @@ # Welcome to the `NoteMate.jl` Docs! 👋 -> The perfect companion for working with your notes +> The perfect companion for working with your notes 📚 + +`NoteMate.jl` is a programmatic transformation tool used to parse and manipulate notes whose structure follows the [Open Knowledge Model (OKM)](https://jacobzelko.com/04172022033744-open-knowledge-standard/index.html). +The goal of `NoteMate.jl` is to enable one to focus only on writing without worry of needing to add any special markup to your note *while* having the benefits of quickly sharing thoughts. +In fact, sharing your thoughts, whether locally or on the internet, is never far away as `NoteMate.jl` provides tools to enable your thoughts to be published on [digital gardens](https://www.lekoarts.de/garden/what-is-a-digital-garden). +Finally, due to the way `NoteMate.jl` parses documents, `NoteMate.jl` can transform notes following the OKM and express them in different outputs irrespective of the implementation. + +# Current Capabilities + +Currently, these are some of the high level capabilities `NoteMate.jl` can perform: + +- Ingest supported filetypes following OKM layout: + + - Markdown + +- Parsing of a OKM "Note" object to different support outputs: + + - [`Franklin.jl`](https://franklinjl.org) Markdown + +- Static site deployment workflows supported for rapid [digital garden](https://www.lekoarts.de/garden/what-is-a-digital-garden) creation: + + - [`Franklin.jl`](https://franklinjl.org) Support + +- Custom citation rendering and creation via `pandoc`, `bibtex`, and `CSL` + +# Websites Using `NoteMate.jl` + +Here are some websites that use `NoteMate.jl` to manage their website + +- [TheCedarPrince's Personal Website](https://jacobzelko.com) - a [Franklin.jl](https://franklinjl.org)-based website that hosts a blog, note archive, and their research endeavors. + +# Installation + +To install `NoteMate.jl` currently, one needs to run the following command in their Julia REPL: + +``` +pkg> add https://github.com/TheCedarPrince/NoteMate +``` + + + +# Long Term Vision for NoteMate.jl + +`NoteMate.jl` helps with constructing [digital gardens](https://www.lekoarts.de/garden/what-is-a-digital-garden) for sharing of ideas, insights and information syntheses quickly. +This makes it a good choice for building digital gardens that can be grown with a high-quality, low-tech evidence chain. +Since `NoteMate.jl` follows a modular standard, we think it can be expanded to allow ingestion and translation between many different file formats with different inner-file structures in a bidirectional manner. +As an example, pages in a digital garden may even be able to coalesce multiple notes using the ontology of a note system into aggregate notes in the future. + +Since `NoteMate.jl` enforces a common document format with certain information always present, sufficient standardization is present to consider having digital gardens interlink on the web. +Different webpages might reference one another in such ways that they can build off each other, letting people seamlessly jump between different people's ideas and then incorporate them into their own. +Using the approaches here within `NoteMate.jl`, users may eventually be able to also quickly analyze and understand their own knowledge base data that they can leverage to build on other connections across other knowledge bases or in the context of their own work and research. + + diff --git a/docs/src/mkd_franklin_tutorial.md b/docs/src/mkd_franklin_tutorial.md new file mode 100644 index 0000000..3acef6c --- /dev/null +++ b/docs/src/mkd_franklin_tutorial.md @@ -0,0 +1,270 @@ +# Transforming Markdown Notes To a Given Target ⚗️ + +This workflow explains how one could parse a Markdown note to a NoteMate target and utilize the full suite of tools within NoteMate. +In this tutorial, we will take a Markdown note to a Franklin.jl target output note. +It is an implementation suggestion that one does not have to follow strictly but serves as a starting point in developing one's own workflow. + +## Requirements 🚨 + +To follow this tutorial, create a separate project directory -- I will refer to it as `projdir` going forward -- on your computer, activate Julia, and add the following packages to your project: + +``` +pkg> add Dates +pkg> add Markdown +pkg> add NoteMate +``` + +Now, we need to copy four files into `projdir` from the [Appendix](#Appendix): + +- [Sample Note](#Sample-Note) - copy the content in this file and put it into a file called `note.md` within `projdir`. + +- [IEEE CSL](#IEEE-CSL) - copy the content in this file and put it into a file called `ieee.csl` within `projdir`. + +- [BibTeX References](#BibTeX-References) - copy the content in this file and put it into a file called `refs.bib` within `projdir`. + +- [Processing Script](#Full-Script) - copy the content in this file and put it into a file called `script.jl` within `projdir`. + +Once you have copied these files into the `projdir`, we are ready to go! +The following steps will guide you through different pieces of `script.jl` and how NoteMate works in supporting note processing workflows. +At any point, you can run the full script within `projdir` to test it out. + +## Pre-Processing of a Markdown Note 🚧 + +To process this note into a NoteMate understandable object, NoteMate provides a series of tools to make some of the rudimentary parsing easier. +To get started, we will read this file as a `String`: + +```julia +note = read("note.md", String) +``` + +The reason why we read this as a `String` is so that we can do pattern matching to apply various transformations to the raw representation of the note. + +### Generating Citations 📚 + +Let's first extract and replace the citation keys present within this note with their correct inline citations: + +```julia +# See Steps 1 & 2 +citation_keys = find_citation_groups(note) + +# See Steps 3 & 4 +inline_citations_dict = create_inline_citations(citation_keys, "refs.bib", "ieee.csl") + +# See Step 5 +note = replace(note, inline_citations_dict...) +``` + +Here is what this code block does: + +1. Find all the citation groups within the `String` using [`find_citation_groups()`](@ref). +This returns a vector with all the unique citation groups found within the `String`. +2. Store this result in the `citation_keys` variable. +3. Define the actual inline reference representation for the found citation keys using [`create_inline_citations()`](@ref). +This function utilizes `refs.bib` to map the citation keys found in the `String` to the correct reference information. +Once each key's reference information was found, the `ieee.csl` file defines how the inline citation should appear within the final note. +4. Store this mapping within `inline_citations_dict` +5. Now, we replace all respective citation groups with their appropriate inline citation. + +> **NOTE: What Will Inline Citations Look Like?** As we are using the IEEE CSL format, citation groups that look like this: `[@chase1973mind, @simon1973american]` will be rendered to look something like this in the document `[3, 4]`. + +### Updating Link Paths 🏔️ + +Next, let's scan the document for any links and see which one are relative links. + +> **NOTE: What Is a Relative Link?** These are links that are made within a document that references another note or object within the same directory as the initial document. +> We want to preserve these relationships as they are transformed so as to not lose this information in an eventual deployment. + +To do this, we will use the following code snippet: + +```julia +# See Steps 1 & 2 +markdown_links = find_markdown_links(note, group_links = true) + +# See Steps 3 & 4 +relative_links_dict = create_relative_links(markdown_links["relative_links"]) + +# See Steps 5 +note = replace(note, relative_links_dict...) +``` + +To accomplish this, we will use the following process: + +1. Find all markdown links in a `String` using [`find_markdown_links()`](@ref). +By setting the keyword argument, `group_links = true`, a dictionary of vectors is returned that defines web links (links that link to somewhere on the internet), anchor links (links that jumps to a specific place in a document) or relative links. + +2. Store links within `markdown_links`. + +3. Using `markdown_links`, we can use the [`create_relative_links()`](@ref), to update or finalize relative links that were found before deployment to a target output. + +4. Store this mapping within `relative_links_dict`. + +5. Finally, we replace all relative links with their newly updated path. + +## Processing an OKM Note by Each Component 🛠️ + +With pre-processing complete, we can now start ingesting the specifics of the note into OKM components. +In particular, we will ingest the following components: + +- **Title Block** - this is a unique block that begins with the name of the note followed by three required subcomponents: + + - **Date** - the date the note was created + + - **Summary** - a brief, single sentence summary of what this note is about + + - **Keywords** - keywords that can be used to find or associated with the content of this note + +- **Bibliography Block** - this contains the bibliographic information that is associated with the specific note + +- **Notes** - where one's notes go on the note subject in whatever format one so chooses + +- **References** - list of references used in the note + +To start, we use `Markdown.parse()` to generate a parsed representation of the `note` to turn it into a Julia-understandable Markdown representation: + +```julia +parsed_note = Markdown.parse(note) +``` + +From there, the `note` can be parsed readily as a Julia Markdown object. +NoteMate offers some utility functions to help with this parsing as shown below: + +```julia +note_headers = get_headers(parsed_note.content) +title_header = filter(x -> typeof(x) <: Header{1}, note_headers) +section_headers = filter(x -> typeof(x) <: Header{2}, note_headers) + +sections = get_sections(parsed_note.content, section_headers; name_sections=true) +title_section = get_title_section(parsed_note.content, title_header; name_sections=true) +references_section = create_references(citation_keys, bibtex_path, csl_path) +note_sections = merge!(sections, title_section) +note_sections["References"] = (note_sections["References"][1] |> plain) * "\n" * references_section |> parse |> x -> x.content + +title_section = note_sections["Title"] +bibliography_section = note_sections["Bibliography"][2] |> plain +notes_section = note_sections["Notes"][2:end] |> plain +references_section = note_sections["References"] |> plain + +title = title_section[1].text[1] |> x -> replace(x, "\"" => "'") +date = title_section[2].content[2] |> strip +summary = title_section[3].content[2] |> strip |> x -> replace(x, "\"" => "'") +keywords = title_section[4].content[2] |> strip +``` + +In lieu of explaining all particulars here, here is the general process in how this code block works: + +- [`get_headers()`](@ref) finds all the Markdown headers in the `parsed_note` structure. + +- [`get_sections()`](@ref) will further parse available headers and cut the document apart with all text between each heading isolated as one section. + +- [`get_title_section()`](@ref), gets the single section under the first `Header{1}` and allows it to be parsed into multiple OKM components. + +- [`create_references()`](@ref) uses the function to generate full references for a note's reference component using the `citation_keys` variable generated earlier. + +- A combination of various filters are then used to do additional component splitting and parsing to ingest all needed information into the required OKM components. + +Then, we can create a NoteMate [`Note`](@ref) object: + +```julia +note = Note(title, date, summary, keywords, bibliography_section, references_section, notes_section, basename("notes.md"), "notes.md", "ieee.csl", "refs.bib") +``` + +> **NOTE: Note parsing seems too fragile?** If you noticed that parsing this note into each component seemed brittle or too fragile, this is both a strength and a weakness of the OKM. +> The OKM is flexible enough to allow one to implement the OKM however way they want which gives a lot of flexibility to usage. +> However, it comes at the cost that any implementation will need to be parsed according to the way it was implemented into a NoteMate [`Note](@ref)`. + +## Targeting Franklin.jl as an Output Target 🎯 + +With the note parsed into an OKM [`Note`](@ref) object, we can now use NoteMate tools to create a Franklin.jl compliant output. +We use [`create_franklin_note()`](@ref) to created a [`FranklinNote`](@ref) object that is used by NoteMate and [`generate_franklin_template()`](@ref) to generate the initial page set-up with necessary Franklin specific syntax mark-up: + +```julia +franklin_note_raw = create_franklin_note(note) + +franklin_note = "" +franklin_note = franklin_note * generate_franklin_template(title=franklin_note_raw.title, slug=franklin_note_raw.slug, tags=franklin_note_raw.tags, description=franklin_note_raw.description, rss_title=franklin_note_raw.rss_title, rss_description=franklin_note_raw.rss_description, rss_pubdate=franklin_note_raw.rss_pubdate) +``` + +From here, NoteMate provides a variety of tools that accept a `FranklinNote` to generate content for a note written using Franklin markup. +Here is an example of how this is done: + +```julia +# Generate summary section +franklin_note = franklin_note * generate_note_summary(franklin_note_raw) + +# Generate bibliography section +franklin_note = franklin_note * generate_bibliography(franklin_note_raw) + +# Generate a Franklin Table of Contents +franklin_note = franklin_note * generate_table_of_contents() + +# Add note content into the Franklin page +franklin_note = franklin_note * franklin_note_raw.notes + +# Generate a references output section +franklin_note = franklin_note * generate_references(franklin_note_raw) + +# Write the final note to a file +write("franklin_note.md", franklin_note) +``` + +## Congratulations! You Just Converted Your First Note! 🥳 + +Congratulations! +This illustrates a potential workflow using NoteMate to go from OKM-compliant Markdown notes to a Franklin note! +The final Franklin note then could be directly added to a Franklin-based website deployment and rendered on the internet. +This example workflow shows a potential path one could take using NoteMate to ingest an OKM-compliant note and produce an output. +Additional functionality could be added to a workflow to, for example, iterate through one's entire note base, add custom sections to a specific output one would want, or swap citation styles on the fly. +With the scripting ability enabled by NoteMate to iteratively build notes, the possibilities are numerous. + +## Appendix 🔍 + +### Sample Note + +````@eval +using Markdown + +Markdown.parse(""" +```markdown +$(read("./resources/note.txt", String)) +``` +""") +```` + +### IEEE CSL + +````@eval +using Markdown + +Markdown.parse(""" +```text +$(read("./resources/ieee.csl", String)) +``` +""") +```` + +### BibTeX References + +````@eval +using Markdown + +Markdown.parse(""" +```latex +$(read("./resources/refs.bib", String)) +``` +""") +```` + +### Full Script + +Here was the full script that was developed in the course of this tutorial: + +````@eval +using Markdown + +Markdown.parse(""" +```julia +$(read("./resources/mkd_franklin_tutorial_script.jl", String)) +``` +""") +```` + diff --git a/docs/src/parsing.md b/docs/src/parsing.md new file mode 100644 index 0000000..e69de29 diff --git a/docs/src/resources/franklin_note.md b/docs/src/resources/franklin_note.md new file mode 100644 index 0000000..e914475 --- /dev/null +++ b/docs/src/resources/franklin_note.md @@ -0,0 +1,65 @@ ++++ +title = "How Big Is a Chunk?" +slug = "notes" +tags = ["chunk", "memory", "bit", "unit", "bibliography", "archive"] +description = "An interesting foundation for the notion of 'chunking' in memory and education research" +rss_title = "How Big Is a Chunk?" +rss_description = "An interesting foundation for the notion of 'chunking' in memory and education research" +rss_pubdate = Date(2023, 1, 7) ++++ + + + +How Big Is a Chunk? +========= + +**Date:** January 7 2023 + +**Summary:** An interesting foundation for the notion of 'chunking' in memory and education research + +**Keywords:** #chunk #memory #bit #unit ##bibliography #archive + +Bibliography +========== + +H. A. Simon, "How Big Is a Chunk? By combining data from several experiments, a basic human memory unit can be identified and measured.," Science, vol. 183, no. 4124, pp. 482–488, 1974. + +Table of Contents +========= + +\toc + +### Reading Motivation + +In reading a piece by Michael Nielsen on using spaced repetition to process mathematics [1], he referenced a concept called "chunking". I hadn't encountered this notion in education research before and thought it sounded interesting. So, thus reading the paper. + +### What Are Chunks? + +Loosely based on [2], chunks are constructs which organize and group together units of information input into memory. These inputs can be of any form and the basic units could be things like phonemes in words, moves in chess, etc. that can then be recalled at once (a Bible verse, a Sicilian Defense, etc.). The material stored in a chunk is independent of how many chunks can be generated. + +### Benefits of Chunk Generation + +The memory span seems to be constrained by a fixed number of chunks (although this number varies wildly in the paper). However, we can increase the information stored in memory by increasing the number of units belonging to each chunk. [2] + +As regaled by Simon, an example of chunking in action is this: + +> I tried to recall after one reading the following list of words: Lincoln, milky, criminal, differential, address, way, lawyer, calculus, Gettysburg. I had no success whatsoever. I should not have expected success, for the list exceeded my span of six or seven words. Then I rearranged the list a bit, as follows: +> +> * Lincoln's Gettysburg Address +> * Milky Way +> * Criminal Lawyer +> * Differential Calculus +> +> I had no difficulty at all + + +The variance between chunks and memory can be attributed to larger chunk sizes based on one's expertise with a material. [4] +## References: + +[1] M. Nielsen, “Using spaced repetition systems to see through a piece of mathematics,” 2019. http://cognitivemedium.com/srs-mathematics + +[2] G. A. Miller, “The magical number seven, plus or minus two: Some limits on our capacity for processing information.” Psychol. Rev., vol. 63, no. 2, p. 81, 1956. + +[3] W. G. Chase and H. A. Simon, “The mind’s eye in chess,” in Visual information processing, Elsevier, 1973, pp. 215–281. + +[4] H. A. Simon and W. G. Chase, “American scientist,” Scientist, vol. 61, no. 4, pp. 394–403, 1973. diff --git a/docs/src/resources/ieee.csl b/docs/src/resources/ieee.csl new file mode 100644 index 0000000..04c375f --- /dev/null +++ b/docs/src/resources/ieee.csl @@ -0,0 +1,467 @@ + + diff --git a/docs/src/resources/mkd_franklin_tutorial_script.jl b/docs/src/resources/mkd_franklin_tutorial_script.jl new file mode 100644 index 0000000..38607fa --- /dev/null +++ b/docs/src/resources/mkd_franklin_tutorial_script.jl @@ -0,0 +1,53 @@ +using Dates +using NoteMate + +import Markdown: + Header, + plain + +note = read("note.md", String) + +citation_keys = find_citation_groups(note) +inline_citations_dict = create_inline_citations(citation_keys, "refs.bib", "ieee.csl") +note = replace(note, inline_citations_dict...) + +markdown_links = find_markdown_links(note, group_links = true) +relative_links_dict = create_relative_links(markdown_links["relative_links"]) +note = replace(note, relative_links_dict...) + +parsed_note = Markdown.parse(note) + +note_headers = get_headers(parsed_note.content) +title_header = filter(x -> typeof(x) <: Header{1}, note_headers) +section_headers = filter(x -> typeof(x) <: Header{2}, note_headers) + +sections = get_sections(parsed_note.content, section_headers; name_sections=true) +title_section = get_title_section(parsed_note.content, title_header; name_sections=true) +references_section = create_references(citation_keys, "refs.bib", "ieee.csl") +note_sections = merge!(sections, title_section) +note_sections["References"] = (note_sections["References"][1] |> plain) * "\n" * references_section |> Markdown.parse |> x -> x.content + +title_section = note_sections["Title"] +bibliography_section = note_sections["Bibliography"][2] |> plain +notes_section = note_sections["Notes"][2:end] |> plain +references_section = note_sections["References"] |> plain + +title = title_section[1].text[1] |> x -> replace(x, "\"" => "'") +date = title_section[2].content[2] |> strip +summary = title_section[3].content[2] |> strip |> x -> replace(x, "\"" => "'") +keywords = title_section[4].content[2] |> strip + +note = Note(title, date, summary, keywords, bibliography_section, references_section, notes_section, basename("notes.md"), "notes.md", "ieee.csl", "refs.bib") + +franklin_note_raw = create_franklin_note(note) + +franklin_note = "" +franklin_note = franklin_note * generate_franklin_template(title=franklin_note_raw.title, slug=franklin_note_raw.slug, tags=franklin_note_raw.tags, description=franklin_note_raw.description, rss_title=franklin_note_raw.rss_title, rss_description=franklin_note_raw.rss_description, rss_pubdate=franklin_note_raw.rss_pubdate) + +franklin_note = franklin_note * generate_note_summary(franklin_note_raw) +franklin_note = franklin_note * generate_bibliography(franklin_note_raw) +franklin_note = franklin_note * generate_table_of_contents() +franklin_note = franklin_note * franklin_note_raw.notes +franklin_note = franklin_note * generate_references(franklin_note_raw) + +write("franklin_note.md", franklin_note) diff --git a/docs/src/resources/note.txt b/docs/src/resources/note.txt new file mode 100644 index 0000000..532159e --- /dev/null +++ b/docs/src/resources/note.txt @@ -0,0 +1,46 @@ +# How Big Is a Chunk? + +**Date:** January 07 2023 + +**Summary:** An interesting foundation for the notion of "chunking" in memory and education research + +**Keywords:** #chunk #memory #bit #unit ##bibliography #archive + +## Bibliography + +H. A. Simon, "How Big Is a Chunk? By combining data from several experiments, a basic human memory unit can be identified and measured.," Science, vol. 183, no. 4124, pp. 482–488, 1974. + +## Notes + +### Reading Motivation + +In reading a piece by Michael Nielsen on using spaced repetition to process mathematics [@nielsenUsingSpacedRepetition2019], he referenced a concept called "chunking". +I hadn't encountered this notion in education research before and thought it sounded interesting. +So, thus reading the paper. + +### What Are Chunks? + +Loosely based on [@miller1956magical], chunks are constructs which organize and group together units of information input into memory. +These inputs can be of any form and the basic units could be things like phonemes in words, moves in chess, etc. that can then be recalled at once (a Bible verse, a Sicilian Defense, etc.). +The material stored in a chunk is independent of how many chunks can be generated. + +### Benefits of Chunk Generation + +The memory span seems to be constrained by a fixed number of chunks (although this number varies wildly in the paper). +However, we can increase the information stored in memory by increasing the number of units belonging to each chunk. +[@miller1956magical] + +As regaled by Simon, an example of chunking in action is this: + +> I tried to recall after one reading the following list of words: Lincoln, milky, criminal, differential, address, way, lawyer, calculus, Gettysburg. I had no success whatsoever. I should not have expected success, for the list exceeded my span of six or seven words. Then I rearranged the list a bit, as follows: +> +> - Lincoln's Gettysburg Address +> - Milky Way +> - Criminal Lawyer +> - Differential Calculus +> +> I had no difficulty at all + +The variance between chunks and memory can be attributed to larger chunk sizes based on one's expertise with a material. [@chase1973mind, @simon1973american] + +## References: diff --git a/docs/src/resources/refs.bib b/docs/src/resources/refs.bib new file mode 100644 index 0000000..9ef78c0 --- /dev/null +++ b/docs/src/resources/refs.bib @@ -0,0 +1,38 @@ +@online{nielsenUsingSpacedRepetition2019, + title = {Using Spaced Repetition Systems to See through a Piece of Mathematics}, + author = {Nielsen, Michael}, + date = {2019}, + url = {http://cognitivemedium.com/srs-mathematics} +} + +@article{miller1956magical, + title = {The Magical Number Seven, plus or Minus Two: {{Some}} Limits on Our Capacity for Processing Information.}, + author = {Miller, George A}, + date = {1956}, + journaltitle = {Psychological review}, + shortjournal = {Psychol. Rev.}, + volume = {63}, + number = {2}, + pages = {81}, + publisher = {{American Psychological Association}} +} + +@incollection{chase1973mind, + title = {The Mind's Eye in Chess}, + booktitle = {Visual Information Processing}, + author = {Chase, William G and Simon, Herbert A}, + date = {1973}, + pages = {215--281}, + publisher = {{Elsevier}} +} + +@article{simon1973american, + title = {American Scientist}, + author = {Simon, Herbert A and Chase, William G}, + date = {1973}, + journaltitle = {Scientist (Philadelphia, Pa.)}, + shortjournal = {Scientist}, + volume = {61}, + number = {4}, + pages = {394--403} +} diff --git a/docs/src/structure.md b/docs/src/structure.md new file mode 100644 index 0000000..e9a5af6 --- /dev/null +++ b/docs/src/structure.md @@ -0,0 +1,15 @@ +# Structure of NoteMate + +NoteMate is structured on the concept of the [Open Knowledge Model (OKM)](https://jacobzelko.com/04172022033744-open-knowledge-standard/) which is an open specification that minimally prescribes the structure of notes ingested by NoteMate. +To process notes that are compliant with the OKM, NoteMate offers three main components: + +- **Input Parsing** - parsing tools for various note structures and filetypes. + +- **Intermediate Structures** - internal and external objects defined by NoteMate. + +- **Target Outputs** - tools for generating an output made to a specific target. + +At its core, NoteMate is a toolbox for transforming information into various outputs with a focus on personal notes. +It is designed to be flexible enough so that one can adapt personal note structures into targets supported by NoteMate while sufficiently constrained to have well-defined APIs that can be consumed in other packages or projects more readily. + + diff --git a/pull_request_template.md b/pull_request_template.md new file mode 100644 index 0000000..c60cfa6 --- /dev/null +++ b/pull_request_template.md @@ -0,0 +1,20 @@ +## PR Checklist + +If you are contributing to `NoteMate.jl`, please make sure you are able to check off each item on this list: + +- [ ] Did I update `CHANGELOG.md` with whatever changes/features I added with this PR? +- [ ] Did I make sure to only change the part of the file where I introduced a new change/feature? +- [ ] Did I cover all corner cases to be close to 100% test coverage (if applicable)? +- [ ] Did I properly add `NoteMate.jl` dependencies to the `Project.toml` & set an upper bound of the dependency (if applicable)? +- [ ] Did I properly add test dependencies to the `test` directory (if applicable)? +- [ ] Did I check relevant tutorials that may be affected by changes in this PR? +- [ ] Did I clearly articulate why this PR was made the way it was and how it was made? + +**Link to relevant issue(s)** +Closes # + + +**Explain what this PR adds or addresses within `NoteMate.jl`** + + + diff --git a/src/NoteMate.jl b/src/NoteMate.jl index 627c9f1..3804e98 100644 --- a/src/NoteMate.jl +++ b/src/NoteMate.jl @@ -1,7 +1,5 @@ module NoteMate -using CSV -using DataFrames import Dates: DateFormat, DateTime, @@ -16,6 +14,17 @@ import Markdown: parse using pandoc_jll +""" + sync_file + +On a unix system, copy a source file to a target file if the modification times of the files are not equal. + +Requires the `cp -p` command to run successfully. + +# Arguments +- `src`: the source file to copy from +- `tgt`: the target file to copy to +""" function sync_file(src, tgt) if verify_template(src) == false diff --git a/src/markdown/parser.jl b/src/markdown/parser.jl index e0752b3..914ca93 100644 --- a/src/markdown/parser.jl +++ b/src/markdown/parser.jl @@ -130,10 +130,37 @@ function create_relative_links(link_strings; prefix = "") return Dict(link_strings .=> revised_links) end +""" + get_headers() + +Finds all the MarkDown headers in a file's parse tree. + +# Arguments +- `contents`: The `Vector` of content structs of a MD struct from Julia standard library `Markdown.parse` + +# Returns +The vector of all headers in the parsed Markdown document +""" function get_headers(contents) filter(x -> typeof(x) <: Header, contents) end +""" + get_sections + +Separate a whole parsed Markdown document into blocks of the text between headers. + +# Arguments +- `contents`: The `Vector` of content structs of a MD struct from Julia standard library `Markdown.parse` +- `headers`: Vector of `Header` structs that are found in the submitted document + +# Keyword Arguments +- `name_sections = true`: boolean setting to get a dictionary instead of a vector. + +# Returns +- By default, a dictionary of the headers first word as key and the sections between the headers +- A Vector of all section texts between the headers of the document +""" function get_sections(contents, headers; name_sections = true) sections = [] section_names = [] @@ -161,6 +188,23 @@ function get_sections(contents, headers; name_sections = true) end end +""" + get_title_section + +Get the sections that sit underneath title headers. + +# Arguments +- `contents`: The `Vector` of content structs of a MD struct from Julia standard library `Markdown.parse` +- `title_headers`: Vector of `Header` structs that are considered title headers + +# Keyword Arguments +- `name_sections = true`: boolean setting to get a dictionary instead of a vector. + +# Returns +- By default, a dictionary of the title section under the "Title" key +- A Vector of all section texts started by title headers + +""" function get_title_section(contents, title_header; name_sections = true) sections = [] section_names = [] diff --git a/src/structs.jl b/src/structs.jl index 146baf2..9b3a03a 100644 --- a/src/structs.jl +++ b/src/structs.jl @@ -1,5 +1,9 @@ """ Struct representing a note in Zettelkasten + +The generic Open Knowledge Model note with its key structures, isolated as single strings and some further metadata in appropiate +types. Within the constraints of NoteMate this is the generic type to which any note from any specific format parses down, and from +which other note structures for representation targets are build using templating functions. """ struct Note title::Any @@ -16,7 +20,12 @@ struct Note end """ -Struct representing a `Note` to be deployed to a Franklin website + FranklinNote + +Struct representing a `Note` to be deployed to a Franklin website. + +A `note` headed for expression as a Franklin markdown and then a webpage requires additional metadata demanded by Franklin to + execute the whole conversion, including information for the RSS feed. """ struct FranklinNote title::Any # Note.title diff --git a/src/targets/franklin.jl b/src/targets/franklin.jl index e84caee..54ff83f 100644 --- a/src/targets/franklin.jl +++ b/src/targets/franklin.jl @@ -1,5 +1,19 @@ """ -TODO: ADD DOCS + create_franklin_note(note::Note; date_format::String = "U d y") + +Transform a generic `Note` into a `[FranklinNote](@ref)` data structure with special metadata from `Note` content. + +# Arguments + +- `note`: a `Note` object that will be used for conversion + +# Keyword Arguments + +- `date_format`: a `String` that accepts a date format; default "U d y" (see: `Dates.format` for options) + +# Return + +- A newly prepared `FranklinNote` object """ function create_franklin_note(note::Note; date_format::String="U d y") title = note.title @@ -35,7 +49,42 @@ function create_franklin_note(note::Note; date_format::String="U d y") end """ -TODO: ADD DOCS + generate_franklin_template() + +Generates a template for a Franklin markdown page. + +# Keyword Arguments + +- `title`: Page title. Default is `nothing` +- `slug`: Specifies web page url path (after base path). Default is `nothing` +- `tags`: Keywords or tags associated with page. Default is `nothing` +- `description`: Description of page contents. Default is `nothing` +- `rss_title`: Page title that shows up on RSS feeds. Default is `nothing` +- `rss_description`: Description that goes along with RSS updates. Default is `nothing` +- `rss_pubdate`: Publication date for RSS feed. Default is `nothing` + +These kwargs are "page variables" that come directly from `Franklin.jl`'s documentation. +For more specific details, please see [Page Variables](https://franklinjl.org/syntax/page-variables/) + +# Return + +- A `String` object that contains a valid Franklin template that can then be modified further + +# Example + +If the following call is made: `generate_franklin_template(; title = "All-Payer Claims Database", tags = ["apcd", "claims", "database"])`, the following string will be returned: +``` ++++ + +title = "All-Payer Claims Database" + +tags = ["zettel", "apcd", "claims", "database", "archive"] + ++++ + +``` +This can then be edited or formatted further as needed. + """ function generate_franklin_template(; title=nothing, slug=nothing, tags=nothing, description=nothing, rss_title=nothing, rss_description=nothing, rss_pubdate=nothing) @@ -75,7 +124,13 @@ function generate_franklin_template(; title=nothing, slug=nothing, tags=nothing, end """ -TODO: ADD DOCS + generate_comments() + +Generates a Fraklin page macro to embed a comments section into a page. + +# Return + +- A string containing a Franklin macro to add comments to a Franklin page. See [Franklin Utils](https://franklinjl.org/syntax/utils/) for more information. """ function generate_comments() """ @@ -86,7 +141,13 @@ function generate_comments() end """ -TODO: ADD DOCS + generate_table_of_contents() + +Generate a hyperlinked *Table of Contents* for a Franklin page. + +# Return + +- A string containing a Franklin macro to add a table of contents to a Franklin page. See [Table of Contents](https://franklinjl.org/syntax/markdown/index.html#table_of_contents) for more information. """ function generate_table_of_contents() """ @@ -95,14 +156,45 @@ function generate_table_of_contents() end """ -TODO: ADD DOCS + generate_bibliography + +Generate a bibliography section for a Franklin page. + +# Arguments + +- `note`: a `FranklinNote` struct whose bibliography string will be included in the output + +# Return +- a string starting with a Fraklin section header, followed after a double newline by the bibliography string stored in the note struct. + """ function generate_bibliography(note::FranklinNote) "\nBibliography\n==========\n\n" * note.bibliography end """ -TODO: ADD DOCS + generate_note_summary + +Generate a note summary section using note title, publishing date, rss summary and any keywords. + +# Arguments + +- `note`: a `FranklinNote` struct whose information is formated for the note summary section + +# Return +- a string formated according to the Open Knowledge Model standard for Franklin, starting with a note title, followed by the Date in `monthname day year` form, the RSS summary of the note, and comma-separated keywords for the note. +An example formating: +``` +Example title: +========= + +**Date:** May 12 2020 + +**Summary:** This is the summary of an example note + +**Keywords:** example files, demonstration, documentation +``` + """ function generate_note_summary(note::FranklinNote) date = Date(note.rss_pubdate...) @@ -114,24 +206,55 @@ function generate_note_summary(note::FranklinNote) **Date:** $(monthname(date)) $(day(date)) $(year(date)) **Summary:** $(note.rss_description) - + **Keywords:** $(note.keywords) """ end """ -TODO: ADD DOCS + generate_references + +Returns the references string for the note. + +# Arguments + +- `note`: a `FranklinNote` struct whose references string will be included in the output + +# Return +- the note references string as is, without further formating + """ function generate_references(note::FranklinNote) note.references end +""" + generate_citation() + +Generate the citation string that can be used to reference the page of this document. + +# Arguments + +- `note`: a `FranklinNote` struct whose information will be used to format the citation strings + +# Keyword Arguments +- `citations` : TODO clarify type and structure here + +# Return +Return string always begin with `## How to Cite\\n\\n` followed by either: +- if the citation argument is empty, returns a standard citation string with primary author name, note title, homepage link and `monthname day year` date. +- if the citation argument is non-empty, will generate a longer citation string with list of all authors before note title, homepage link and `monthname day year` date. + + +FIXME: This is currently hardcoded for my own personal website. We need to adjust this to not be that way. +""" function generate_citation(note::FranklinNote; citations="") date = Date(note.rss_pubdate...) if isempty(citations) + # FIXME remove hardcoding page_citation = "Zelko, Jacob. _$(strip(note.title))_" * ". " * "[https://jacobzelko.com/$(note.slug)](https://jacobzelko.com/$(note.slug)). " * "$(monthname(date)) $(day(date)) $(year(date)).\n" return """## How To Cite\n\n $(page_citation)""" @@ -152,6 +275,7 @@ function generate_citation(note::FranklinNote; citations="") author = split(authors[end]) page_citation = page_citation * "$(join(author[2:end])), $(author[1]). " + # FIXME remove hardcoding page_citation = "Zelko, Jacob. _$(strip(note.title))_" * ". " * "[https://jacobzelko.com/$(note.slug)](https://jacobzelko.com/$(note.slug)). " * "$(monthname(date)) $(day(date)) $(year(date)).\n" return """## How To Cite\n\n $(page_citation)""" @@ -159,6 +283,7 @@ function generate_citation(note::FranklinNote; citations="") else + # FIXME remove hardcoding page_citation = "Zelko, Jacob. _$(strip(note.title))_" * ". " * "[https://jacobzelko.com/$(note.slug)](https://jacobzelko.com/$(note.slug)). " * "$(monthname(date)) $(day(date)) $(year(date)).\n" return """## How To Cite\n\n $(page_citation)""" diff --git a/test/Project.toml b/test/Project.toml index 0c36332..ff66989 100644 --- a/test/Project.toml +++ b/test/Project.toml @@ -1,2 +1,3 @@ [deps] +Markdown = "d6f4376e-aef5-505a-96c1-9c027394607a" Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" diff --git a/test/assets/ieee.csl b/test/assets/ieee.csl new file mode 100644 index 0000000..04c375f --- /dev/null +++ b/test/assets/ieee.csl @@ -0,0 +1,467 @@ + + diff --git a/test/assets/test_note.md b/test/assets/test_note.md new file mode 100644 index 0000000..169b706 --- /dev/null +++ b/test/assets/test_note.md @@ -0,0 +1,53 @@ +# Brain Imaging Data Structure (BIDS) + +**Date:** November 5 2020 + +**Summary:** An overview of the BIDS style for Brain Imaging Data. + +**Keywords:** ##zettel #bids #neuroscience #brain #imaging #archive + +## Bibliography + +Not Available + + +## Note Linked From: + +- [NeuriViz Project](10152020223819-neuriviz-project.md) - An on-going experiment into developing performant neuroscientific visualizations via Julia. + +## Notes + +### Purpose + +A core problem regarding reproducible neuroscience is that there has been no widely adopted standard for describing data from an imaging experiment. +This renders sharing and reusing data difficult.[@gorgolewskiBrainImagingData2016] +Furthermore, it complicates automation and quality assurance. + +The BIDS format was inspired by the work done by the [OpenNeuro](https://openneuro.org/) community to easily share and structure their data regarding pertaining to neuroscientific research. +It enables development of automated tools to operate on datasets. [@gorgolewskiBrainImagingData2016] +Common standards minimize curation! +Helps those not involved to effectively understand the data. + +### Specific data specifications: + +- Raw data derivatives should be separate from source data. + +- The NIfTI image file format was selected as it is the most ubiquitous across neuroimaging software.BIDS requires users to provide additional meta information in a sidecar JSON file. + +- Metadata is generally stored as an array in tab-delimited values. + +- JSON files are used for storing key/value pairs. +The key names follow a fixed dictionary in the specification. + + + +### Topics + +Neuroimaging: brain imaging to gain quantitative brain data. [@gorgolewskiBrainImagingData2016] + +Error reduction: errors attributed to misunderstanding data. + +Provenance: information regarding actions or those involved in producing an object. +It can be used to form assessments about its valour. + +## References diff --git a/test/assets/zettel.bib b/test/assets/zettel.bib new file mode 100644 index 0000000..d37b682 --- /dev/null +++ b/test/assets/zettel.bib @@ -0,0 +1,10696 @@ +@misc{2022OHDSISymposium, + title = {2022 {{OHDSI Symposium}}}, + file = {/home/cedarprince/Zotero/storage/4V4AL3DM/conference_agenda.pdf} +} + +@online{510PremarketNotification, + title = {510(k) {{Premarket Notification}}}, + url = {https://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfpmn/pmn.cfm}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/UTNBSRG7/pmn.html} +} + +@online{510PremarketNotificationa, + title = {510(k) {{Premarket Notification}}}, + url = {https://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfPMN/pmn.cfm?ID=K172935}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/3NIN8BLH/pmn.html} +} + +@article{abbott2020estimating, + title = {Estimating the Time-Varying Reproduction Number of {{SARS-CoV-2}} Using National and Subnational Case Counts}, + author = {Abbott, Sam and Hellewell, Joel and Thompson, Robin N and Sherratt, Katharine and Gibbs, Hamish P and Bosse, Nikos I and Munday, James D and Meakin, Sophie and Doughty, Emma L and Chun, June Young and others}, + date = {2020}, + journaltitle = {Wellcome Open Research}, + shortjournal = {Wellcome Open Res.}, + volume = {5}, + number = {112}, + pages = {112}, + publisher = {{F1000 Research Limited}} +} + +@article{abelOrwellBigBrother18, + title = {Orwell’s ‘{{Big Brother}}’ Is Already in Millions of Homes. {{Her}} Name Is {{Alexa}}.}, + author = {Abel, Allen}, + date = {0018-01-17}, + journaltitle = {Maclean's}, + url = {http://www.macleans.ca/society/technology/amazon-alexa-google-home-privacy-surveillance/}, + urldate = {2018-02-04}, + entrysubtype = {newspaper}, + keywords = {\#nosource} +} + +@misc{AbnormalInvoluntaryMovement, + title = {Abnormal {{Involuntary Movement Scale}} ({{AIMS}})}, + keywords = {schizophrenia}, + file = {/home/src/Offline/Papers/abnormal involuntary movement scale (aims).pdf} +} + +@incollection{abowdDesigningHumanExperience2005, + title = {Designing for the {{Human Experience}} in {{Smart Environments}}}, + booktitle = {Smart {{Environments}}}, + author = {Abowd, Gregory D. and Mynatt, Elizabeth D.}, + editor = {Cook, Diane J. and Das, Sajal K.}, + date = {2005-01-28}, + pages = {151--174}, + publisher = {{John Wiley \& Sons, Inc.}}, + location = {{Hoboken, NJ, USA}}, + doi = {10.1002/047168659X.ch7}, + isbn = {978-0-471-68659-0 978-0-471-54448-7}, + langid = {english}, + file = {/home/src/Offline/Papers/abowd_mynatt_2005_designing for the human experience in smart environments.pdf} +} + +@article{acker2006inequality, + title = {Inequality Regimes: {{Gender}}, Class, and Race in Organizations}, + author = {Acker, Joan}, + date = {2006}, + journaltitle = {Gender \& society}, + shortjournal = {Gend. Soc.}, + volume = {20}, + number = {4}, + pages = {441--464}, + publisher = {{Sage Publications Sage CA: Thousand Oaks, CA}} +} + +@report{adalovelaceinstituteAdaLovelaceInstitute2020, + title = {Ada {{Lovelace Institute Rapid Evidence Review}}: {{Exit}} through the {{App Store}}?}, + author = {{Ada Lovelace Institute}}, + date = {2020-04-20}, + institution = {{Ada Lovelace Institute}}, + url = {https://www.adalovelaceinstitute.org/wp-content/uploads/2020/04/Ada-Lovelace-Institute-Rapid-Evidence-Review-Exit-through-the-App-Store-April-2020-2.pdf}, + urldate = {2020-11-09}, + file = {/home/cedarprince/Zotero/storage/IBZ6X85G/Ada-Lovelace-Institute-Rapid-Evidence-Review-Exit-through-the-App-Store-April-2020-2.pdf} +} + +@article{adam2020clustering, + title = {Clustering and Superspreading Potential of Severe Acute Respiratory Syndrome Coronavirus 2 ({{SARS-CoV-2}}) Infections in {{Hong Kong}}}, + author = {Adam, Dillon and Wu, Peng and Wong, Jessica and Lau, Eric and Tsang, Tim and Cauchemez, Simon and Leung, Gabriel and Cowling, Benjamin}, + date = {2020} +} + +@article{adkins-jacksonMeasuringStructuralRacism2022, + title = {Measuring {{Structural Racism}}: {{A Guide}} for {{Epidemiologists}} and {{Other Health Researchers}}}, + shorttitle = {Measuring {{Structural Racism}}}, + author = {Adkins-Jackson, Paris B and Chantarat, Tongtan and Bailey, Zinzi D and Ponce, Ninez A}, + date = {2022-03-24}, + journaltitle = {American Journal of Epidemiology}, + shortjournal = {Am. J. Epidemiol.}, + volume = {191}, + number = {4}, + pages = {539--547}, + issn = {0002-9262, 1476-6256}, + doi = {10.1093/aje/kwab239}, + abstract = {Abstract There have been over 100 years of literature discussing the deleterious influence of racism on health. Much of the literature describes racism as a driver of social determinants of health, such as housing, employment, income, and education. More recently, increased attention has been given to measuring the structural nature of a system that advantages one racialized group over others rather than solely relying on individual acknowledgement of racism. Despite these advances, there is still a need for methodological and analytical approaches to complement the aforementioned. This commentary calls on epidemiologists and other health researchers at large to engage the discourse on measuring structural racism. First, we address the conflation between race and racism in epidemiologic research. Next, we offer methodological recommendations (linking of interdisciplinary variables and data sets and leveraging mixed-method and life-course approaches) and analytical recommendations (integration of mixed data, use of multidimensional models) that epidemiologists and other health researchers may consider in health equity research. The goal of this commentary is to inspire the use of up-to-date and theoretically driven approaches to increase discourse among public health researchers on capturing racism as well as to improve evidence of its role as the fundamental cause of racial health inequities.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/WEW9C8XG/Adkins-Jackson et al_2022_Measuring Structural Racism.pdf} +} + +@article{adler2005self, + title = {Self-Injurers as Loners: {{The}} Social Organization of Solitary Deviance}, + author = {Adler, Patricia A and Adler, Peter}, + date = {2005}, + journaltitle = {Deviant Behavior}, + shortjournal = {Deviant Behav.}, + volume = {26}, + number = {4}, + pages = {345--378}, + publisher = {{Taylor \& Francis}} +} + +@article{aeschbacher2017heart, + title = {Heart Rate, Heart Rate Variability and Inflammatory Biomarkers among Young and Healthy Adults}, + author = {Aeschbacher, Stefanie and Schoen, Tobias and Dörig, Laura and Kreuzmann, Rahel and Neuhauser, Charlotte and Schmidt-Trucksäss, Arno and Probst-Hensch, Nicole M and Risch, Martin and Risch, Lorenz and Conen, David}, + date = {2017}, + journaltitle = {Annals of medicine}, + shortjournal = {Ann. Med.}, + volume = {49}, + number = {1}, + pages = {32--41}, + publisher = {{Taylor \& Francis}} +} + +@online{agencyforhealthcareresearchandqualityAllPayerClaimsDatabases2018, + title = {All-{{Payer Claims Databases}}}, + author = {{Agency for Healthcare Research and Quality}}, + date = {2018-02}, + url = {https://www.ahrq.gov/data/apcd/index.html}, + langid = {english}, + organization = {{Agency for Healthcare Research and Quality}}, + file = {/home/cedarprince/Zotero/storage/5BWX2FAM/All-Payer Claims Databases.pdf} +} + +@book{ahrensHowTakeSmart2017, + title = {How to {{Take Smart Notes}}: {{One Simple Technique}} to {{Boost Writing}}, {{Learning}} and {{Thinking}} – for {{Students}}, {{Academics}} and {{Nonfiction Book Writers}}}, + author = {Ahrens, Sönke}, + date = {2017}, + langid = {english}, + file = {/home/src/Offline/Papers/ahrens_2017_how to take smart notes.pdf} +} + +@online{AigoAiLaunches, + title = {Aigo.Ai {{Launches Visionary Community Where You Can Use}}, {{Create}} and {{Trade Intelligence}} with {{Revolutionary AI Personal Assistant}}}, + url = {https://seekingalpha.com/pr/17183010-aigo-ai-launches-visionary-community-can-use-create-trade-intelligence-revolutionary-ai}, + urldate = {2018-06-10}, + langid = {english}, + organization = {{Seeking Alpha}}, + keywords = {artificial-intelligence,human-centered-ai}, + file = {/home/cedarprince/Zotero/storage/FMYB79WX/17183010-aigo-ai-launches-visionary-community-can-use-create-trade-intelligence-revolutionary-a.html} +} + +@article{akinhanmiRacialDisparitiesBipolar2018, + title = {Racial Disparities in Bipolar Disorder Treatment and Research: A Call to Action}, + shorttitle = {Racial Disparities in Bipolar Disorder Treatment and Research}, + author = {Akinhanmi, Margaret O. and Biernacka, Joanna M. and Strakowski, Stephen M. and McElroy, Susan L. and Balls Berry, Joyce E. and Merikangas, Kathleen R. and Assari, Shervin and McInnis, Melvin G. and Schulze, Thomas G. and LeBoyer, Marion and Tamminga, Carol and Patten, Christi and Frye, Mark A.}, + date = {2018-09}, + journaltitle = {Bipolar Disorders}, + shortjournal = {Bipolar Disord}, + volume = {20}, + number = {6}, + eprint = {29527766}, + eprinttype = {pmid}, + pages = {506--514}, + issn = {1399-5618}, + doi = {10.1111/bdi.12638}, + abstract = {OBJECTIVES: Health disparities between individuals of African and European ancestry are well documented. The disparities in bipolar disorder may be driven by racial bias superimposed on established factors contributing to misdiagnosis, including: evolving empirically based diagnostic criteria (International Classification of Diseases [ICD], Research Diagnostic Criteria [RDC] and Diagnostic and Statistical Manual [DSM]), multiple symptom domains (i.e. mania, depression and psychosis), and multimodal medical and additional psychiatric comorbidity. METHODS: For this paper, we reviewed the phenomenological differences between bipolar individuals of African and European ancestry in the context of diagnostic criteria and clinical factors that may contribute to a potential racial bias. RESULTS: Published data show that bipolar persons of African ancestry, compared with bipolar persons of non-African ancestry, are more often misdiagnosed with a disease other than bipolar disorder (i.e. schizophrenia). Additionally, studies show that there are disparities in recruiting patients of African ancestry to participate in important genomic studies. This gap in biological research in this underrepresented minority may represent a missed opportunity to address potential racial differences in the risk and course of bipolar illness. CONCLUSION: A concerted effort by the research community to increase inclusion of diverse persons in studies of bipolar disorder through community engagement may facilitate fully addressing these diagnostic and treatment disparities in bipolar individuals of African ancestry.}, + langid = {english}, + pmcid = {PMC6175457}, + keywords = {African ancestry,bipolar disorder,Bipolar Disorder,Blacks,Comorbidity,Diagnostic and Statistical Manual of Mental Disorders,Genomics,health/racial disparities,Healthcare Disparities,Humans,Minority Groups,minority research participation,Patient Selection,Psychotic Disorders,Research,Schizophrenia,Whites}, + file = {/Users/jzelko3/Knowledgebase/Papers/Akinhanmi et al_2018_Racial disparities in bipolar disorder treatment and research.pdf} +} + +@article{aklAutonomousUnobtrusiveDetection2015, + title = {Autonomous {{Unobtrusive Detection}} of {{Mild Cognitive Impairment}} in {{Older Adults}}}, + author = {Akl, Ahmad and Taati, Babak and Mihailidis, Alex}, + date = {2015-05}, + journaltitle = {IEEE Transactions on Biomedical Engineering}, + shortjournal = {IEEE Trans. Biomed. Eng.}, + volume = {62}, + number = {5}, + pages = {1383--1394}, + issn = {0018-9294, 1558-2531}, + doi = {10.1109/TBME.2015.2389149}, + abstract = {The current diagnosis process of dementia is resulting in a high percentage of cases with delayed detection. To address this problem, in this paper, we explore the feasibility of autonomously detecting mild cognitive impairment (MCI) in the older adult population. We implement a signal processing approach equipped with a machine learning paradigm to process and analyze real-world data acquired using home-based unobtrusive sensing technologies. Using the sensor and clinical data pertaining to 97 subjects, acquired over an average period of three years, a number of measures associated with the subjects’ walking speed and general activity in the home were calculated. Different time spans of these measures were used to generate feature vectors to train and test two machine learning algorithms namely support vector machines and random forests. We were able to autonomously detect MCI in older adults with an area under the ROC curve of 0.97 and an area under the precision-recall curve of 0.93 using a time window of 24 weeks. This study is of great significance since it can potentially assist in the early detection of cognitive impairment in older adults.}, + langid = {english}, + file = {/home/src/Offline/Papers/akl et al_2015_autonomous unobtrusive detection of mild cognitive impairment in older adults.pdf} +} + +@article{akobirshoevInhospitalMortalityAdults2019, + title = {In-Hospital Mortality among Adults with Autism Spectrum Disorder in the {{United States}}: {{A}} Retrospective Analysis of {{US}} Hospital Discharge Data}, + shorttitle = {In-Hospital Mortality among Adults with Autism Spectrum Disorder in the {{United States}}}, + author = {Akobirshoev, Ilhom and Mitra, Monika and Dembo, Robbie and Lauer, Emily}, + date = {2019-06-12}, + journaltitle = {Autism}, + shortjournal = {Autism}, + pages = {136236131985579}, + issn = {1362-3613, 1461-7005}, + doi = {10.1177/1362361319855795}, + abstract = {A retrospective data analysis using 2004–2014 Healthcare Cost and Utilization Project Nationwide Inpatient Sample was conducted to examine in-hospital mortality among adults with autism spectrum disorders in the United States compared to individuals in the general population. We modeled logistic regressions to compare inpatient hospital mortality between adults with autism spectrum disorders (n\,=\,34,237) and age-matched and sex-matched controls (n\,=\,102,711) in a 1:3 ratio. Adults with autism spectrum disorders had higher odds for inpatient hospital mortality than controls (odds ratio\,=\,1.44, 95\% confidence interval: 1.29–1.61, p\,{$<$}\,0.001). This risk remained high even after adjustment for age, sex, race/ethnicity, income, number of comorbidities, epilepsy and psychiatric comorbidities, hospital bed size, hospital region, and hospitalization year (odds ratio\,=\,1.51, 95\% confidence interval: 1.33–1.72, p\,{$<$}\,0.001). Adults with autism spectrum disorders who experienced in-hospital mortality had a higher risk for having 10 out of 27 observed Elixhauser-based medical comorbidities at the time of death, including psychoses, other neurological disorders, diabetes, hypothyroidism, rheumatoid arthritis collagen vascular disease, obesity, weight loss, fluid and electrolyte disorders, deficiency anemias, and paralysis. The results from the interaction of sex and autism spectrum disorders status suggest that women with autism spectrum disorders have almost two times higher odds for in-hospital mortality (odds ratio\,=\,1.95, p\,{$<$}\,0.001) than men with autism spectrum disorders. The results from the stratified analysis also showed that women with autism spectrum disorders had 3.17 times higher odds (95\% confidence interval: 2.50–4.01, p\,{$<$}\,0.001) of in-hospital mortality compared to women from the non–autism spectrum disorders matched control group; this difference persisted even after adjusting for socioeconomic, clinical, and hospital characteristics (odds ratio\,=\,2.75, 95\% confidence interval: 2.09–3.64, p\,{$<$}\,0.001). Our findings underscore the need for more research to develop better strategies for healthcare and service delivery to people with autism spectrum disorders.}, + langid = {english}, + file = {/home/src/Offline/Papers/akobirshoev et al_2019_in-hospital mortality among adults with autism spectrum disorder in the united.pdf} +} + +@article{alcalaSocialDeterminantsHealth2017, + title = {Social {{Determinants}} of {{Health}}, {{Violent Radicalization}}, and {{Terrorism}}: {{A Public Health Perspective}}}, + shorttitle = {Social {{Determinants}} of {{Health}}, {{Violent Radicalization}}, and {{Terrorism}}}, + author = {Alcalá, Héctor E. and Sharif, Mienah Zulfacar and Samari, Goleen}, + date = {2017-08}, + journaltitle = {Health Equity}, + shortjournal = {Health Equity}, + volume = {1}, + number = {1}, + pages = {87--95}, + issn = {2473-1242}, + doi = {10.1089/heq.2016.0016}, + abstract = {Background: Terrorism-related deaths are at an all-time high as there were 32,685 and 29,376 terrorism-related deaths in 2014 and 2015, respectively. Terrorism is defined as the use of violence and intimidation in the pursuit of political aims. Terrorism is detrimental for mental health, premature mortality, and economic losses and undermines the central tenets of public health to improve the health and well-being of populations. Despite the impact terrorism has on avoidable morbidity and mortality, population health research largely overlooks social determinants of terrorism and risk factors that contribute to terrorist activities. Methods: Drawing from what is known about commonly studied social determinants of health topics, including the relationships between structural and interpersonal discrimination, social cohesion, and gang violence and health, we present a public health framework, rooted in the social determinants of health, for identifying potential factors influencing terrorism and violent radicalization. Results: Social determinants of health provide unique insight into how interpersonal and structural factors can influence risk for violent radicalization and terrorist activity. Each of the topics we review provides an entry point for existing public health and behavioral science knowledge to be used in preventing and understanding violent radicalization and terrorism. For example, anti-Muslim sentiment has promoted discrimination against Muslims, while also serving to marginalize and stigmatize Muslim communities. These conditions limit the social resources, like social cohesion, that Muslims have access to and make political violence more appealing to some. Conclusions: Public health can contribute much to the ongoing debate around terrorism. The field must take a more prevention-focused approach to the problem of terrorism. Failure to do so only perpetuates approaches that have not been successful.}, + langid = {english}, + file = {/home/src/Papers/alcalá et al_2017_social determinants of health, violent radicalization, and terrorism.pdf} +} + +@article{alcalaSocialDeterminantsHealth2017a, + title = {Social {{Determinants}} of {{Health}}, {{Violent Radicalization}}, and {{Terrorism}}: {{A Public Health Perspective}}}, + shorttitle = {Social {{Determinants}} of {{Health}}, {{Violent Radicalization}}, and {{Terrorism}}}, + author = {Alcalá, Héctor E. and Sharif, Mienah Zulfacar and Samari, Goleen}, + date = {2017-08}, + journaltitle = {Health Equity}, + shortjournal = {Health Equity}, + volume = {1}, + number = {1}, + pages = {87--95}, + issn = {2473-1242}, + doi = {10.1089/heq.2016.0016}, + abstract = {Background: Terrorism-related deaths are at an all-time high as there were 32,685 and 29,376 terrorism-related deaths in 2014 and 2015, respectively. Terrorism is defined as the use of violence and intimidation in the pursuit of political aims. Terrorism is detrimental for mental health, premature mortality, and economic losses and undermines the central tenets of public health to improve the health and well-being of populations. Despite the impact terrorism has on avoidable morbidity and mortality, population health research largely overlooks social determinants of terrorism and risk factors that contribute to terrorist activities. Methods: Drawing from what is known about commonly studied social determinants of health topics, including the relationships between structural and interpersonal discrimination, social cohesion, and gang violence and health, we present a public health framework, rooted in the social determinants of health, for identifying potential factors influencing terrorism and violent radicalization. Results: Social determinants of health provide unique insight into how interpersonal and structural factors can influence risk for violent radicalization and terrorist activity. Each of the topics we review provides an entry point for existing public health and behavioral science knowledge to be used in preventing and understanding violent radicalization and terrorism. For example, anti-Muslim sentiment has promoted discrimination against Muslims, while also serving to marginalize and stigmatize Muslim communities. These conditions limit the social resources, like social cohesion, that Muslims have access to and make political violence more appealing to some. Conclusions: Public health can contribute much to the ongoing debate around terrorism. The field must take a more prevention-focused approach to the problem of terrorism. Failure to do so only perpetuates approaches that have not been successful.}, + langid = {english}, + file = {/home/src/Papers/alcalá et al_2017_social determinants of health, violent radicalization, and terrorism2.pdf} +} + +@article{allenDataVisualizationNeurosciences2012, + title = {Data {{Visualization}} in the {{Neurosciences}}: {{Overcoming}} the {{Curse}} of {{Dimensionality}}}, + shorttitle = {Data {{Visualization}} in the {{Neurosciences}}}, + author = {Allen, Elena~A. and Erhardt, Erik~B. and Calhoun, Vince~D.}, + date = {2012-05}, + journaltitle = {Neuron}, + shortjournal = {Neuron}, + volume = {74}, + number = {4}, + pages = {603--608}, + issn = {08966273}, + doi = {10.1016/j.neuron.2012.05.001}, + langid = {english}, + file = {/home/src/Papers/allen et al_2012_data visualization in the neurosciences.pdf} +} + +@article{altman1994diagnostic, + title = {Diagnostic Tests. 1: {{Sensitivity}} and Specificity.}, + author = {Altman, Douglas G and Bland, J Martin}, + date = {1994}, + journaltitle = {BMJ: British Medical Journal}, + shortjournal = {BMJ}, + volume = {308}, + number = {6943}, + pages = {1552}, + publisher = {{BMJ Publishing Group}} +} + +@online{ambrosoftTwoCirclesIntersectionN.D., + title = {Two Circles Intersection Calculator}, + author = {{Ambrosoft}}, + year = {N.D.}, + url = {http://www.ambrsoft.com/TrigoCalc/Circles2/circle2intersection/CircleCircleIntersection.htm}, + urldate = {2020-04-28}, + file = {/home/cedarprince/Zotero/storage/YEC5RJ4F/CircleCircleIntersection.html} +} + +@article{ancoli-israelRoleActigraphyStudy2003, + title = {The {{Role}} of {{Actigraphy}} in the {{Study}} of {{Sleep}} and {{Circadian Rhythms}}}, + author = {Ancoli-Israel, Sonia and Cole, Roger and Alessi, Cathy and Chambers, Mark and Moorcroft, William and Pollak, Charles P.}, + date = {2003-05}, + journaltitle = {Sleep}, + volume = {26}, + number = {3}, + pages = {342--392}, + issn = {0161-8105, 1550-9109}, + doi = {10.1093/sleep/26.3.342}, + langid = {english}, + file = {/home/src/Offline/Papers/ancoli-israel et al_2003_the role of actigraphy in the study of sleep and circadian rhythms.pdf} +} + +@article{andesDiabetesPrevalenceIncidence2019, + title = {Diabetes {{Prevalence}} and {{Incidence Among Medicare Beneficiaries}} — {{United States}}, 2001–2015}, + author = {Andes, Linda J. and Li, Yanfeng and Srinivasan, Meera and Benoit, Stephen R. and Gregg, Edward and Rolka, Deborah B.}, + date = {2019-11-01}, + journaltitle = {MMWR. Morbidity and Mortality Weekly Report}, + shortjournal = {MMWR Morb. Mortal. Wkly. Rep.}, + volume = {68}, + number = {43}, + pages = {961--966}, + issn = {0149-2195, 1545-861X}, + doi = {10.15585/mmwr.mm6843a2}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/3B7BVYDJ/Andes et al. - 2019 - Diabetes Prevalence and Incidence Among Medicare B.pdf} +} + +@dataset{andreasenScaleAssessmentPositive2018, + title = {Scale for the {{Assessment}} of {{Positive Symptoms}}}, + author = {Andreasen, Nancy C.}, + date = {2018-06-11}, + publisher = {{American Psychological Association}}, + doi = {10.1037/t48377-000}, + langid = {english}, + keywords = {schizophrenia}, + file = {/home/src/Offline/Papers/andreasen_2018_scale for the assessment of positive symptoms.pdf} +} + +@online{AnkiPowerfulIntelligent, + title = {Anki - Powerful, Intelligent Flashcards}, + url = {https://apps.ankiweb.net/}, + urldate = {2020-06-07}, + file = {/home/cedarprince/Zotero/storage/E778FIUV/apps.ankiweb.net.html} +} + +@article{ansteyCohortProfilePATH2012a, + title = {Cohort {{Profile}}: {{The PATH}} through Life Project}, + shorttitle = {Cohort {{Profile}}}, + author = {Anstey, K. J. and Christensen, H. and Butterworth, P. and Easteal, S. and Mackinnon, A. and Jacomb, T. and Maxwell, K. and Rodgers, B. and Windsor, T. and Cherbuin, N. and Jorm, A. F.}, + date = {2012-08-01}, + journaltitle = {International Journal of Epidemiology}, + shortjournal = {International Journal of Epidemiology}, + volume = {41}, + number = {4}, + pages = {951--960}, + issn = {0300-5771, 1464-3685}, + doi = {10.1093/ije/dyr025}, + langid = {english}, + file = {/home/src/Offline/Papers/anstey et al_2012_cohort profile.pdf} +} + +@online{AppleWatchSeries, + title = {Apple {{Watch Series}} 5 - {{Apple}}}, + url = {https://www.apple.com/apple-watch-series-5/}, + urldate = {2019-12-10}, + file = {/home/cedarprince/Zotero/storage/6Q46KGJF/apple-watch-series-5.html} +} + +@article{arancibiaAntimicrobialAntioxidantChitosan2014, + title = {Antimicrobial and Antioxidant Chitosan Solutions Enriched with Active Shrimp ({{Litopenaeus}} Vannamei) Waste Materials}, + author = {Arancibia, Mirari Y. and Alemán, Ailén and Calvo, Marta M. and López-Caballero, M. Elvira and Montero, Pilar and Gómez-Guillén, M. Carmen}, + year = {2014/3/1/March 2014///}, + journaltitle = {Food Hydrocolloids}, + shortjournal = {Food Hydrocolloids}, + volume = {35}, + pages = {710--717}, + issn = {0268-005X}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0268005X13002695&site=eds-live&scope=site}, + abstract = {Several shrimp active materials, including protein concentrates, protein hydrolysates and a carotenoid extract, were recovered from shrimp (Litopenaeus vannamei) processing residues (head and exoskeleton) and characterized in terms of chemical composition and antioxidative properties (Ferric ion reducing power and ABTS radical scavenging capacity). Different coating solutions were prepared by solubilizing chitosan, which was obtained from the residual chitinous material, in lactic acid and blending it with the various recovered materials. Chitosan-based solutions were tested for their viscosity and their antioxidative and antimicrobial properties against 26 selected microbial strains. All blend solutions showed higher antioxidant capacity and reduced viscosity as compared to the base chitosan solution. The incorporation of an astaxanthin-rich protein concentrate increased the antimicrobial capacity of the blend solution, but no further effect was observed after extra addition of the carotenoid extract.}, + keywords = {\#nosource} +} + +@online{araujoAnimacoesEmJulia2020, + title = {Animações Em {{Julia}} Com o {{Javis}}.Jl}, + author = {Araújo, Adeil and Oliveira, Meirivâni}, + date = {2020-12-06}, + url = {https://juliacomfisica.github.io/menu2/#anima%C3%A7%C3%B5es_em_julia_com_o_javisjl}, + urldate = {2020-12-07}, + file = {/home/cedarprince/Zotero/storage/5DRYDBI9/menu2.html} +} + +@article{arbiaOptimizationMediumComposition2013, + title = {Optimization of Medium Composition for Enhanced Chitin Extraction from {{Parapenaeus}} Longirostris by {{Lactobacillus}} Helveticus Using Response Surface Methodology}, + author = {Arbia, W. and Adour, L. and Amrane, A. and Lounici, H.}, + year = {2013/6/1/June 2013///}, + journaltitle = {Food Hydrocolloids}, + shortjournal = {Food Hydrocolloids}, + volume = {31}, + pages = {392--403}, + issn = {0268-005X}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0268005X12002512&site=eds-live&scope=site}, + abstract = {Chitin extraction by biological way, using the lactobacilli Lactobacillus helveticus, is a non-polluting method and offers the opportunity to preserve the exceptional qualities of chitin and its derivatives. However, the major disadvantage of the fermentative way is the low efficiency of demineralization and deproteinization. The aim of our study is to improve the yield of extraction. Many factors, such as the initial concentration of carbon source, fermentation time, incubation temperature, inoculum size, shell size, volume and medium composition have been reported to influence the fermentation process and consequently demineralization and deproteinization efficiency. Based on the use of central composite design and response surface methodology ten factors with three levels each were examined to determine the optimal operational conditions of demineralization and deproteinization. The analysis of the obtained results showed that the optimal conditions of 98\% of demineralization and 78\% of deproteinisation are 171.4~g~L−1 of reducing sugars, 2.03~g of nitrogen source [(NH4)2Fe(SO4)2] and 1.29~g of calcium source (CaCl2), used to ferment 4.84~g of shells, of 1.053~mm size heat treated at 120~°C, with 10~mL of inoculum (L.~helveticus) incubated at 32.1~°C in 100~mL of juice date for 254.38~h (15 days).}, + keywords = {\#nosource} +} + +@unpublished{ardilaCommonVoiceMassivelyMultilingual2019, + title = {Common {{Voice}}: {{A Massively-Multilingual Speech Corpus}}}, + shorttitle = {Common {{Voice}}}, + author = {Ardila, Rosana and Branson, Megan and Davis, Kelly and Henretty, Michael and Kohler, Michael and Meyer, Josh and Morais, Reuben and Saunders, Lindsay and Tyers, Francis M. and Weber, Gregor}, + date = {2019-12-13}, + shortjournal = {ArXiv191206670 Cs}, + eprint = {1912.06670}, + eprinttype = {arxiv}, + primaryclass = {cs}, + url = {http://arxiv.org/abs/1912.06670}, + urldate = {2020-02-10}, + abstract = {The Common Voice corpus is a massively-multilingual collection of transcribed speech intended for speech technology research and development. Common Voice is designed for Automatic Speech Recognition purposes but can be useful in other domains (e.g. language identification). To achieve scale and sustainability, the Common Voice project employs crowdsourcing for both data collection and data validation. The most recent release includes 29 languages, and as of November 2019 there are a total of 38 languages collecting data. Over 50,000 individuals have participated so far, resulting in 2,500 hours of collected audio. To our knowledge this is the largest audio corpus in the public domain for speech recognition, both in terms of number of hours and number of languages. As an example use case for Common Voice, we present speech recognition experiments using Mozilla’s DeepSpeech Speech-to-Text toolkit. By applying transfer learning from a source English model, we find an average Character Error Rate improvement of 5.99 ± 5.48 for twelve target languages (German, French, Italian, Turkish, Catalan, Slovenian, Welsh, Irish, Breton, Tatar, Chuvash, and Kabyle). For most of these languages, these are the first ever published results on end-to-end Automatic Speech Recognition.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {Computer Science - Computation and Language,Computer Science - Machine Learning}, + file = {/home/src/Offline/Papers/ardila et al_2019_common voice.pdf} +} + +@article{arigaBriefRareMental2011, + title = {Brief and Rare Mental “Breaks” Keep You Focused: {{Deactivation}} and Reactivation of Task Goals Preempt Vigilance Decrements}, + shorttitle = {Brief and Rare Mental “Breaks” Keep You Focused}, + author = {Ariga, Atsunori and Lleras, Alejandro}, + date = {2011-03}, + journaltitle = {Cognition}, + shortjournal = {Cognition}, + volume = {118}, + number = {3}, + pages = {439--443}, + issn = {00100277}, + doi = {10.1016/j.cognition.2010.12.007}, + abstract = {We newly propose that the vigilance decrement occurs because the cognitive control system fails to maintain active the goal of the vigilance task over prolonged periods of time (goal habituation). Further, we hypothesized that momentarily deactivating this goal (via a switch in tasks) would prevent the activation level of the vigilance goal from ever habituating. We asked observers to perform a visual vigilance task while maintaining digits in-memory. When observers retrieved the digits at the end of the vigilance task, their vigilance performance steeply declined over time. However, when observers were asked to sporadically recollect the digits during the vigilance task, the vigilance decrement was averted. Our results present a direct challenge to the pervasive view that vigilance decrements are due to a depletion of attentional resources and provide a tractable mechanism to prevent this insidious phenomenon in everyday life.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/ariga_lleras_2011_brief and rare mental “breaks” keep you focused.pdf} +} + +@article{article, + title = {Toxic Chemicals in Toys and Children's Products: {{Limitations}} of Current Responses and Recommendations for Government and Industry}, + author = {Becker, Monica and Edwards, Sally and Massey, Rachel}, + date = {2010-11}, + journaltitle = {Environmental science \& technology}, + shortjournal = {Environ. Sci. Technol.}, + volume = {44}, + pages = {7986--91}, + doi = {10.1021/es1009407} +} + +@article{asadi2020central, + title = {Central Nervous System Manifestations of {{COVID-19}}: {{A}} Systematic Review}, + author = {Asadi-Pooya, Ali A and Simani, Leila}, + date = {2020}, + journaltitle = {Journal of the Neurological Sciences}, + shortjournal = {J. Neurol. Sci.}, + pages = {116832}, + publisher = {{Elsevier}} +} + +@article{atdjian2005disparities, + title = {Disparities in Mental Health Treatment in {{US}} Racial and Ethnic Minority Groups: {{Implications}} for Psychiatrists}, + author = {Atdjian, Sylvia and Vega, William A}, + date = {2005}, + journaltitle = {Psychiatric Services}, + shortjournal = {Psychiatr. Serv.}, + volume = {56}, + number = {12}, + pages = {1600--1602}, + publisher = {{Am Psychiatric Assoc}} +} + +@article{austenPridePrejudice, + title = {Pride and {{Prejudice}}}, + author = {Austen, Jane}, + pages = {146}, + langid = {english}, + file = {/home/src/Papers/austen_pride and prejudice.pdf} +} + +@online{authorThisWhatHuman2018, + title = {This Is What Human Trafficking Looks Like.}, + author = {Author, Guest}, + date = {2018-06-07T13:35:55-07:00}, + url = {https://www.wearethorn.org/blog/what-human-trafficking-looks-like/}, + urldate = {2018-06-16}, + abstract = {We asked detectives with the Bernalillo County Sheriff’s Office to provide insight on factors that contribute to human trafficking.}, + langid = {american}, + organization = {{Thorn}}, + keywords = {domestic-violence,sex,sex-trafficking,taxonomy,thorn,trafficking,victim,violence}, + file = {/home/cedarprince/Zotero/storage/VTMA76CB/what-human-trafficking-looks-like.html} +} + +@online{AutismSpectrumDisorder, + title = {Autism {{Spectrum Disorder Fact Sheet}} | {{National Institute}} of {{Neurological Disorders}} and {{Stroke}}}, + url = {https://www.ninds.nih.gov/Disorders/Patient-Caregiver-Education/Fact-Sheets/Autism-Spectrum-Disorder-Fact-Sheet}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/LVFIMCZE/Autism-Spectrum-Disorder-Fact-Sheet.html} +} + +@misc{AutismStatisticsFacts, + title = {Autism {{Statistics}} and {{Facts}}}, + publisher = {{Autism Speaks}}, + url = {https://www.autismspeaks.org/autism-statistics}, + urldate = {2020-04-26}, + abstract = {Click here for autism statistics and facts on autism causes, the prevalence of autism in children, associated medical conditions, economic costs and more.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/AG6GP53S/autism-statistics.html} +} + +@online{AverageTimeAwake, + title = {Average Time Awake per Day}, + url = {https://www.statista.com/statistics/326907/awake-time-per-day-uk-by-age-and-gender/}, + urldate = {2020-02-11}, + abstract = {This statistic displays information on the amount of time individuals spent awake per day in the United Kingdom (UK) in 2014, broken down by age group and gender. That year, the average awake time for UK adults aged 16 years and older was 939 minutes or 15 hours and 39 minutes.}, + langid = {english}, + organization = {{Statista}}, + file = {/home/cedarprince/Zotero/storage/KSPNWZ7E/awake-time-per-day-uk-by-age-and-gender.html} +} + +@book{axler2015linear, + title = {Linear Algebra Done Right}, + author = {Axler, Sheldon}, + date = {2015}, + publisher = {{Springer}} +} + +@book{axlerLinearAlgebraDone2015, + title = {Linear {{Algebra Done Right}}}, + author = {Axler, Sheldon}, + date = {2015}, + series = {Undergraduate {{Texts}} in {{Mathematics}}}, + publisher = {{Springer International Publishing}}, + location = {{Cham}}, + doi = {10.1007/978-3-319-11080-6}, + isbn = {978-3-319-11079-0 978-3-319-11080-6}, + langid = {english}, + file = {/home/src/Papers/axler_2015_linear algebra done right.pdf} +} + +@unpublished{baltrusaitisMultimodalMachineLearning2017, + title = {Multimodal {{Machine Learning}}: {{A Survey}} and {{Taxonomy}}}, + shorttitle = {Multimodal {{Machine Learning}}}, + author = {Baltrušaitis, Tadas and Ahuja, Chaitanya and Morency, Louis-Philippe}, + date = {2017-05-25}, + shortjournal = {ArXiv170509406 Cs}, + eprint = {1705.09406}, + eprinttype = {arxiv}, + primaryclass = {cs}, + url = {http://arxiv.org/abs/1705.09406}, + urldate = {2019-04-28}, + abstract = {Our experience of the world is multimodal - we see objects, hear sounds, feel texture, smell odors, and taste flavors. Modality refers to the way in which something happens or is experienced and a research problem is characterized as multimodal when it includes multiple such modalities. In order for Artificial Intelligence to make progress in understanding the world around us, it needs to be able to interpret such multimodal signals together. Multimodal machine learning aims to build models that can process and relate information from multiple modalities. It is a vibrant multi-disciplinary field of increasing importance and with extraordinary potential. Instead of focusing on specific multimodal applications, this paper surveys the recent advances in multimodal machine learning itself and presents them in a common taxonomy. We go beyond the typical early and late fusion categorization and identify broader challenges that are faced by multimodal machine learning, namely: representation, translation, alignment, fusion, and co-learning. This new taxonomy will enable researchers to better understand the state of the field and identify directions for future research.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {carnegie-mellon,complab,multimodal-learning,read}, + file = {/home/src/Offline/Papers/baltrušaitis et al_2017_multimodal machine learning.pdf} +} + +@article{barkerUninsuredAnalysisIncome2013, + title = {The Uninsured: An Analysis by Income and Geography.}, + author = {Barker, Abigail R. and Londeree, Jessica K. and McBride, Timothy D. and Kemper, Leah M. and Mueller, Keith}, + date = {2013}, + journaltitle = {Rural Policy Brief}, + pages = {1--4}, + isbn = {2152-0267}, + issue = {2013 6} +} + +@unpublished{barnettInferringMobilityMeasures2016, + title = {Inferring {{Mobility Measures}} from {{GPS Traces}} with {{Missing Data}}}, + author = {Barnett, Ian and Onnela, Jukka-Pekka}, + date = {2016-06-20}, + shortjournal = {ArXiv160606328 Stat}, + eprint = {1606.06328}, + eprinttype = {arxiv}, + primaryclass = {stat}, + url = {http://arxiv.org/abs/1606.06328}, + urldate = {2019-08-26}, + abstract = {With increasing availability of smartphones with GPS capabilities, large-scale studies relating individual-level mobility patterns to a wide variety of patient-centered outcomes, from mood disorders to surgical recovery, are becoming a reality. Similar past studies have been small in scale and have provided wearable GPS devices to subjects. These devices typically collect mobility traces continuously without significant gaps in the data, and consequently the problem of data missingness has been safely ignored. Leveraging subjects' own smartphones makes it possible to scale up and extend the duration of these types of studies, but at the same time introduces a substantial challenge: to preserve a smartphone's battery, GPS can be active only for a small portion of the time, frequently less than \$10\textbackslash\%\$, leading to a tremendous missing data problem. We introduce a principled statistical approach, based on weighted resampling of the observed data, to impute the missing mobility traces, which we then summarize using different mobility measures. We compare the strengths of our approach to linear interpolation, a popular approach for dealing with missing data, both analytically and through simulation of missingness for empirical data. We conclude that our imputation approach better mirrors human mobility both theoretically and over a sample of GPS mobility traces from 182 individuals in the Geolife data set, where, relative to linear interpolation, imputation resulted in a 10-fold reduction in the error averaged across all mobility features.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {Statistics - Applications,Statistics - Methodology}, + file = {/home/src/Offline/Papers/barnett_onnela_2016_inferring mobility measures from gps traces with missing data.pdf} +} + +@article{basso1987raven, + title = {Raven’s Coloured Progressive Matrices: Normative Values on 305 Adult Normal Controls}, + author = {Basso, Anna and Capitani, Erminio and Laiacona, Marcella and others}, + date = {1987}, + journaltitle = {Funct Neurol}, + volume = {2}, + number = {2}, + pages = {189--194}, + keywords = {\#nosource} +} + +@online{bauerCOVID19CrisisHas2020, + title = {The {{COVID-19 Crisis Has Already Left Too Many Children Hungry}} in {{America}}}, + author = {Bauer, Lauren}, + date = {2020-05-06}, + url = {https://www.hamiltonproject.org/blog/the_covid_19_crisis_has_already_left_too_many_children_hungry_in_america}, + urldate = {2020-11-08}, + abstract = {The Hamilton Project seeks to advance America's promise of opportunity, prosperity, and growth.}, + organization = {{The Hamilton Project}}, + file = {/home/cedarprince/Zotero/storage/WYJXHZE8/the_covid_19_crisis_has_already_left_too_many_children_hungry_in_america.html} +} + +@book{baumeister2007encyclopedia, + title = {Encyclopedia of Social Psychology}, + author = {Baumeister, Roy F and Vohs, Kathleen D}, + date = {2007}, + volume = {1}, + publisher = {{Sage}} +} + +@article{bayley2013challenges, + title = {Challenges in Using Electronic Health Record Data for {{CER}}: Experience of 4 Learning Organizations and Solutions Applied}, + author = {Bayley, K Bruce and Belnap, Tom and Savitz, Lucy and Masica, Andrew L and Shah, Nilay and Fleming, Neil S}, + date = {2013}, + journaltitle = {Medical care}, + shortjournal = {Med. Care}, + pages = {S80--S86}, + publisher = {{JSTOR}} +} + +@article{bechara1999different, + title = {Different Contributions of the Human Amygdala and Ventromedial Prefrontal Cortex to Decision-Making}, + author = {Bechara, Antoine and Damasio, Hanna and Damasio, Antonio R and Lee, Gregory P}, + date = {1999}, + journaltitle = {Journal of neuroscience}, + shortjournal = {J. Neurosci.}, + volume = {19}, + number = {13}, + pages = {5473--5481}, + publisher = {{Soc Neuroscience}} +} + +@article{beck1988inventory, + title = {An Inventory for Measuring Clinical Anxiety: Psychometric Properties.}, + author = {Beck, Aaron T and Epstein, Norman and Brown, Gary and Steer, Robert A}, + date = {1988}, + journaltitle = {Journal of consulting and clinical psychology}, + shortjournal = {J. Consult. Clin. Psychol.}, + volume = {56}, + number = {6}, + pages = {893}, + publisher = {{American Psychological Association}}, + keywords = {\#nosource} +} + +@article{bedecarrats2019all, + title = {All That Glitters Is Not Gold. {{The}} Political Economy of Randomized Evaluations in Development}, + author = {Bédécarrats, Florent and Guérin, Isabelle and Roubaud, François}, + date = {2019}, + journaltitle = {Development and Change}, + shortjournal = {Dev. Change}, + volume = {50}, + number = {3}, + pages = {735--762}, + publisher = {{Wiley Online Library}} +} + +@article{bediAutomatedAnalysisFree2015, + title = {Automated Analysis of Free Speech Predicts Psychosis Onset in High-Risk Youths}, + author = {Bedi, Gillinder and Carrillo, Facundo and Cecchi, Guillermo A and Slezak, Diego Fernández and Sigman, Mariano and Mota, Natália B and Ribeiro, Sidarta and Javitt, Daniel C and Copelli, Mauro and Corcoran, Cheryl M}, + date = {2015-12}, + journaltitle = {npj Schizophrenia}, + shortjournal = {npj Schizophr}, + volume = {1}, + number = {1}, + pages = {15030}, + issn = {2334-265X}, + doi = {10.1038/npjschz.2015.30}, + abstract = {BACKGROUND/OBJECTIVES: Psychiatry lacks the objective clinical tests routinely used in other specializations. Novel computerized methods to characterize complex behaviors such as speech could be used to identify and predict psychiatric illness in individuals. AIMS: In this proof-of-principle study, our aim was to test automated speech analyses combined with Machine Learning to predict later psychosis onset in youths at clinical high-risk (CHR) for psychosis. METHODS: Thirty-four CHR youths (11 females) had baseline interviews and were assessed quarterly for up to 2.5 years; five transitioned to psychosis. Using automated analysis, transcripts of interviews were evaluated for semantic and syntactic features predicting later psychosis onset. Speech features were fed into a convex hull classification algorithm with leave-one-subject-out cross-validation to assess their predictive value for psychosis outcome. The canonical correlation between the speech features and prodromal symptom ratings was computed. RESULTS: Derived speech features included a Latent Semantic Analysis measure of semantic coherence and two syntactic markers of speech complexity: maximum phrase length and use of determiners (e.g., which). These speech features predicted later psychosis development with 100\% accuracy, outperforming classification from clinical interviews. Speech features were significantly correlated with prodromal symptoms. CONCLUSIONS: Findings support the utility of automated speech analysis to measure subtle, clinically relevant mental state changes in emergent psychosis. Recent developments in computer science, including natural language processing, could provide the foundation for future development of objective clinical tests for psychiatry. npj Schizophrenia (2015) 1, Article number: 15030; doi:10.1038/npjschz.2015.30; published online 26 August 2015}, + langid = {english}, + file = {/home/src/Offline/Papers/bedi et al_2015_automated analysis of free speech predicts psychosis onset in high-risk youths.pdf} +} + +@article{benazziBipolarDisorderFocus2007, + title = {Bipolar Disorder--Focus on Bipolar {{II}} Disorder and Mixed Depression}, + author = {Benazzi, Franco}, + date = {2007-03-17}, + journaltitle = {Lancet (London, England)}, + shortjournal = {Lancet}, + volume = {369}, + number = {9565}, + eprint = {17368155}, + eprinttype = {pmid}, + pages = {935--945}, + issn = {1474-547X}, + doi = {10.1016/S0140-6736(07)60453-X}, + abstract = {Bipolar II disorder (recurrent depressive and hypomanic episodes) and related disorders (united in the bipolar spectrum) are understudied, despite a prevalence of about 5\% in the community and about 50\% in depressed outpatients. The apparent increase in prevalence of the bipolar spectrum is related to several changes in diagnostic criteria, including improved probing for history of hypomania (focused more on overactivity than on mood change), lower minimum duration of hypomania, and inclusion of unipolar depressions with bipolar signs (eg, family history of bipolar disorder, mixed depression). Prevalence of mixed depression, a combination of depression and manic or hypomanic symptoms, is high in patients with bipolar disorders. Controlled studies are needed to investigate treatment of mixed depression; antidepressants can worsen manic and hypomanic symptoms, and mood stabilising agents might be necessary.}, + langid = {english}, + keywords = {Adolescent,Adult,Antidepressive Agents,Bipolar Disorder,Child,Cognitive Behavioral Therapy,Depression,Diagnosis; Differential,Diagnostic and Statistical Manual of Mental Disorders,Female,Humans,Lithium Compounds,Male,Mood Disorders,Treatment Outcome} +} + +@article{BenchmarkTools.jl-2016, + title = {Robust Benchmarking in Noisy Environments}, + author = {Chen, Jiahao and Revels, Jarrett}, + date = {2016-08}, + journaltitle = {arXiv e-prints}, + eprint = {1608.04295}, + eprinttype = {arxiv}, + primaryclass = {cs.PF}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2016arXiv160804295C}, + archiveprefix = {arXiv}, + eid = {arXiv:1608.04295}, + keywords = {68N30,B.8.1,Computer Science - Performance,D.2.5} +} + +@article{benedettiMorningSunlightReduces2001, + title = {Morning Sunlight Reduces Length of Hospitalization in Bipolar Depression}, + author = {Benedetti, Francesco and Colombo, Cristina and Barbini, Barbara and Campori, Euridice and Smeraldi, Enrico}, + date = {2001-02}, + journaltitle = {Journal of Affective Disorders}, + shortjournal = {Journal of Affective Disorders}, + volume = {62}, + number = {3}, + pages = {221--223}, + issn = {01650327}, + doi = {10.1016/S0165-0327(00)00149-X}, + abstract = {Background: Bright artificial light improves non-seasonal depression. Preliminary observations suggest that sunlight could share this effect. Methods: Length of hospitalization was recorded for a sample of 415 unipolar and 187 bipolar depressed inpatients, assigned to rooms with eastern (E) or western (W) windows. Results: Bipolar inpatients in E rooms (exposed to direct sunlight in the morning) had a mean 3.67-day shorter hospital stay than patients in W rooms. No effect was found in unipolar inpatients. Conclusions: Natural sunlight can be an underestimated and uncontrolled light therapy for bipolar depression. Limitations: This is a naturalistic retrospective observation, which needs to be confirmed by prospective studies. © 2001 Elsevier Science B.V. All rights reserved.}, + langid = {english}, + file = {/home/src/Offline/Papers/benedetti et al_2001_morning sunlight reduces length of hospitalization in bipolar depression.pdf} +} + +@article{benhabilesAntibacterialActivityChitin2012, + title = {Antibacterial Activity of Chitin, Chitosan and Its Oligomers Prepared from Shrimp Shell Waste}, + author = {Benhabiles, M.S. and Salah, R. and Lounici, H. and Drouiche, N. and Goosen, M.F.A. and Mameri, N.}, + year = {2012/10/1/October 2012///}, + journaltitle = {Food Hydrocolloids}, + shortjournal = {Food Hydrocolloids}, + volume = {29}, + pages = {48--56}, + issn = {0268-005X}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0268005X12000446&site=eds-live&scope=site}, + abstract = {The antimicrobial activities of chito-oligosaccharides against four Gram-positive and seven Gram-negative bacteria were compared to chitosan and chitin with an emphasis on the effects of biopolymer molecular weight (Mv) and degree of deacetylation (DD). Chitin was isolated from shrimp (Parapenaeus longirostris) shell waste by sequential chemical treatments. Chitosan and its oligomers N-acetyl chito-oligosaccharides and chito-oligosaccharides were prepared by deacetylation and chemical hydrolysis, respectively. Chitin exhibited a bacteriostatic effect on Gram-negative bacteria, Escherichia coli ATCC 25922, Vibrio cholerae, Shigella dysenteriae, and Bacteroides fragilis. Chitosan exhibited a bacteriostatic effect on all bacteria tested, except Salmonella typhimurium. The oligomers exhibited a bactericidal effect on all bacteria tested.}, + keywords = {\#nosource} +} + +@article{bennettFunctionalOutcomeIntracranial2017a, + title = {Functional {{Outcome After Intracranial Pressure Monitoring}} for {{Children With Severe Traumatic Brain Injury}}}, + author = {Bennett, Tellen D. and DeWitt, Peter E. and Greene, Tom H. and Srivastava, Rajendu and Riva-Cambrin, Jay and Nance, Michael L. and Bratton, Susan L. and Runyan, Desmond K. and Dean, J. Michael and Keenan, Heather T.}, + date = {2017-10-01}, + journaltitle = {JAMA Pediatrics}, + shortjournal = {JAMA Pediatr}, + volume = {171}, + number = {10}, + pages = {965}, + issn = {2168-6203}, + doi = {10.1001/jamapediatrics.2017.2127}, + abstract = {OBJECTIVE To test the hypothesis that ICP monitoring is associated with improved functional survival of children with severe TBI. DESIGN, SETTING, AND PARTICIPANTS A propensity-weighted effectiveness analysis was conducted using 2 linked national databases with data from 30 US children’s hospitals from January 1, 2007, to December 31, 2012, on 3084 children with severe TBI. Clinical events including neurosurgical procedures were identified using validated computable phenotypes. Data analysis was conducted from September 1, 2016, to March 1, 2017. EXPOSURE Placement of an ICP monitor. Editorial page 942 Author Audio Interview Journal Club Slides and Supplemental content CME Quiz at jamanetwork.com/learning and CME Questions page 1023 MAIN OUTCOMES AND MEASURES A composite of hospital mortality, discharge to hospice, or survival with placement of new tracheostomy and gastrostomy tubes. RESULTS Of the 3084 children in the study (1128 girls and 1956 boys; mean [SD] age, 7.03 [5.44] years), 1002 (32.4\%) underwent ICP monitoring, with substantial hospital variation (6\% to 50\% by hospital). Overall, 484 children (15.7\%) experienced the primary composite outcome. A propensity approach using matching weights generated good covariate balance between those who did and those who did not undergo ICP monitoring. Using a propensity-weighted logistic regression model clustered by hospital, no statistically significant difference was found in functional survival between monitored and unmonitored patients (odds ratio of poor outcome among those who underwent ICP monitoring, 1.31; 95\% CI, 0.99-1.74). In a prespecified secondary analysis, no difference in mortality was found (odds ratio, 1.16; 95\% CI, 0.89-1.50). Prespecified subgroup analyses of children younger and older than 2 years of age and among those with unintentional and inflicted (intentional) injuries also showed no difference in outcome with ICP monitoring. CONCLUSIONS AND RELEVANCE With the use of linked national data and validated computable phenotypes, no evidence was found of a benefit from ICP monitoring on functional survival of children with severe TBI. Intracranial pressure monitoring is a widely but inconsistently used technology with incompletely demonstrated effectiveness. A large prospective cohort study or randomized trial is needed.}, + langid = {english}, + file = {/home/src/Papers/bennett et al_2017_functional outcome after intracranial pressure monitoring for children with.pdf} +} + +@article{benton1967problems, + title = {Problems of Test Construction in the Field of Aphasia.}, + author = {Benton, Arthur L}, + date = {1967}, + journaltitle = {Cortex: A Journal Devoted to the Study of the Nervous System and Behavior}, + shortjournal = {Cortex J. Devoted Study Nerv. Syst. Behav.}, + publisher = {{Masson Italia}}, + keywords = {\#nosource} +} + +@article{benton1989multilingual, + title = {Multilingual Aphasia Examination. Iowa City, {{IA}}: {{AJA}} Associates}, + author = {Benton, AL and d Hamsher, K and Sivan, A}, + date = {1989}, + journaltitle = {NEUROPSYCHOLOGY, BLOCKING, SCHIZOPHRENIA}, + shortjournal = {Neuropsychol. BLOCKING Schizophr.}, + volume = {59}, + keywords = {\#nosource} +} + +@online{benzBulletJournalGTD2016, + title = {Bullet {{Journal}} + {{GTD}} for {{Maximum Productivity}}}, + author = {Benz, Kara}, + date = {2016-04-22T11:00:38+00:00}, + url = {https://www.bohoberry.com/bullet-journal-gtd/}, + urldate = {2020-03-19}, + abstract = {There are many ways to implement GTD (digitally, paper-based systems, etc.) I decided to go with one that felt the most natural to me - putting pen to paper}, + langid = {american}, + organization = {{Boho Berry}}, + file = {/home/cedarprince/Zotero/storage/4N89IANR/bullet-journal-gtd.html} +} + +@article{berwickTripleAimCare2008, + title = {The {{Triple Aim}}: {{Care}}, {{Health}}, {{And Cost}}}, + author = {Berwick, Donald and Nolan, Thomas and Whittington, John}, + date = {2008}, + journaltitle = {Health Affairs}, + shortjournal = {Health Aff. (Millwood)}, + volume = {27}, + number = {3}, + file = {/home/src/Offline/Papers/berwick et al_2008_the triple aim.pdf} +} + +@article{bezanson2017julia, + title = {Julia: {{A}} Fresh Approach to Numerical Computing}, + author = {Bezanson, Jeff and Edelman, Alan and Karpinski, Stefan and Shah, Viral B}, + date = {2017}, + journaltitle = {SIAM review}, + shortjournal = {SIAM Rev.}, + volume = {59}, + number = {1}, + pages = {65--98}, + publisher = {{SIAM}}, + url = {https://doi.org/10.1137/141000671} +} + +@article{bi2020epidemiology, + title = {Epidemiology and Transmission of {{COVID-19}} in 391 Cases and 1286 of Their Close Contacts in {{Shenzhen}}, {{China}}: A Retrospective Cohort Study}, + author = {Bi, Qifang and Wu, Yongsheng and Mei, Shujiang and Ye, Chenfei and Zou, Xuan and Zhang, Zhen and Liu, Xiaojian and Wei, Lan and Truelove, Shaun A and Zhang, Tong and others}, + date = {2020}, + journaltitle = {The Lancet Infectious Diseases}, + shortjournal = {Lancet Infect. Dis.}, + publisher = {{Elsevier}} +} + +@unpublished{bishaySchiNetAutomaticEstimation2018, + title = {{{SchiNet}}: {{Automatic Estimation}} of {{Symptoms}} of {{Schizophrenia}} from {{Facial Behaviour Analysis}}}, + shorttitle = {{{SchiNet}}}, + author = {Bishay, Mina and Palasek, Petar and Priebe, Stefan and Patras, Ioannis}, + date = {2018-08-07}, + shortjournal = {ArXiv180802531 Cs}, + eprint = {1808.02531}, + eprinttype = {arxiv}, + primaryclass = {cs}, + url = {http://arxiv.org/abs/1808.02531}, + urldate = {2019-04-28}, + abstract = {Patients with schizophrenia often display impairments in the expression of emotion and speech and those are observed in their facial behaviour. Automatic analysis of patients’ facial expressions that is aimed at estimating symptoms of schizophrenia has received attention recently. However, the datasets that are typically used for training and evaluating the developed methods, contain only a small number of patients (4-34) and are recorded while the subjects were performing controlled tasks such as listening to life vignettes, or answering emotional questions. In this paper, we use videos of professional-patient interviews, in which symptoms were assessed in a standardised way as they should/may be assessed in practice, and which were recorded in realistic conditions (i.e. varying illumination levels and camera viewpoints) at the patients’ homes or at mental health services. We automatically analyse the facial behaviour of 91 out-patients – this is almost 3 times the number of patients in other studies – and propose SchiNet, a novel neural network architecture that estimates expression-related symptoms in two different assessment interviews. We evaluate the proposed SchiNet for patient-independent prediction of symptoms of schizophrenia. Experimental results show that some automatically detected facial expressions are significantly correlated to symptoms of schizophrenia, and that the proposed network for estimating symptom severity delivers promising results.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {Computer Science - Computer Vision and Pattern Recognition,schizophrenia}, + file = {/home/src/Offline/Papers/bishay et al_2018_schinet.pdf} +} + +@article{biswalFunctionalConnectivityMotor1995, + title = {Functional Connectivity in the Motor Cortex of Resting Human Brain Using Echo-Planar {{MRI}}}, + author = {Biswal, B. and Yetkin, F. Z. and Haughton, V. M. and Hyde, J. S.}, + date = {1995-10}, + journaltitle = {Magnetic Resonance in Medicine}, + shortjournal = {Magn Reson Med}, + volume = {34}, + number = {4}, + eprint = {8524021}, + eprinttype = {pmid}, + pages = {537--541}, + issn = {0740-3194}, + doi = {10.1002/mrm.1910340409}, + abstract = {An MRI time course of 512 echo-planar images (EPI) in resting human brain obtained every 250 ms reveals fluctuations in signal intensity in each pixel that have a physiologic origin. Regions of the sensorimotor cortex that were activated secondary to hand movement were identified using functional MRI methodology (FMRI). Time courses of low frequency ({$<$} 0.1 Hz) fluctuations in resting brain were observed to have a high degree of temporal correlation (P {$<$} 10(-3)) within these regions and also with time courses in several other regions that can be associated with motor function. It is concluded that correlation of low frequency fluctuations, which may arise from fluctuations in blood oxygenation or flow, is a manifestation of functional connectivity of the brain.}, + langid = {english}, + keywords = {Acoustic Stimulation,Adult,Brain,Cerebrovascular Circulation,Echo-Planar Imaging,Electroencephalography,Female,Fingers,Hand,Humans,Magnetic Resonance Imaging,Male,Motor Cortex,Motor Skills,Movement,Neurons,Oxygen,Photic Stimulation,Psychomotor Performance,Rest,Somatosensory Cortex} +} + +@article{bjork1994memory, + title = {Memory and Metamemory Considerations in The}, + author = {Bjork, Robert A}, + date = {1994}, + journaltitle = {Metacognition: Knowing about knowing}, + shortjournal = {Metacognition Knowing Knowing}, + volume = {185} +} + +@article{bjork2011making, + title = {Making Things Hard on Yourself, but in a Good Way: {{Creating}} Desirable Difficulties to Enhance Learning}, + author = {Bjork, Elizabeth L and Bjork, Robert A and others}, + date = {2011}, + journaltitle = {Psychology and the real world: Essays illustrating fundamental contributions to society}, + shortjournal = {Psychol. Real World Essays Illus. Fundam. Contrib. Soc.}, + volume = {2}, + number = {59-68}, + file = {/Users/jzelko3/Knowledgebase/Papers/bjork et al_2011_making things hard on yourself, but in a good way.pdf} +} + +@article{blair1989predicting, + title = {Predicting Premorbid {{IQ}}: A Revision of the National Adult Reading Test}, + author = {Blair, Jennifer R and Spreen, Otfried}, + date = {1989}, + journaltitle = {The Clinical Neuropsychologist}, + shortjournal = {Clin. Neuropsychol.}, + volume = {3}, + number = {2}, + pages = {129--136}, + publisher = {{Taylor \& Francis}}, + keywords = {\#nosource} +} + +@article{blane2002evolution, + title = {The Evolution of Public Health Policy}, + author = {Blane, David and Brunner, Eric and Wilkinson, Richard}, + date = {2002}, + journaltitle = {Health and social organization: towards a health policy for the 21st century}, + shortjournal = {Health Soc. Organ. Health Policy 21st Century}, + pages = {1}, + publisher = {{Routledge}} +} + +@article{blessed1968association, + title = {The Association between Quantitative Measures of Dementia and of Senile Change in the Cerebral Grey Matter of Elderly Subjects}, + author = {Blessed, Garry and Tomlinson, Bernard E and Roth, Martin}, + date = {1968}, + journaltitle = {The British Journal of Psychiatry}, + shortjournal = {Br. J. Psychiatry}, + volume = {114}, + number = {512}, + pages = {797--811}, + publisher = {{Cambridge University Press}}, + keywords = {\#nosource} +} + +@online{BluetoothBasicsLearn, + title = {Bluetooth {{Basics}} - Learn.Sparkfun.Com}, + url = {https://learn.sparkfun.com/tutorials/bluetooth-basics/common-versions}, + urldate = {2020-04-27}, + file = {/home/cedarprince/Zotero/storage/7RMNHD88/common-versions.html} +} + +@misc{BMED3610Handbook, + title = {{{BMED3610 Handbook}}}, + file = {/home/src/Offline/Papers/bmed3610 handbook.pdf} +} + +@online{bogumilkaminskiActivatingProjectEnvironment2020, + title = {Activating Project Environment in {{Julia REPL}} Automatically}, + author = {{Bogumił Kamiński}}, + date = {2020-05-10}, + url = {https://bkamins.github.io/julialang/2020/05/10/julia-project-environments.html}, + urldate = {2020-06-18} +} + +@article{bonneh2001motion, + title = {Motion-Induced Blindness in Normal Observers}, + author = {Bonneh, Yoram S and Cooperman, Alexander and Sagi, Dov}, + date = {2001}, + journaltitle = {Nature}, + volume = {411}, + number = {6839}, + pages = {798--801}, + publisher = {{Nature Publishing Group}} +} + +@inproceedings{borazioBenchmarkedSleepDetection2014, + title = {Towards {{Benchmarked Sleep Detection}} with {{Wrist-Worn Sensing Units}}}, + booktitle = {2014 {{IEEE International Conference}} on {{Healthcare Informatics}}}, + author = {Borazio, Marko and Berlin, Eugen and Kucukyildiz, Nagihan and Scholl, Philipp and Laerhoven, Kristof Van}, + date = {2014-09}, + pages = {125--134}, + publisher = {{IEEE}}, + location = {{Verona, Italy}}, + doi = {10.1109/ICHI.2014.24}, + abstract = {The monitoring of sleep by quantifying sleeping time and quality is pivotal in many preventive health care scenarios. A substantial amount of wearable sensing products have been introduced to the market for just this reason, detecting whether the user is either sleeping or awake. Assessing these devices for their accuracy in estimating sleep is a daunting task, as their hardware design tends to be different and many are closed-source systems that have not been clinically tested. In this paper, we present a challenging benchmark dataset from an open source wrist-worn data logger that contains relatively high-frequent (100Hz) 3D inertial data from 42 sleep lab patients, along with their data from clinical polysomnography. We analyse this dataset with two traditional approaches for detecting sleep and wake states and propose a new algorithm specifically for 3D acceleration data, which operates on a principle of Estimation of Stationary Sleep-segments (ESS). Results show that all three methods generally over-estimate for sleep, with our method performing slightly better (almost 79\% overall median accuracy) than the traditional activity count-based methods.}, + eventtitle = {2014 {{IEEE International Conference}} on {{Healthcare Informatics}} ({{ICHI}})}, + isbn = {978-1-4799-5701-9}, + langid = {english}, + file = {/home/src/Offline/Papers/borazio et al_2014_towards benchmarked sleep detection with wrist-worn sensing units.pdf} +} + +@article{bornsteinArtificialIntelligencePermanently2016, + title = {Is {{Artificial Intelligence Permanently Inscrutable}}?}, + author = {Bornstein, Aaron}, + date = {2016-09-01}, + journaltitle = {Nautilus}, + url = {http://nautil.us/issue/40/learning/is-artificial-intelligence-permanently-inscrutable?}, + urldate = {2018-02-04}, + entrysubtype = {newspaper}, + keywords = {\#nosource} +} + +@article{borzekowski2010ana, + title = {E-{{Ana}} and e-{{Mia}}: {{A}} Content Analysis of pro–Eating Disorder Web Sites}, + author = {Borzekowski, Dina LG and Schenk, Summer and Wilson, Jenny L and Peebles, Rebecka}, + date = {2010}, + journaltitle = {American journal of public health}, + shortjournal = {Am. J. Public Health}, + volume = {100}, + number = {8}, + pages = {1526--1534}, + publisher = {{American Public Health Association}} +} + +@article{bosma1997low, + title = {Low Job Control and Risk of Coronary Heart Disease in {{Whitehall II}} (Prospective Cohort) Study}, + author = {Bosma, Hans and Marmot, Michael G and Hemingway, Harry and Nicholson, Amanda C and Brunner, Eric and Stansfeld, Stephen A}, + date = {1997}, + journaltitle = {Bmj}, + volume = {314}, + number = {7080}, + pages = {558}, + publisher = {{British Medical Journal Publishing Group}} +} + +@book{boucseinElectrodermalActivity2012, + title = {Electrodermal {{Activity}}}, + author = {Boucsein, Wolfram}, + date = {2012}, + publisher = {{Springer US}}, + location = {{Boston, MA}}, + doi = {10.1007/978-1-4614-1126-0}, + isbn = {978-1-4614-1125-3 978-1-4614-1126-0}, + langid = {english}, + file = {/home/src/Offline/Papers/boucsein_2012_electrodermal activity.pdf} +} + +@article{bourke2005effect, + title = {Effect of Template Complexity on Visual Search and Dual-Task Performance}, + author = {Bourke, Patrick A and Duncan, John}, + date = {2005}, + journaltitle = {Psychological science}, + shortjournal = {Psychol. Sci.}, + volume = {16}, + number = {3}, + pages = {208--213}, + publisher = {{SAGE Publications Sage CA: Los Angeles, CA}} +} + +@article{boutainCaringVulnerablePerspectives2021, + title = {Caring for the Vulnerable: {{Perspectives}} in Nursing Theory, Practice, and Research}, + author = {Boutain, D.}, + date = {2021}, + journaltitle = {Social justice in nursing: A review of the literature. 5th ed. Sunbury, MA: Jones and Bartlett Publishers}, + shortjournal = {Soc. Justice Nurs. Rev. Lit. 5th Ed Sunbury MA Jones Bartlett Publ.}, + pages = {57--73} +} + +@book{bradburyPrinciplesAnimatlCommunication2011, + title = {Principles of {{Animatl Communication}}}, + shorttitle = {Second {{Edition Companion Website}}}, + author = {Bradbury, J. W. and Vehrencamp, S. L.}, + date = {2011}, + edition = {2}, + publisher = {{Sinauer}}, + url = {http://sites.sinauer.com/animalcommunication2e} +} + +@article{braddock2017state, + title = {The State of the States in Intellectual and Developmental Disabilities, 2017 Washington}, + author = {Braddock, DL and Hemp, R and Tanis, ES and Wu, J and Haffer, L}, + date = {2017}, + journaltitle = {DC: American Association on Intellectual and Developmental Disabilities}, + shortjournal = {DC Am. Assoc. Intellect. Dev. Disabil.} +} + +@article{bradley2007emotion, + title = {Emotion and Motivation.}, + author = {Bradley, Margaret M and Lang, Peter J}, + date = {2007}, + publisher = {{Cambridge University Press}} +} + +@article{bradley2009natural, + title = {Natural Selective Attention: {{Orienting}} and Emotion}, + author = {Bradley, Margaret M}, + date = {2009}, + journaltitle = {Psychophysiology}, + volume = {46}, + number = {1}, + pages = {1--11}, + publisher = {{Wiley Online Library}} +} + +@article{braithwaiteAutomatedPartlyAutomated2020, + title = {Automated and Partly Automated Contact Tracing: A Systematic Review to Inform the Control of {{COVID-19}}}, + shorttitle = {Automated and Partly Automated Contact Tracing}, + author = {Braithwaite, Isobel and Callender, Thomas and Bullock, Miriam and Aldridge, Robert W}, + date = {2020-11}, + journaltitle = {The Lancet Digital Health}, + shortjournal = {The Lancet Digital Health}, + volume = {2}, + number = {11}, + pages = {e607-e621}, + issn = {25897500}, + doi = {10.1016/S2589-7500(20)30184-9}, + langid = {english}, + file = {/home/src/Papers/braithwaite et al_2020_automated and partly automated contact tracing.pdf} +} + +@article{brayneCohortProfileMedical2006, + title = {Cohort {{Profile}}: {{The Medical Research Council Cognitive Function}} and {{Ageing Study}} ({{CFAS}})†}, + shorttitle = {Cohort {{Profile}}}, + author = {Brayne, Carol and McCracken, Cherie and Matthews, Fiona E}, + date = {2006-10-01}, + journaltitle = {International Journal of Epidemiology}, + shortjournal = {Int. J. Epidemiol.}, + volume = {35}, + number = {5}, + pages = {1140--1145}, + issn = {1464-3685, 0300-5771}, + doi = {10.1093/ije/dyl199}, + langid = {english}, + file = {/home/src/Offline/Papers/brayne et al_2006_cohort profile.pdf} +} + +@article{breenTranslationalHealthDisparities2019, + title = {Translational {{Health Disparities Research}} in a {{Data-Rich World}}}, + author = {Breen, Nancy and Berrigan, David and Jackson, James S. and Wong, David W.S. and Wood, Frederick B. and Denny, Joshua C. and Zhang, Xinzhi and Bourne, Philip E.}, + date = {2019-11-01}, + journaltitle = {Health Equity}, + shortjournal = {Health Equity}, + volume = {3}, + number = {1}, + pages = {588--600}, + issn = {2473-1242}, + doi = {10.1089/heq.2019.0042}, + abstract = {Background: Despite decades of research and interventions, significant health disparities persist. Seventeen years is the estimated time to translate scientific discoveries into public health action. This Narrative Review argues that the translation process could be accelerated if representative data were gathered and used in more innovative and efficient ways. Methods: The National Institute on Minority Health and Health Disparities led a multiyear visioning process to identify research opportunities designed to frame the next decade of research and actions to improve minority health and reduce health disparities. ‘‘Big data’’ was identified as a research opportunity and experts collaborated on a systematic vision of how to use big data both to improve the granularity of information for place-based study and to efficiently translate health disparities research into improved population health. This Narrative Review is the result of that collaboration. Results: Big data could enhance the process of translating scientific findings into reduced health disparities by contributing information at fine spatial and temporal scales suited to interventions. In addition, big data could fill pressing needs for health care system, genomic, and social determinant data to understand mechanisms. Finally, big data could lead to appropriately personalized health care for demographic groups. Rich new resources, including social media, electronic health records, sensor information from digital devices, and crowd-sourced and citizen-collected data, have the potential to complement more traditional data from health surveys, administrative data, and investigator-initiated registries or cohorts. This Narrative Review argues for a renewed focus on translational research cycles to accomplish this continual assessment. Conclusion: The promise of big data extends from etiology research to the evaluation of large-scale interventions and offers the opportunity to accelerate translation of health disparities studies. This data-rich world for health disparities research, however, will require continual assessment for efficacy, ethical rigor, and potential algorithmic or system bias.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Breen et al_2019_Translational Health Disparities Research in a Data-Rich World.pdf} +} + +@book{brett2009reconstructing, + title = {Reconstructing Development Theory: {{International}} Inequality, Institutional Reform and Social Emancipation}, + author = {Brett, Edwin Allan}, + date = {2009}, + publisher = {{Macmillan International Higher Education}} +} + +@article{brotsky2007inside, + title = {Inside the “pro-Ana” Community: {{A}} Covert Online Participant Observation}, + author = {Brotsky, Sarah R and Giles, David}, + date = {2007}, + journaltitle = {Eating disorders}, + shortjournal = {Eat. Disord.}, + volume = {15}, + number = {2}, + pages = {93--109}, + publisher = {{Taylor \& Francis}} +} + +@book{brown1994introduction, + title = {An Introduction to Neuroendocrinology}, + author = {Brown, Richard and Brown, Richard Eric and Brown, Richard E}, + date = {1994}, + publisher = {{Cambridge University Press}} +} + +@article{brownFundamentalTheoremExponential1961, + title = {The {{Fundamental Theorem}} of {{Exponential Smoothing}}}, + author = {Brown, Robert G. and Meyer, Richard F. and D'Esopo, D. A.}, + date = {1961}, + journaltitle = {Operations Research}, + shortjournal = {Oper. Res.}, + volume = {9}, + number = {5}, + eprint = {166814}, + eprinttype = {jstor}, + pages = {673--687}, + langid = {english}, + file = {/home/src/Offline/Papers/brown et al_1961_the fundamental theorem of exponential smoothing.pdf} +} + +@misc{brownLearnPlover2021, + title = {Learn {{Plover}}!}, + author = {Brown, Zach}, + date = {2021}, + file = {/home/src/Papers/brown_2021_learn plover.pdf} +} + +@book{brownMakeItStick2014, + title = {Make It Stick: The Science of Successful Learning}, + shorttitle = {Make It Stick}, + author = {Brown, Peter C.}, + date = {2014}, + publisher = {{The Belknap Press of Harvard University Press}}, + location = {{Cambridge, Massachusetts}}, + isbn = {978-0-674-72901-8}, + langid = {english}, + pagetotal = {313}, + keywords = {Cognition,Learning,Research,Study skills}, + file = {/home/src/Papers/brown_2014_make it stick.pdf} +} + +@video{BulletJournalBasicsa, + title = {Bullet {{Journal Basics}} | {{My Daily Layout}} \& {{Upgraded Rapid Logging}} in a {{BuJo}}}, + url = {https://www.youtube.com/watch?v=x_Xq4c9AdOk}, + urldate = {2020-03-19}, + abstract = {Setting your first bullet journal can be a pretty confusing process! This series of bullet journal basics helps you create a useful daily layout, learn "upgraded" rapid logging, and how to connect weekly goals and objectives to the daily log. It's perfect for setting up a new bullet journal! Keep an eye on my channel and this playlist for new videos in the bullet journal basics series! I will also cover daily bullet journal spreads, monthly bujo layouts, and more! My name is Matt Ragland and I make videos about using a minimalist bullet journal to focus on what matters most to you. I’ll show you how to use concepts like 10 Blocks, Time Tracking Grids, and Project Timelines to quickly see what needs to be done and when. You can look for these videos every week, so please hit subscribe to stay in the loop for each new show! ================================================== Learn more about the 10 Blocks here: https://youtu.be/jckqcRTntVg and Time Tracking here: https://youtu.be/kgzx047m-gY Download all of my Bullet Journal productivity resources, including the 10 Block Method, Time Tracking Grids, and Monthly Plan at http://bulletjournalguy.com. You'll also be able to enter the 5 Day Time Track Challenge to see where your time is spent each day. *Bullet Journal Supplies* https://www.amazon.com/shop/mattragland *Notebook from Baron Fig* Get \$10 off your first Baron Fig order with my code: http://baronfig.refr.cc/mcragland If you've ordered from Baron Fig before, please use my code to purchase additional products: https://www.baronfig.com/?ref=mattrag... ================================================== You can find me in other places too, like... Website: http://mattragland.com Medium: https://medium.com/@mattragland/ Instagram http://instagram.com/bulletjournalguy Twitter http://twitter.com/mattragland} +} + +@video{BulletJournalBasicsb, + title = {Bullet {{Journal Basics}} || {{The Weekly Preview}} \& {{Review}} || 4 {{Simple Questions}} for {{Staying Focused}}}, + url = {https://www.youtube.com/watch?v=N7sGquo8ejI}, + urldate = {2020-03-19}, + abstract = {The weekly preview and review is a foundational practice to the bullet journal basics method. By taking just 15-30 minutes each week and asking 4 simple questions, you can greatly increase your awareness and clarity for the week ahead. People often overlook this practice in their bullet journal, but I believe that's a mistake. A consistent preview and review practice helps you see where you did well, what you struggled with, and how to improve in the week ahead. This is the 4th video in my bullet journal basics series, watch the others below: Opening pages \& index: https://youtu.be/eaef3raM5n8 Daily spread \& rapid logging: https://youtu.be/x\_Xq4c9AdOk Monthly layout \& minimalist trackers: https://youtu.be/pp\_yXeYeaHs My name is Matt Ragland and I make videos about using a minimalist bullet journal to focus on what matters most to you. I’ll show you how to use concepts like 10 Blocks, Time Tracking Grids, and Project Timelines to quickly see what needs to be done and when. You can look for these videos every week, so please hit subscribe to stay in the loop for each new show! ================================================== Learn more about the 10 Blocks here: https://youtu.be/jckqcRTntVg and Time Tracking here: https://youtu.be/kgzx047m-gY Download all of my Bullet Journal productivity resources, including the 10 Block Method, Time Tracking Grids, and Monthly Plan at http://bulletjournalguy.com. You'll also be able to enter the 5 Day Time Track Challenge to see where your time is spent each day. *Bullet Journal Supplies* https://www.amazon.com/shop/mattragland *Notebook from Baron Fig* Get \$10 off your first Baron Fig order with my code: http://baronfig.refr.cc/mcragland If you've ordered from Baron Fig before, please use my code to purchase additional products: https://www.baronfig.com/?ref=mattrag... ================================================== You can find me in other places too, like... Website: http://mattragland.com Medium: https://medium.com/@mattragland/ Instagram http://instagram.com/bulletjournalguy Twitter http://twitter.com/mattragland Music by Lauren Duski: https://www.youtube.com/channel/UCtlI...} +} + +@article{buolamwiniGenderShadesIntersectional, + title = {Gender {{Shades}}: {{Intersectional Accuracy Disparities}} in {{Commercial Gender Classification}}}, + author = {Buolamwini, Joy and Gebru, Timnit}, + pages = {15}, + abstract = {Recent studies demonstrate that machine learning algorithms can discriminate based on classes like race and gender. In this work, we present an approach to evaluate bias present in automated facial analysis algorithms and datasets with respect to phenotypic subgroups. Using the dermatologist approved Fitzpatrick Skin Type classification system, we characterize the gender and skin type distribution of two facial analysis benchmarks, IJB-A and Adience. We find that these datasets are overwhelmingly composed of lighter-skinned subjects (79.6\% for IJB-A and 86.2\% for Adience) and introduce a new facial analysis dataset which is balanced by gender and skin type. We evaluate 3 commercial gender classification systems using our dataset and show that darker-skinned females are the most misclassified group (with error rates of up to 34.7\%). The maximum error rate for lighter-skinned males is 0.8\%. The substantial disparities in the accuracy of classifying darker females, lighter females, darker males, and lighter males in gender classification systems require urgent attention if commercial companies are to build genuinely fair, transparent and accountable facial analysis algorithms.}, + langid = {english}, + file = {/home/src/Offline/Papers/buolamwini_gebru_gender shades.pdf} +} + +@article{burgessWhyNHSCovid192020, + title = {Why the {{NHS Covid-19}} Contact Tracing App Failed}, + author = {Burgess, Matt}, + date = {2020-06-19}, + journaltitle = {Wired UK}, + issn = {1357-0978}, + url = {https://www.wired.co.uk/article/nhs-tracing-app-scrapped-apple-google-uk}, + urldate = {2020-11-09}, + abstract = {Test, track and trace – just not with the NHS app}, + entrysubtype = {magazine}, + langid = {british}, + keywords = {Security,Surveillance}, + file = {/home/cedarprince/Zotero/storage/MH8UQMI3/nhs-tracing-app-scrapped-apple-google-uk.html} +} + +@incollection{burrellCoronaviruses2017, + title = {Coronaviruses}, + booktitle = {Fenner and {{White}}'s {{Medical Virology}}}, + author = {Burrell, Christopher J. and Howard, Colin R. and Murphy, Frederick A.}, + date = {2017}, + pages = {437--446}, + publisher = {{Elsevier}}, + doi = {10.1016/B978-0-12-375156-0.00031-X}, + isbn = {978-0-12-375156-0}, + langid = {english}, + file = {/home/src/Offline/Papers/burrell et al_2017_coronaviruses.pdf} +} + +@article{burzoSensingAffectiveResponse2019, + title = {Sensing {{Affective Response}} to {{Visual Narratives}}}, + author = {Burzo, Mihai and Perez-Rosas, Veronica and McDuff, Daniel and Morency, Louis-Philippe and Narvaez, Alexis and Mihalcea, Rada}, + date = {2019-05}, + journaltitle = {IEEE Computational Intelligence Magazine}, + shortjournal = {IEEE Comput. Intell. Mag.}, + volume = {14}, + number = {2}, + pages = {54--66}, + issn = {1556-603X, 1556-6048}, + doi = {10.1109/MCI.2019.2901086}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/6KN5ZMK4/Burzo et al. - 2019 - Sensing Affective Response to Visual Narratives.pdf} +} + +@article{buschke1984cued, + title = {Cued Recall in Amnesia}, + author = {Buschke, Herman}, + date = {1984}, + journaltitle = {Journal of Clinical and Experimental Neuropsychology}, + shortjournal = {J. Clin. Exp. Neuropsychol.}, + volume = {6}, + number = {4}, + pages = {433--440}, + publisher = {{Taylor \& Francis}}, + keywords = {\#nosource} +} + +@article{bush1945we, + title = {As We May Think}, + author = {Bush, Vannevar and others}, + date = {1945}, + journaltitle = {The atlantic monthly}, + shortjournal = {Atl. Mon.}, + volume = {176}, + number = {1}, + pages = {101--108} +} + +@article{butler2008feedback, + title = {Feedback Enhances the Positive Effects and Reduces the Negative Effects of Multiple-Choice Testing}, + author = {Butler, Andrew C and Roediger, Henry L}, + date = {2008}, + journaltitle = {Memory \& cognition}, + shortjournal = {Mem. Cognit.}, + volume = {36}, + number = {3}, + pages = {604--616}, + publisher = {{Springer}} +} + +@book{c.northcoteparkinsonParkinsonLawOther1957, + title = {Parkinson’s {{Law}} and {{Other Studies}} in {{Administration}}}, + author = {{C. Northcote Parkinson}}, + date = {1957}, + publisher = {{The Riverside Press}}, + file = {/home/src/Offline/Papers/c. northcote parkinson_1957_parkinson’s law and other studies in administration.pdf} +} + +@article{caffarra2002rey, + title = {Rey-{{Osterrieth}} Complex Figure: Normative Values in an {{Italian}} Population Sample}, + author = {Caffarra, P and Vezzadini, G and Dieci, F and Zonato, F and Venneri, A}, + date = {2002}, + journaltitle = {Neurological Sciences}, + shortjournal = {Neurol. Sci.}, + volume = {22}, + number = {6}, + pages = {443--447}, + publisher = {{Springer}}, + keywords = {\#nosource} +} + +@inproceedings{cakmakPersonalizedHeartFailure2018, + title = {Personalized Heart Failure Severity Estimates Using Passive Smartphone Data}, + booktitle = {2018 {{IEEE International Conference}} on {{Big Data}} ({{Big Data}})}, + author = {Cakmak, Ayse S. and Reinertsen, Erik and Taylor, Herman A. and Shah, Amit J. and Clifford, Gari D.}, + date = {2018-12}, + pages = {1569--1574}, + publisher = {{IEEE}}, + location = {{Seattle, WA, USA}}, + doi = {10.1109/BigData.2018.8621980}, + abstract = {Heart failure (HF) is one of the leading causes of mortality in the United States with a high economic burden due to readmissions. We present a novel approach to remotely monitor quality of life in patients with HF using a smartphone app and a scalable cloud-based architecture. In a preliminary study, we assess continuous data from 10 HF subjects over a period of up to a year. Over 680 million samples of physical movement data, 9,000 geographic location updates, and 11,000 individual social networking events in the form of phone calls were captured from the app. Personalized models were constructed from these data to estimate self-reported quality of life using the Kansas City Cardiomyopathy Questionnaire (KCCQ), which has been shown to be a reliable health status measure for HF patients. Generalized linear models using only activity features were shown to reliably estimate the KCCQ score with an out of sample mean absolute error of 5.71\%. Personalized models for estimating the HF severity as mild or severe were also built as a proof of concept to detect when a subject’s data indicated a clinical deterioration. Average out of sample accuracy was 83\% for this binary classification problem. Creation of personalized models from passive smartphone data collected ‘in-the-wild’ to identify changes in HF severity appears possible. This new approach holds promise as a low burden and accurate method of monitoring HF symptoms, which could aid clinicians in early assessment and prevention of adverse outcomes.}, + eventtitle = {2018 {{IEEE International Conference}} on {{Big Data}} ({{Big Data}})}, + isbn = {978-1-5386-5035-6}, + langid = {english}, + file = {/home/src/Offline/Papers/cakmak et al_2018_personalized heart failure severity estimates using passive smartphone data.pdf} +} + +@article{camicioli1997talking, + title = {Talking While Walking: The Effect of a Dual Task in Aging and {{Alzheimer}}'s Disease}, + author = {Camicioli, Richard and Howieson, Diane and Lehman, Suzanne and Kaye, Jeffrey}, + date = {1997}, + journaltitle = {Neurology}, + volume = {48}, + number = {4}, + pages = {955--958}, + publisher = {{AAN Enterprises}}, + keywords = {\#nosource} +} + +@online{camntechActiwatchMiniOverviewN.D., + title = {Actiwatch {{Mini Overview}} - {{CamNtech}}}, + author = {CamNtech}, + year = {N.D.}, + url = {https://www.camntech.com/products/actiwatch-mini/actiwatch-mini-overview}, + urldate = {2019-12-30}, + file = {/home/cedarprince/Zotero/storage/JCEVMXM5/actiwatch-mini-overview.html} +} + +@book{camusStranger1996, + title = {The {{Stranger}}}, + author = {Camus, Albert}, + date = {1996}, + publisher = {{RandomHouse}}, + file = {/home/src/Offline/Papers/camus_1996_the stranger.pdf} +} + +@book{carey2012william, + title = {William Golding: {{The}} Man Who Wrote Lord of the Flies}, + author = {Carey, John}, + date = {2012}, + publisher = {{Faber \& Faber}} +} + +@article{carlesimo1995different, + title = {Different Components in Word-List Forgetting of Pure Amnesics, Degenerative Demented and Healthy Subjects}, + author = {Carlesimo, Giovanni A and Sabbadini, Maurizio and Fadda, Lucia and Caltagirone, Carlo}, + date = {1995}, + journaltitle = {Cortex}, + volume = {31}, + number = {4}, + pages = {735--745}, + publisher = {{[object Object]}}, + keywords = {\#nosource} +} + +@article{carlesimo1996mental, + title = {The Mental Deterioration Battery: Normative Data, Diagnostic Reliability and Qualitative Analyses of Cognitive Impairment}, + author = {Carlesimo, GA and Caltagirone, C and Gainotti, GUID and Fadda, L and Gallassi, R and Lorusso, S and Marfia, Ga and Marra, CAMI and Nocentini, U and Parnetti, L}, + date = {1996}, + journaltitle = {European neurology}, + shortjournal = {Eur. Neurol.}, + volume = {36}, + number = {6}, + pages = {378--384}, + publisher = {{Karger Publishers}}, + keywords = {\#nosource} +} + +@article{carlsonEightyearFollowupCommunitybased2000, + title = {Eight-Year Follow-up of a Community-Based Large Group Behavioral Smoking Cessation Intervention}, + author = {Carlson, Linda E and Taenzer, Paul and Koopmans, Jan and Bultz, Barry D}, + date = {2000-09}, + journaltitle = {Addictive Behaviors}, + shortjournal = {Addictive Behaviors}, + volume = {25}, + number = {5}, + pages = {725--741}, + issn = {03064603}, + doi = {10.1016/S0306-4603(00)00081-2}, + abstract = {Objective: To evaluate the effectiveness of a large group community-based behavioral smoking cessation intervention over an 8-year follow-up period and to determine precessation predictors of cessation at each follow-up time. Research Approach: Behavioral intervention followed by three longitudinal follow-up interviews. Setting: Regional Outpatient Cancer Centre. Study Participants: 971 participants in smoking cessation clinics held between 1986 and 1990. Intervention: Eight 90-minute sessions over 4 months utilizing education, self-monitoring, nicotine fading, a group quit date and behavioral modification techniques. Up to 110 smokers participated in each group program. Main Outcome Measures: Cessation rates at 3, 6, and 12 months postquit and at 8-year follow-up. Differences between successful and unsuccessful participants in precessation demographic, smoking history, and smoking behavior variables. Results: At 3 months postquit date, 39.3\% of the 971 participants reported that they were not smoking, decreasing to 32.1\% at 6 months and 26.0\% at 12 months. At the 8-year follow-up, 33.9\% of the original sample were contacted, and of those, 47.7\% reported that they were currently not smoking. There were nine predictors of cessation at the end of the program (3 months), which were similar to those previously reported in the literature. Similarly, at 6 and 12 months, six factors were associated with not smoking. At the 9-year follow-up the only variable predictive of continued abstinence was being female (p Ͻ .05). Conclusions: This program was successful in promoting smoking cessation and maintenance, even with its large-group format. Predictive factors were similar to those previously reported in the literature. © 2000 Elsevier Science Ltd.}, + langid = {english}, + file = {/home/src/Offline/Papers/carlson et al_2000_eight-year follow-up of a community-based large group behavioral smoking.pdf} +} + +@article{carltonPartyNevadaLegal2018, + title = {Is the {{Party Over}} for {{Nevada}}’s {{Legal Brothels}}? {{Possibility}} of a {{Ban Looms}}}, + shorttitle = {Is the {{Party Over}} for {{Nevada}}’s {{Legal Brothels}}?}, + author = {Carlton, Jim}, + date = {2018-06-16T11:00:00}, + journaltitle = {Wall Street Journal}, + issn = {0099-9660}, + url = {https://www.wsj.com/articles/is-the-party-over-for-nevadas-legal-brothels-possibility-of-a-ban-looms-1529146800}, + urldate = {2018-06-16}, + abstract = {Roughly 20 Nevada brothels where prostitution remains legal face possible bans amid November ballot measures and increased scrutiny of working conditions in the \#MeToo era.}, + entrysubtype = {newspaper}, + journalsubtitle = {US}, + langid = {american}, + keywords = {\#metoo,awaken,bordello,brothel,chicken ranch,community,desert club,general labor issues,general news,legal prostitution,legalized prostitution,love ranch,moonlite bunny ranch,nevada,political,prostitutes,prostitution,rebekah charleston,referendum,sex,sex-trafficking,social issues,society,trafficking}, + file = {/home/cedarprince/Zotero/storage/7YZ3B5XP/is-the-party-over-for-nevadas-legal-brothels-possibility-of-a-ban-looms-1529146800.html} +} + +@incollection{carrinoFunctionalGesturesHumanEnvironment2013, + title = {Functional {{Gestures}} for {{Human-Environment Interaction}}}, + booktitle = {Human-{{Computer Interaction}}. {{Interaction Modalities}} and {{Techniques}}}, + author = {Carrino, Stefano and Caon, Maurizio and Abou Khaled, Omar and Ingold, Rolf and Mugellini, Elena}, + editor = {Kurosu, Masaaki}, + date = {2013}, + series = {Lecture {{Notes}} in {{Computer Science}}}, + volume = {8007}, + pages = {167--176}, + publisher = {{Springer Berlin Heidelberg}}, + location = {{Berlin, Heidelberg}}, + doi = {10.1007/978-3-642-39330-3_18}, + abstract = {In this paper, we describe an opportunistic model for humanenvironment interaction. Such model is conceived to adapt the expressivity of a small lexicon of gestures through the use of generic functional gestures lowering the cognitive load on the user and reducing the system complexity. An interactive entity is modeled as a finite-state machine. A functional gesture is defined as the semantic meaning of an event that triggers a state transition and not as the movement to be performed. An interaction scenario has been designed in order to evaluate the features of the proposed model and to investigate how its application can enhance a post-WIMP human-environment interaction.}, + editorb = {Hutchison, David and Kanade, Takeo and Kittler, Josef and Kleinberg, Jon M. and Mattern, Friedemann and Mitchell, John C. and Naor, Moni and Nierstrasz, Oscar and Pandu Rangan, C. and Steffen, Bernhard and Sudan, Madhu and Terzopoulos, Demetri and Tygar, Doug and Vardi, Moshe Y. and Weikum, Gerhard}, + editorbtype = {redactor}, + isbn = {978-3-642-39329-7 978-3-642-39330-3}, + langid = {english}, + file = {/home/src/Papers/carrino et al_2013_functional gestures for human-environment interaction.pdf} +} + +@book{carterHumanBrainBook2019, + title = {The {{Human Brain Book}}}, + author = {Carter, Rita and Aldridge, Susan and Page, Martyn and Parker, Steve}, + date = {2019-01}, + publisher = {{DK Publishing}} +} + +@book{caseDeathsDespairFuture2020, + title = {Deaths of Despair and the Future of Capitalism}, + author = {Case, Anne and Deaton, Angus}, + date = {2020}, + publisher = {{Princeton University Press}}, + location = {{Princeton}}, + abstract = {"This book documents the decline of white-working class lives over the last half-century and examines the social and economic forces that have slowly made these lives more difficult. Case and Deaton argue that market and political power in the United States have moved away from labor towards capital-as unions have weakened and politics have become more favorable to business, corporations have become more powerful. Consolidation in some American industries, healthcare especially, has brought an increase in monopoly power in some product markets so that it is possible for firms to raise prices above what they would be in a freely competitive market. This, the authors argue, is a major cause of wage stagnation among working-class Americans and has played a substantial role in the increase in deaths of despair. Case and Deaton offer a way forward, including ideas that, even in our current political situation, may be feasible and improve lives"--}, + isbn = {978-0-691-19995-5}, + langid = {english}, + pagetotal = {1}, + keywords = {Capitalism,Drug Overdose,economics,Educational Status,Politics,Socioeconomic Factors,Suicide,United States}, + file = {/home/src/Papers/case_deaton_2020_deaths of despair and the future of capitalism.pdf} +} + +@article{casey2011comprehensive, + title = {Comprehensive Soldier Fitness: A Vision for Psychological Resilience in the {{US Army}}.}, + author = {Casey Jr, George W}, + date = {2011}, + journaltitle = {American Psychologist}, + shortjournal = {Am. Psychol.}, + volume = {66}, + number = {1}, + pages = {1}, + publisher = {{American Psychological Association}} +} + +@online{cdcBasicsAutismSpectrum2018, + title = {Basics {{About Autism Spectrum Disorder}} ({{ASD}}) | {{NCBDDD}} | {{CDC}}}, + author = {CDC}, + date = {2018-05-03}, + url = {https://www.cdc.gov/ncbddd/autism/facts.html}, + urldate = {2020-02-11}, + abstract = {Learn about autism signs, treatment, and what to do if you’re concerned.}, + langid = {american}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/cedarprince/Zotero/storage/6ZDPVIYZ/facts.html} +} + +@online{cdcCommunitiesSchoolsWorkplaces2020, + title = {Communities, {{Schools}}, {{Workplaces}}, \& {{Events}}}, + author = {CDC}, + date = {2020-04-30}, + url = {https://www.cdc.gov/coronavirus/2019-ncov/community/shared-congregate-house/guidance-shared-congregate-housing.html}, + urldate = {2020-07-15}, + abstract = {Cleaning and Disinfecting: Everyday steps, when someone is sick, and considerations for employers.}, + langid = {american}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/cedarprince/Zotero/storage/4UIN6499/guidance-shared-congregate-housing.html} +} + +@online{cdcCoronavirusDisease20192020, + title = {Coronavirus {{Disease}} 2019 ({{COVID-19}}) – {{Prevention}} \& {{Treatment}}}, + author = {CDC and CDC}, + date = {2020-02-15}, + url = {https://www.cdc.gov/coronavirus/2019-ncov/about/prevention-treatment.html}, + urldate = {2020-03-10}, + abstract = {The best way to prevent COVID-19 infection is to avoid exposure to this virus and use healthy habits.}, + langid = {american}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/cedarprince/Zotero/storage/FQRI6XXA/prevention-treatment.html} +} + +@online{cdcCoronavirusDisease20192020a, + title = {Coronavirus {{Disease}} 2019 ({{COVID-19}}) – {{Symptoms}}}, + author = {CDC and CDC}, + date = {2020-02-29}, + url = {https://www.cdc.gov/coronavirus/2019-ncov/about/symptoms.html}, + urldate = {2020-03-10}, + abstract = {Symptoms of COVID-19 include fever, cough, and shortness of breath. Call your doctor if you develop symptoms.}, + langid = {american}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/cedarprince/Zotero/storage/E68S5J9R/symptoms.html} +} + +@online{cdcCoronavirusDisease20192020b, + title = {Coronavirus {{Disease}} 2019 ({{COVID-19}}) {{Situation Summary}}}, + author = {CDC and CDC}, + date = {2020-03-09}, + url = {https://www.cdc.gov/coronavirus/2019-ncov/summary.html}, + urldate = {2020-03-10}, + abstract = {CDC is responding to the novel (new) coronavirus (COVID-19) outbreak. See information on source, spread, risk assessment and the latest U.S. updates.}, + langid = {american}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/cedarprince/Zotero/storage/CCKQQA6E/summary.html} +} + +@online{cdcDataCdcGov, + title = {Data.Cdc.Gov}, + author = {{CDC}}, + url = {https://data.cdc.gov/}, + urldate = {2022-03-17}, + abstract = {Data published by CDC public health programs to help save lives and protect people from health, safety, and security threats.}, + langid = {english}, + organization = {{Data.CDC.gov}}, + file = {/home/cedarprince/Zotero/storage/P7EUXPGI/data.cdc.gov.html} +} + +@online{cdcDevelopmentalDisabilitiesCDC2019, + title = {Developmental {{Disabilities}} | {{CDC}}}, + author = {CDC}, + date = {2019-09-26}, + url = {https://www.cdc.gov/ncbddd/developmentaldisabilities/index.html}, + urldate = {2020-07-14}, + abstract = {Developmental disabilities are a group of conditions due to an impairment in physical, learning, language, or behavior areas. Learn more.}, + langid = {american}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/cedarprince/Zotero/storage/WXDGIDBC/index.html} +} + +@online{cdcPeopleWhoAre2020, + title = {People {{Who Are}} at {{Higher Risk}} for {{Severe Illness}}}, + author = {{CDC}}, + date = {2020-02-11}, + url = {https://www.cdc.gov/coronavirus/2019-ncov/need-extra-precautions/people-at-higher-risk.html}, + urldate = {2020-04-28}, + abstract = {Coronavirus disease 2019 (COVID-19) is a virus (more specifically, a coronavirus) identified as the cause of an outbreak of respiratory illness first detected in Wuhan, China.}, + langid = {american}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/cedarprince/Zotero/storage/TFDTYLXF/people-at-higher-risk.html} +} + +@online{CensusBureauQuickFacts, + title = {U.{{S}}. {{Census Bureau QuickFacts}}: {{Colorado}}}, + shorttitle = {U.{{S}}. {{Census Bureau QuickFacts}}}, + url = {https://www.census.gov/quickfacts/CO}, + urldate = {2020-02-11}, + abstract = {Frequently requested statistics for: Colorado}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/QEUGRGRF/CO.html} +} + +@online{centersfordiseasecontrolandpreventionBehavioralRiskFactor, + title = {Behavioral {{Risk Factor Surveillance System}}}, + author = {{Centers for Disease Control and Prevention}}, + url = {http://www.cdc.gov/brfss} +} + +@online{centersfordiseasecontrolandpreventionCDCATSDRSocial, + type = {Database}, + title = {{{CDC}}/{{ATSDR Social Vulnerability Index}} 2018 {{Database US}}}, + author = {{Centers for Disease Control and Prevention}} +} + +@dataset{centersfordiseasecontrolBehavioralRiskFactor2020, + title = {Behavioral {{Risk Factor Surveillance System}} ({{BRFSS}}) {{Prevalence Data}} (2011 to Present)}, + author = {{Centers for Disease Control}}, + date = {2020-09-17}, + publisher = {{Centers for disease control and prevention}}, + url = {https://chronicdata.cdc.gov/Behavioral-Risk-Factors/Behavioral-Risk-Factor-Surveillance-System-BRFSS-P/dttw-5yxu}, + urldate = {2021-02-17} +} + +@misc{centersfordiseasecontrolContactTracingCDC2020, + title = {Contact {{Tracing}} - {{CDC}}'s {{Role}} and {{Approach}}.}, + author = {{Centers for Disease Control}}, + date = {2020-08-10}, + langid = {english}, + file = {/home/src/Papers/centers for disease control_contact tracing-cdc's role and approach.pdf} +} + +@online{centersfordiseasecontrolCOVID19GuidanceShared2020, + title = {{{COVID-19 Guidance}} for {{Shared}} or {{Congregate Housing}} | {{CDC}}}, + author = {{Centers for Disease Control}}, + date = {2020-04-25}, + url = {https://www.cdc.gov/coronavirus/2019-ncov/community/shared-congregate-house/guidance-shared-congregate-housing.html}, + urldate = {2020-07-22} +} + +@online{centersfordiseasecontrolHealthEquity2020, + title = {Health {{Equity}}}, + author = {{Centers for Disease Control}}, + date = {2020-03-11}, + url = {https://www.cdc.gov/chronicdisease/healthequity/index.htm}, + urldate = {2021-05-20} +} + +@article{centersfordiseasecontrolPreliminaryEstimatesPrevalence2020, + title = {Preliminary {{Estimates}} of the {{Prevalence}} of {{Selected Underlying Health Conditions Among Patients}} with {{Coronavirus Disease}} 2019 — {{United States}}, {{February}} 12–{{March}} 28, 2020.}, + author = {{Centers for Disease Control}}, + date = {2020}, + journaltitle = {MMWR Morb Mortal Wkly Rep} +} + +@online{centersformedicareandmedicaidMedicareClaimsSynthetic2020, + title = {Medicare {{Claims Synthetic Public Use Files}} ({{SynPUFs}})}, + author = {{Centers for Medicare and Medicaid}}, + date = {2020-02-11}, + url = {https://www.cms.gov/research-statistics-data-and-systems/downloadable-public-use-files/synpufs}, + urldate = {2021-05-20} +} + +@article{cepeda2006distributed, + title = {Distributed Practice in Verbal Recall Tasks: {{A}} Review and Quantitative Synthesis.}, + author = {Cepeda, Nicholas J and Pashler, Harold and Vul, Edward and Wixted, John T and Rohrer, Doug}, + date = {2006}, + journaltitle = {Psychological bulletin}, + shortjournal = {Psychol. Bull.}, + volume = {132}, + number = {3}, + pages = {354}, + publisher = {{American Psychological Association}} +} + +@article{cereda2020early, + title = {The Early Phase of the {{COVID-19}} Outbreak in {{Lombardy}}, {{Italy}}}, + author = {Cereda, Diletta and Tirani, Marcello and Rovida, Francesca and Demicheli, Vittorio and Ajelli, Marco and Poletti, Piero and Trentini, Frédéric and Guzzetta, Giorgio and Marziano, Valentina and Barone, Angelica and others}, + date = {2020}, + publisher = {{Arxiv}} +} + +@incollection{cevoliniNiklasLuhmannCard2016, + title = {Niklas {{Luhmann}}’s {{Card Index}}: {{Thinking Tool}}, {{Communication Partner}}, {{Publication Machine}}}, + booktitle = {Forgetting {{Machines}}: {{Knowledge Management Evolution}} in {{Early Modern Europe}}}, + author = {Cevolini, Alberto and Schmidt, Johannes}, + date = {2016-10-11}, + publisher = {{BRILL}}, + doi = {10.1163/9789004325258}, + isbn = {978-90-04-32525-8}, + langid = {english}, + file = {/home/src/Offline/Papers/cevolini_schmidt_2016_niklas luhmann’s card index.pdf} +} + +@article{chakrabortySocialInequitiesDistribution2020, + title = {Social Inequities in the Distribution of {{COVID-19}}: {{An}} Intra-Categorical Analysis of People with Disabilities in the {{U}}.{{S}}.}, + shorttitle = {Social Inequities in the Distribution of {{COVID-19}}}, + author = {Chakraborty, Jayajit}, + date = {2020-09}, + journaltitle = {Disability and Health Journal}, + shortjournal = {Disability and Health Journal}, + pages = {101007}, + issn = {19366574}, + doi = {10.1016/j.dhjo.2020.101007}, + abstract = {Background: While recent reports suggest that people with disabilities (PwDs) are likely to be adversely impacted by COVID-19 and face multiple challenges, previous research has not examined if COVID-19 burdens are unequally distributed with respect to the disability characteristics of the U.S. population. Objective: This article presents the first national scale study of the relationship between COVID-19 incidence and disability characteristics in the U.S. The objective is to determine whether COVID-19 incidence is significantly greater in counties containing higher percentages of socio-demographically disadvantaged PwDs, based on race, ethnicity, poverty status, age, and biological sex. Methods: This study integrates county-level data on confirmed COVID-19 cases from the Johns Hopkins Center for Systems Science and Engineering database with multiple disability variables from the 2018 American Community Survey. Statistical analyses are based on bivariate correlations and multivariate generalized estimating equations that consider spatial clustering in the data. Results: Greater COVID-19 incidence rate is significantly associated with: (1) higher percentages of PwDs who are Black, Asian, Hispanic, Native American, below poverty, under 18 years of age, and female; and (2) lower percentages of PwDs who are non-Hispanic White, above poverty, aged 65 or more years, and male, after controlling for spatial clustering. Conclusions: Socio-demographically disadvantaged PwDs are significantly overrepresented in counties with higher COVID-19 incidence compared to other PwDs. These findings represent an important starting point for more detailed investigation of the disproportionate impacts of COVID-19 on PwDs and highlight the urgent need for COVID-19 data collection systems to incorporate disability information.}, + langid = {english}, + file = {/home/src/Papers/chakraborty_2020_social inequities in the distribution of covid-19.pdf} +} + +@article{chalewEvaluatingNanoparticleBreakthrough2013, + title = {Evaluating {{Nanoparticle Breakthrough}} during {{Drinking Water Treatment}}}, + author = {Chalew, Talia E. Abbott and Ajmani, Gaurav S. and Huang, Haiou and Schwab, Kellogg J.}, + date = {2013-10}, + journaltitle = {Environmental Health Perspectives}, + shortjournal = {Environmental Health Perspectives}, + volume = {121}, + number = {10}, + pages = {1161-1166 6p}, + issn = {0091-6765}, + doi = {10.1289/ehp.1306574}, + abstract = {Background: Use of engineered nanoparticles (NPs) in consumer products is resulting in NPs in drinking water sources. Subsequent NP breakthrough into treated drinking water is a potential exposure route and human health threat. Objectives: In this study we investigated the breakthrough of common NPs-silver (Ag), titanium dioxide (TiO2), and zinc oxide (ZnO)-into finished drinking water following conventional and advanced treatment. Methods: NPs were spiked into five experimental waters: groundwater, surface water, synthetic freshwater, synthetic freshwater containing natural organic matter, and tertiary wastewater effluent. Bench-scale coagulation/flocculation/sedimentation simulated conventional treatment, and microfiltration (MF) and ultrafiltration (UF) simulated advanced treatment. We monitored breakthrough of NPs into treated water by turbidity removal and inductively coupled plasma-mass spectrometry (ICP-MS). Results: Conventional treatment resulted in 2-20\%, 3-8\%, and 48-99\% of Ag, TiO2, and ZnO NPs, respectively, or their dissolved ions remaining in finished water. Breakthrough following MF was 1-45\% for Ag, 0-44\% for TiO2, and 36-83\% for ZnO. With UF, NP breakthrough was 0-2\%, 0-4\%, and 2-96\% for Ag, TiO2, and ZnO, respectively. Variability was dependent on NP stability, with less breakthrough of aggregated NPs compared with stable NPs and dissolved NP ions. Conclusions: Although a majority of aggregated or stable NPs were removed by simulated con­ventional and advanced treatment, NP metals were detectable in finished water. As environmental NP concentrations increase, we need to consider NPs as emerging drinking water contaminants and determine appropriate drinking water treatment processes to fully remove NPs in order to reduce their potential harmful health outcomes.}, + keywords = {Data Analysis Software,Descriptive Statistics,Funding Source,Mass Spectrometry -- Methods,Nanoparticles,One-Way Analysis of Variance,Post Hoc Analysis,Sanitation,Silver,T-Tests,Titanium,Water Microbiology -- Methods,Water Supply -- Standards,Zinc Oxide}, + annotation = {Database: CINAHL Plus with Full Text}, + file = {/home/src/Offline/Papers/chalew et al_2013_evaluating nanoparticle breakthrough during drinking water treatment.pdf} +} + +@article{champion2002trauma, + title = {Trauma Scoring}, + author = {Champion, HR}, + date = {2002}, + journaltitle = {Scandinavian Journal of Surgery}, + shortjournal = {Scand. J. Surg.}, + volume = {91}, + number = {1}, + pages = {12--22}, + publisher = {{SAGE Publications Sage UK: London, England}} +} + +@unpublished{chan2020pact, + title = {Pact: {{Privacy}} Sensitive Protocols and Mechanisms for Mobile Contact Tracing}, + author = {Chan, Justin and Gollakota, Shyam and Horvitz, Eric and Jaeger, Joseph and Kakade, Sham and Kohno, Tadayoshi and Langford, John and Larson, Jonathan and Singanamalla, Sudheesh and Sunshine, Jacob and others}, + date = {2020}, + shortjournal = {ArXiv Prepr. ArXiv200403544}, + eprint = {2004.03544}, + eprinttype = {arxiv}, + archiveprefix = {arXiv} +} + +@article{changMobilityNetworkModels2021, + title = {Mobility Network Models of {{COVID-19}} Explain Inequities and Inform Reopening}, + author = {Chang, Serina and Pierson, Emma and Koh, Pang Wei and Gerardin, Jaline and Redbird, Beth and Grusky, David and Leskovec, Jure}, + date = {2021-01-07}, + journaltitle = {Nature}, + shortjournal = {Nature}, + volume = {589}, + number = {7840}, + pages = {82--87}, + issn = {0028-0836, 1476-4687}, + doi = {10.1038/s41586-020-2923-3}, + langid = {english}, + file = {/home/src/Papers/chang et al_2021_mobility network models of covid-19 explain inequities and inform reopening.pdf} +} + +@article{chanMakingFairChoices2016, + title = {Making {{Fair Choices}} on the {{Path}} to {{Universal Health Coverage}}}, + author = {Chan, Margaret}, + date = {2016-01-02}, + journaltitle = {Health Systems \& Reform}, + shortjournal = {Health Systems \& Reform}, + volume = {2}, + number = {1}, + pages = {5--7}, + issn = {2328-8604, 2328-8620}, + doi = {10.1080/23288604.2015.1111288}, + langid = {english}, + file = {/home/src/Papers/chan_2016_making fair choices on the path to universal health coverage.pdf} +} + +@report{ChapterLocationMonitoring, + title = {Chapter 3: {{Location Monitoring}} ({{Probation}} and {{Supervised Release Conditions}})}, + shorttitle = {Chapter 3}, + institution = {{United States Courts}}, + url = {https://www.uscourts.gov/services-forms/location-monitoring-probation-supervised-release-conditions}, + urldate = {2020-04-22}, + abstract = {A. Statutory Authority Under 18 U.S.C. § 3563(b)(6), the court may provide that the defendant “refrain from frequenting specified kinds of places or from associating unnecessarily with specified persons.” Under 18 U.S.C. § 3563(b)(13), the court may provide that the defendant “reside in a specified place or area, or refrain from residing in a specified place or area.”}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/9PEKRFU9/location-monitoring-probation-supervised-release-conditions.html} +} + +@article{charles2003skin, + title = {Skin Bleaching, Self-Hate, and Black Identity in {{Jamaica}}}, + author = {Charles, Christopher AD}, + date = {2003}, + journaltitle = {Journal of Black Studies}, + shortjournal = {J. Black Stud.}, + volume = {33}, + number = {6}, + pages = {711--728}, + publisher = {{Sage Publications}} +} + +@incollection{chase1973mind, + title = {The Mind's Eye in Chess}, + booktitle = {Visual Information Processing}, + author = {Chase, William G and Simon, Herbert A}, + date = {1973}, + pages = {215--281}, + publisher = {{Elsevier}} +} + +@online{chaykaLibraryLastResort, + title = {The {{Library}} of {{Last Resort}}}, + author = {Chayka, Kyle}, + url = {https://nplusonemag.com/online-only/online-only/the-library-of-last-resort/}, + urldate = {2021-06-18} +} + +@book{chengMathematicianManifestoRethinking2020, + title = {X+ {{Y}}: {{A Mathematician}}'s {{Manifesto}} for {{Rethinking Gender}}}, + author = {Cheng, Eugenia}, + date = {2020}, + publisher = {{Basic Books}} +} + +@video{chenJuliaCon2017Taking, + title = {{{JuliaCon}} 2017 | {{Taking Vector Transposes Seriously}} | {{Jiahao Chen}}}, + editor = {Chen, Jiahao}, + url = {https://www.youtube.com/watch?v=C2RO34b_oPM}, + urldate = {2020-06-03}, + abstract = {Visit http://julialang.org/ to download Julia.}, + editortype = {director} +} + +@report{chenNursingHomeStaff2020, + title = {Nursing {{Home Staff Networks}} and {{COVID-19}}}, + author = {Chen, M. Keith and Chevalier, Judith and Long, Elisa}, + date = {2020-07}, + number = {w27608}, + pages = {w27608}, + institution = {{National Bureau of Economic Research}}, + location = {{Cambridge, MA}}, + doi = {10.3386/w27608}, + abstract = {Nursing homes and other long-term care facilities account for a disproportionate share of COVID-19 cases and fatalities worldwide. Outbreaks in U.S. nursing homes have persisted despite nationwide visitor restrictions beginning in mid-March. An early report issued by the Centers for Disease Control and Prevention identified staff members working in multiple nursing homes as a likely source of spread from the Life Care Center in Kirkland, Washington to other skilled nursing facilities. The full extent of staff connections between nursing homes—and the role these connections serve in spreading a highly contagious respiratory infection—is currently unknown given the lack of centralized data on cross-facility employment. We perform the first large-scale analysis of nursing home connections via shared staff and contractors using devicelevel geolocation data from 50 million smartphones, and find that 5.1 percent of smartphone users who visit a nursing home for at least one hour also visit another facility during our 11-week study period—even after visitor restrictions were imposed. We construct network measures of connectedness and estimate that nursing homes, on average, share connections with 7 other facilities. Controlling for demographic and other factors, a home’s staff-network connections and its centrality within the greater network strongly predict COVID-19 cases. Traditional federal regulatory metrics of nursing home quality are unimportant in predicting outbreaks, consistent with recent research. Multivariate regressions comparing demographically and geographically similar nursing homes suggest that 49 percent of COVID cases among nursing home residents are attributable to staff movement between facilities.}, + langid = {english}, + file = {/home/src/Papers/chen et al_2020_nursing home staff networks and covid-19.pdf} +} + +@article{chenPedagogicalApproachCreate, + title = {A {{Pedagogical Approach}} to {{Create}} and {{Assess Domain-Specific Data Science Learning Materials}} in the {{Biomedical Sciences}}}, + author = {Chen, Daniel Y}, + pages = {200}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Chen_A Pedagogical Approach to Create and Assess Domain-Specific Data Science.pdf} +} + +@article{chidambaram2020state, + title = {State Reporting of Cases and Deaths Due to {{COVID-19}} in Long-Term Care Facilities}, + author = {Chidambaram, P}, + date = {2020}, + journaltitle = {San Francisco: Kaiser Family Foundation}, + shortjournal = {San Franc. Kais. Fam. Found.} +} + +@unpublished{cho2020contact, + title = {Contact Tracing Mobile Apps for {{COVID-19}}: {{Privacy}} Considerations and Related Trade-Offs}, + author = {Cho, Hyunghoon and Ippolito, Daphne and Yu, Yun William}, + date = {2020}, + shortjournal = {ArXiv Prepr. ArXiv200311511}, + eprint = {2003.11511}, + eprinttype = {arxiv}, + archiveprefix = {arXiv} +} + +@article{chowkwanyun2020racial, + title = {Racial Health Disparities and {{Covid-19}}—Caution and Context}, + author = {Chowkwanyun, Merlin and Reed Jr, Adolph L}, + date = {2020}, + journaltitle = {New England Journal of Medicine}, + shortjournal = {N. Engl. J. Med.}, + publisher = {{Mass Medical Soc}} +} + +@article{christamareestephanDiagnosingMildCognitive2013, + title = {Diagnosing {{Mild Cognitive Impairment}} ({{MCI}}) in Clinical Trials: A Systematic Review}, + shorttitle = {Diagnosing {{Mild Cognitive Impairment}} ({{MCI}}) in Clinical Trials}, + author = {Christa Maree Stephan, Blossom and Minett, Thais and Pagett, Emma and Siervo, Mario and Brayne, Carol and McKeith, Ian G}, + date = {2013}, + journaltitle = {BMJ Open}, + shortjournal = {BMJ Open}, + volume = {3}, + number = {2}, + pages = {e001909}, + issn = {2044-6055, 2044-6055}, + doi = {10.1136/bmjopen-2012-001909}, + abstract = {Objective: To describe how criteria for amnestic Mild Cognitive Impairment (aMCI) have been operationalised in randomised controlled clinical trials (RCTs). Design: Systematic review. Information sources: EMBASE, PubMed and PSYCHInfo were searched from their inception to February 2012. Electronic clinical trial registries were also searched (February 2012). Study selection: RCTs were included where participant selection was made using Petersen et al-defined aMCI. There was no restriction on intervention type or the outcome tested. Data extraction: For each trial, we extracted information on study design, demographics, exclusion criteria and the operationalisation strategy for the five aMCI diagnostic criteria including: (1) memory complaint, (2) normal general cognitive function, (3) memory impairment, (4) no functional impairment and (5) no dementia. Results: 223 articles and 278 registered trials were reviewed, of which 22 met inclusion criteria. Various methods were applied for operationalising aMCI criteria resulting in variability in participant selection. Memory complaint and assessment of general cognitive function were the most consistently measured criteria. There was large heterogeneity in the neuropsychological methods used to determine memory impairment. It was not possible to assess the impact of these differences on case selection accuracy for dementia prediction. Further limitations include selective and unclear reporting of how each of the criteria was measured. Conclusions: The results highlight the urgent need for a standardised approach to map aMCI. Lack of uniformity in clinical diagnosis, however, is not exclusively a problem for MCI but also for other clinical states such as dementia including Alzheimer’s disease, Lewy Body, frontotemporal or vascular dementia. Defining a uniform approach to MCI classification, or indeed for any classification concept within the field of dementia, should be a priority if further trials are to be undertaken in the older aged population based on these concepts.}, + langid = {english}, + file = {/home/src/Offline/Papers/christa maree stephan et al_2013_diagnosing mild cognitive impairment (mci) in clinical trials.pdf} +} + +@article{christensen2013prenatal, + title = {Prenatal Valproate Exposure and Risk of Autism Spectrum Disorders and Childhood Autism}, + author = {Christensen, Jakob and Grønborg, Therese Koops and Sørensen, Merete Juul and Schendel, Diana and Parner, Erik Thorlund and Pedersen, Lars Henning and Vestergaard, Mogens}, + date = {2013}, + journaltitle = {Jama}, + volume = {309}, + number = {16}, + pages = {1696--1703}, + publisher = {{American Medical Association}} +} + +@online{christianManageCitationsZettelkasten, + title = {Manage {{Citations}} for a {{Zettelkasten}}}, + author = {{christian}}, + url = {https://www.zettelkasten.de/posts/bibliography-zettelkasten/}, + urldate = {2020-03-08}, + abstract = {The Zettelkasten note-taking method has made book writing and writing scientific papers easy for hundreds of years already.}, + langid = {english}, + organization = {{Zettelkasten Method}}, + file = {/home/cedarprince/Zotero/storage/7LHY69NL/bibliography-zettelkasten.html} +} + +@article{chu2000reliability, + title = {The Reliability and Validity of the Alzheimer's Disease Assessment Scale Cognitive Subscale ({{ADAS-Cog}}) among the Elderly Chinese in Hong Kong.}, + author = {Chu, LW and Chiu, KC and Hui, SL and Yu, GK and Tsui, WJ and Lee, PW}, + date = {2000}, + journaltitle = {Annals of the Academy of Medicine, Singapore}, + shortjournal = {Ann. Acad. Med. Singapore}, + volume = {29}, + number = {4}, + pages = {474--485}, + keywords = {\#nosource} +} + +@article{chuoStrategiesEvaluatingTelehealth2020, + title = {Strategies for {{Evaluating Telehealth}}}, + author = {Chuo, John and Macy, Michelle L. and Lorch, Scott A.}, + date = {2020-11}, + journaltitle = {Pediatrics}, + shortjournal = {Pediatrics}, + volume = {146}, + number = {5}, + eprint = {32817398}, + eprinttype = {pmid}, + pages = {e20201781}, + issn = {0031-4005}, + doi = {10.1542/peds.2020-1781}, + pmcid = {PMC7887706}, + file = {/Users/jzelko3/Knowledgebase/Papers/Chuo et al_2020_Strategies for Evaluating Telehealth.pdf} +} + +@online{CleaningEmbrace, + title = {Cleaning {{Embrace}}}, + url = {http://support.empatica.com/hc/en-us/articles/210123303-Cleaning-Embrace}, + urldate = {2020-02-11}, + abstract = {We suggest cleaning Embrace once a week with a moistened cloth and a mild soap or detergent. Make sure to rinse the soap off thoroughly before wearing your Embrace. If you want to clean the band s...}, + langid = {american}, + organization = {{Empatica Support}}, + file = {/home/cedarprince/Zotero/storage/L98KJ85Q/210123303-Cleaning-Embrace.html} +} + +@online{clearZettelkastenHowOne2020, + title = {Zettelkasten — {{How One German Scholar Was So Freakishly Productive}}}, + author = {Clear, David B.}, + date = {2020-01-06T19:34:37}, + url = {https://writingcooperative.com/zettelkasten-how-one-german-scholar-was-so-freakishly-productive-997e4e0ca125}, + urldate = {2020-03-08}, + abstract = {Luhmann wrote over 70 books and more than 400 scholarly articles using the Zettelkasten notetaking method.}, + langid = {english}, + organization = {{Medium}}, + file = {/home/cedarprince/Zotero/storage/35M92CSF/zettelkasten-how-one-german-scholar-was-so-freakishly-productive-997e4e0ca125.html} +} + +@article{cliffordOutTouchAudio2014, + title = {Out of {{Touch}} : {{From}} Audio Recordings to Phone Apps to Mattress Sensors, Noncontact Systems Offer a Less Cumbersome Way to Monitor Sleep.}, + shorttitle = {Out of {{Touch}}}, + author = {Clifford, Gari D. and Gederi, Elnaz}, + date = {2014-09}, + journaltitle = {IEEE Pulse}, + shortjournal = {IEEE Pulse}, + volume = {5}, + number = {5}, + pages = {19--21}, + issn = {2154-2287}, + doi = {10.1109/MPUL.2014.2339253}, + langid = {english}, + file = {/home/src/Offline/Papers/clifford_gederi_2014_out of touch.pdf} +} + +@misc{ClinicalGlobalImpressions, + title = {Clinical {{Global Impressions}}}, + keywords = {schizophrenia}, + file = {/home/src/Offline/Papers/clinical global impressions.pdf} +} + +@misc{ClinicianRatedDimensionsPsychosis, + title = {Clinician-{{Rated Dimensions}} of {{Psychosis Symptom Severity}}}, + publisher = {{American Psychiatric Association}}, + keywords = {schizophrenia}, + file = {/home/src/Offline/Papers/clinician-rated dimensions of psychosis symptom severity.pdf} +} + +@article{cohen2005specific, + title = {Specific Genetic Disorders and Autism: Clinical Contribution towards Their Identification}, + author = {Cohen, David and Pichard, Nadège and Tordjman, Sylvie and Baumann, Clarisse and Burglen, Lydie and Excoffier, Elsa and Lazar, Gabriela and Mazet, Philippe and Pinquier, Clément and Verloes, Alain and others}, + date = {2005}, + journaltitle = {Journal of autism and developmental disorders}, + shortjournal = {J. Autism Dev. Disord.}, + volume = {35}, + number = {1}, + pages = {103--116}, + publisher = {{Springer}} +} + +@article{cohenRatingScaleMeasures2014, + title = {Rating Scale Measures Are Associated with {{Noldus EthoVision-XT}} Video Tracking of Behaviors of Children on the Autism Spectrum}, + author = {Cohen, Ira L and Gardner, Judith M and Karmel, Bernard Z and Kim, Soh-Yule}, + date = {2014}, + journaltitle = {Molecular Autism}, + shortjournal = {Mol Autism}, + volume = {5}, + number = {1}, + pages = {15}, + issn = {2040-2392}, + doi = {10.1186/2040-2392-5-15}, + abstract = {Background: Children with Autism Spectrum Disorder (ASD) show unusual social behaviors and repetitive behaviors. Some of these behaviors, e.g., time spent in an area or turning rate/direction, can be automatically tracked. Automated tracking has several advantages over subjective ratings including reliability, amount of information provided, and consistency across laboratories, and is potentially of importance for diagnosis, animal models and objective assessment of treatment efficacy. However, its validity for ASD has not been examined. In this exploratory study, we examined associations between rating scale data with automated tracking of children’s movements using the Noldus EthoVision XT system; i.e., tracking not involving a human observer. Based on our observations and previous research, we predicted that time spent in the periphery of the room would be associated with autism severity and that rate and direction of turning would be associated with stereotypies. Methods: Children with and without ASD were observed in a free-play situation for 3 min before and 3 min after Autism Diagnostic Observation Scale – Generic (ADOS-G) testing. The Noldus system provided measures of the rate and direction of turning, latency to approach and time spend near the periphery or the parent. Results: Ratings of the severity of maladaptive social behaviors, stereotypies, autism severity, and arousal problems were positively correlated with increases in percent time spent in the periphery in the total sample and in the ASD subset. Adaptive social communication skills decreased with increases in the percentage of time spent in the periphery and increases in the latency to approach the parent in the ASD group. The rate and direction of turning was linked with stereotypies only in the group without ASD (the faster the rate of a turn to the left, the worse the rating). In the ASD group, there was a shift from a neutral turning bias prior to the ADOS assessment to a strong left turn bias after the ADOS assessment. In the entire sample, this left turn bias was associated with measures of autism severity. Conclusion: Results suggest that automated tracking yields valid and unbiased information for assessing children with autism. Turning bias is an interesting and unexplored measure related to autism.}, + langid = {english}, + file = {/home/src/Offline/Papers/cohen et al_2014_rating scale measures are associated with noldus ethovision-xt video tracking.pdf} +} + +@article{cohenSpeechDeficitsSerious2014, + title = {Speech Deficits in Serious Mental Illness: {{A}} Cognitive Resource Issue?}, + shorttitle = {Speech Deficits in Serious Mental Illness}, + author = {Cohen, Alex S. and McGovern, Jessica E. and Dinzeo, Thomas J. and Covington, Michael A.}, + date = {2014-12}, + journaltitle = {Schizophrenia Research}, + shortjournal = {Schizophrenia Research}, + volume = {160}, + number = {1-3}, + pages = {173--179}, + issn = {09209964}, + doi = {10.1016/j.schres.2014.10.032}, + abstract = {Speech deficits, notably those involved in psychomotor retardation, blunted affect, alogia and poverty of content of speech, are pronounced in a wide range of serious mental illnesses (e.g., schizophrenia, unipolar depression, bipolar disorders). The present project evaluated the degree to which these deficits manifest as a function of cognitive resource limitations. We examined natural speech from 52 patients meeting criteria for serious mental illnesses (i.e., severe functional deficits with a concomitant diagnosis of schizophrenia, unipolar and/or bipolar affective disorders) and 30 non-psychiatric controls using a range of objective, computer-based measures tapping speech production (“alogia”), variability (“blunted vocal affect”) and content (“poverty of content of speech”). Subjects produced natural speech during a baseline condition and while engaging in an experimentally-manipulated cognitively-effortful task. For correlational analysis, cognitive ability was measured using a standardized battery. Generally speaking, speech deficits did not differ as a function of SMI diagnosis. However, every speech production and content measure was significantly abnormal in SMI versus control groups. Speech variability measures generally did not differ between groups. For both patients and controls as a group, speech during the cognitively-effortful task was sparser and less rich in content. Relative to controls, patients were abnormal under cognitive load with respect only to average pause length. Correlations between the speech variables and cognitive ability were only significant for this same variable: average pause length. Results suggest that certain speech deficits, notably involving pause length, may manifest as a function of cognitive resource limitations. Implications for treatment, research and assessment are discussed.}, + langid = {english}, + file = {/home/src/Offline/Papers/cohen et al_2014_speech deficits in serious mental illness.pdf} +} + +@report{colemanIncreasedRiskPsychiatric2021, + type = {preprint}, + title = {Increased Risk of Psychiatric Sequelae of {{COVID-19}} Is Highest Early in the Clinical Course}, + author = {Coleman, Ben and Casiraghi, Elena and Blau, Hannah and Chan, Lauren and Haendel, Melissa and Laraway, Bryan and Callahan, Tiffany J and Deer, Rachel R and Wilkins, Ken and Reese, Justin and Robinson, Peter N}, + date = {2021-12-02}, + institution = {{Epidemiology}}, + doi = {10.1101/2021.11.30.21267071}, + abstract = {Background: COVID-19 has been shown to increase the risk of adverse mental health consequences. A recent electronic health record (EHR)-based observational study showed an almost two-fold increased risk of new-onset mental illness in the first 90 days following a diagnosis of acute COVID-19.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Coleman et al_2021_Increased risk of psychiatric sequelae of COVID-19 is highest early in the.pdf} +} + +@article{CommunicatingSlipBoxes, + title = {Communicating with {{Slip Boxes}} by {{Niklas Luhmann}}}, + pages = {6}, + langid = {english}, + file = {/home/src/Offline/Papers/communicating with slip boxes by niklas luhmann.pdf} +} + +@article{conde2020neurotropism, + title = {Neurotropism of {{SARS-CoV}} 2: {{Mechanisms}} and Manifestations}, + author = {Conde, Giancarlos and Pájaro, Loraine D Quintana and Marzola, Iván D Quintero and Villegas, Yancarlos Ramos and Salazar, Luis R Moscote}, + date = {2020}, + journaltitle = {Journal of the neurological sciences}, + shortjournal = {J. Neurol. Sci.}, + publisher = {{Elsevier}} +} + +@incollection{conroy2016current, + title = {Current and Emerging Trends for Residential Supports for Persons with Intellectual and Developmental Disabilities and the Impact of Managed Care Initiatives}, + booktitle = {Health Care for People with Intellectual and Developmental Disabilities across the Lifespan}, + author = {Conroy, James W and Dale, Steven J and McCaffrey, Robert P}, + date = {2016}, + pages = {255--263}, + publisher = {{Springer}} +} + +@article{cook2012casas, + title = {{{CASAS}}: {{A}} Smart Home in a Box}, + author = {Cook, Diane J and Crandall, Aaron S and Thomas, Brian L and Krishnan, Narayanan C}, + date = {2012}, + journaltitle = {Computer}, + volume = {46}, + number = {7}, + pages = {62--69}, + publisher = {{IEEE}}, + keywords = {\#nosource} +} + +@article{cookAnalyzingActivityBehavior2015, + title = {Analyzing {{Activity Behavior}} and {{Movement}} in a {{Naturalistic Environment Using Smart Home Techniques}}}, + author = {Cook, Diane J. and Schmitter-Edgecombe, Maureen and Dawadi, Prafulla}, + date = {2015-11}, + journaltitle = {IEEE Journal of Biomedical and Health Informatics}, + shortjournal = {IEEE J. Biomed. Health Inform.}, + volume = {19}, + number = {6}, + pages = {1882--1892}, + issn = {2168-2194, 2168-2208}, + doi = {10.1109/JBHI.2015.2461659}, + abstract = {One of the many services that intelligent systems can provide is the ability to analyze the impact of different medical conditions on daily behavior. In this study we use smart home and wearable sensors to collect data while (n=84) older adults perform complex activities of daily living. We analyze the data using machine learning techniques and reveal that differences between healthy older adults and adults with Parkinson disease not only exist in their activity patterns, but that these differences can be automatically recognized. Our machine learning classifiers reach an accuracy of 0.97 with an AUC value of 0.97 in distinguishing these groups. Our permutation-based testing confirms that the sensor-based differences between these groups are statistically significant.}, + langid = {english}, + file = {/home/src/Offline/Papers/cook et al_2015_analyzing activity behavior and movement in a naturalistic environment using.pdf} +} + +@article{cooperAcceptabilityTreatmentDepression2003, + title = {The Acceptability of Treatment for Depression among {{African-American}}, {{Hispanic}}, and White Primary Care Patients}, + author = {Cooper, Lisa A. and Gonzales, Junius J. and Gallo, Joseph J. and Rost, Kathryn M. and Meredith, Lisa S. and Rubenstein, Lisa V. and Wang, Nae-Yuh and Ford, Daniel E.}, + date = {2003}, + journaltitle = {Medical care}, + shortjournal = {Med. Care}, + pages = {479--489}, + publisher = {{JSTOR}}, + isbn = {0025-7079} +} + +@article{copelandComputerizedPsychiatricDiagnostic1986, + title = {A Computerized Psychiatric Diagnostic System and Case Nomenclature for Elderly Subjects: {{GMS}} and {{AGECAT}}}, + shorttitle = {A Computerized Psychiatric Diagnostic System and Case Nomenclature for Elderly Subjects}, + author = {Copeland, J. R. M. and Dewey, M. E. and Griffiths-Jones, H. M.}, + date = {1986-02}, + journaltitle = {Psychological Medicine}, + shortjournal = {Psychol. Med.}, + volume = {16}, + number = {1}, + pages = {89--99}, + issn = {0033-2917, 1469-8978}, + doi = {10.1017/S0033291700057779}, + abstract = {Synopsis The Geriatric Mental State and a new computerized diagnostic system, AGECAT, are briefly described. A nomenclature for designating cases for epidemiological work is introduced. Concordance between AGECAT and psychiatrists' diagnoses for these studies, hospital and community based (total of 541 subjects), achieved overall kappa values of 0·84 for a psychiatric hospital sample and 0·74 for a community sample. The values for depression and organic illness specifically in these settings were psychiatric hospital 0·80/0·86, and community 0·80/0·88, respectively.}, + langid = {english}, + file = {/home/src/Offline/Papers/copeland et al_1986_a computerized psychiatric diagnostic system and case nomenclature for elderly.pdf} +} + +@book{cormenIntroductionAlgorithms2001, + title = {Introduction to Algorithms}, + editor = {Cormen, Thomas H. and Cormen, Thomas H.}, + date = {2001}, + edition = {2nd ed}, + publisher = {{MIT Press}}, + location = {{Cambridge, Mass}}, + isbn = {978-0-262-03293-3}, + langid = {english}, + pagetotal = {1180}, + keywords = {Computer algorithms,Computer programming}, + file = {/home/src/Offline/Papers/cormen_cormen_2001_introduction to algorithms.pdf} +} + +@book{cormenIntroductionAlgorithms2009, + title = {Introduction to Algorithms}, + editor = {Cormen, Thomas H.}, + date = {2009}, + edition = {3rd ed}, + publisher = {{MIT Press}}, + location = {{Cambridge, Mass}}, + isbn = {978-0-262-03384-8 978-0-262-53305-8}, + langid = {english}, + pagetotal = {1292}, + keywords = {Computer algorithms,Computer programming}, + annotation = {OCLC: ocn311310321}, + file = {/home/src/Papers/cormen_2009_introduction to algorithms.pdf} +} + +@book{cormier2014basic, + title = {Basic Processes of Learning, Cognition, and Motivation}, + author = {Cormier, Stephen M}, + date = {2014}, + publisher = {{Psychology Press}} +} + +@online{CoronavirusDisease2019, + title = {Coronavirus {{Disease}} 2019 ({{COVID-19}})-{{Associated Hospitalization Surveillance Network}} ({{COVID-NET}}) | {{CDC}}}, + url = {https://www.cdc.gov/coronavirus/2019-ncov/covid-data/covid-net/purpose-methods.html}, + urldate = {2021-06-08} +} + +@article{cosmicCOSMICCohortStudies2013, + title = {{{COSMIC}} ({{Cohort Studies}} of {{Memory}} in an {{International Consortium}}): {{An}} International Consortium to Identify Risk and Protective Factors and Biomarkers of Cognitive Ageing and Dementia in Diverse Ethnic and Sociocultural Groups}, + shorttitle = {{{COSMIC}} ({{Cohort Studies}} of {{Memory}} in an {{International Consortium}})}, + author = {{COSMIC} and Sachdev, Perminder S and Lipnicki, Darren M and Kochan, Nicole A and Crawford, John D and Rockwood, Kenneth and Xiao, Shifu and Li, Juan and Li, Xia and Brayne, Carol and Matthews, Fiona E and Stephan, Blossom CM and Lipton, Richard B and Katz, Mindy J and Ritchie, Karen and Carrière, Isabelle and Ancelin, Marie-Laure and Seshadri, Sudha and Au, Rhoda and Beiser, Alexa S and Lam, Linda CW and Wong, Candy HY and Fung, Ada WT and Kim, Ki Woong and Han, Ji Won and Kim, Tae Hui and Petersen, Ronald C and Roberts, Rosebud O and Mielke, Michelle M and Ganguli, Mary and Dodge, Hiroko H and Hughes, Tiffany and Anstey, Kaarin J and Cherbuin, Nicolas and Butterworth, Peter and Ng, Tze Pin and Gao, Qi and Reppermund, Simone and Brodaty, Henry and Meguro, Kenichi and Schupf, Nicole and Manly, Jennifer and Stern, Yaakov and Lobo, Antonio and Lopez-Anton, Raúl and Santabárbara, Javier}, + date = {2013-12}, + journaltitle = {BMC Neurology}, + shortjournal = {BMC Neurol}, + volume = {13}, + number = {1}, + pages = {165}, + issn = {1471-2377}, + doi = {10.1186/1471-2377-13-165}, + abstract = {Discussion: The challenges of international consortia like COSMIC include efficient communication among members, extended use of resources, and data harmonisation. Successful harmonisation will facilitate projects investigating rates of cognitive decline, risk and protective factors for mild cognitive impairment, and biomarkers of mild cognitive impairment and dementia. Extended implications of COSMIC could include standardised ways of collecting and reporting data, and a rich cognitive ageing database being made available to other researchers. COSMIC could potentially transform our understanding of the epidemiology of cognitive ageing, and have a world-wide impact on promoting successful ageing.}, + langid = {english}, + file = {/home/src/Offline/Papers/cosmic et al_2013_cosmic (cohort studies of memory in an international consortium).pdf} +} + +@article{costaMultiscaleEntropyAnalysis, + title = {Multiscale {{Entropy Analysis}} ({{MSE}})}, + author = {Costa, Madalena and Goldberger, Ary L}, + pages = {8}, + langid = {english}, + keywords = {center-for-discovery}, + file = {/home/cedarprince/Zotero/storage/8426WEVQ/Costa and Goldberger - Multiscale Entropy Analysis (MSE).pdf;/home/src/Offline/Papers/costa_goldberger_multiscale entropy analysis (mse).pdf} +} + +@article{covid2020severe, + title = {Severe Outcomes among Patients with Coronavirus Disease 2019 ({{COVID-19}})—{{United States}}, {{February}} 12–{{March}} 16, 2020}, + author = {{CDC}}, + date = {2020}, + journaltitle = {MMWR. Morbidity and Mortality Weekly Report}, + shortjournal = {MMWR Morb Mortal Wkly Rep}, + volume = {69}, + number = {12}, + pages = {343--346} +} + +@article{covingtonSchizophreniaStructureLanguage2005, + title = {Schizophrenia and the Structure of Language: {{The}} Linguist's View}, + shorttitle = {Schizophrenia and the Structure of Language}, + author = {Covington, Michael A. and He, Congzhou and Brown, Cati and Naçi, Lorina and McClain, Jonathan T. and Fjordbak, Bess Sirmon and Semple, James and Brown, John}, + date = {2005-09}, + journaltitle = {Schizophrenia Research}, + shortjournal = {Schizophrenia Research}, + volume = {77}, + number = {1}, + pages = {85--98}, + issn = {09209964}, + doi = {10.1016/j.schres.2005.01.016}, + abstract = {Patients with schizophrenia often display unusual language impairments. This is a wide ranging critical review of the literature on language in schizophrenia since the 19th century. We survey schizophrenic language level by level, from phonetics through phonology, morphology, syntax, semantics, and pragmatics.}, + langid = {english}, + file = {/home/src/Offline/Papers/covington et al_2005_schizophrenia and the structure of language.pdf} +} + +@online{CPSCMemorandum, + title = {{{CPSC Memorandum}}}, + url = {https://www.cpsc.gov/s3fs-public/pdfs/blk_media_f963_05102010.pdf}, + urldate = {2020-02-11}, + file = {/home/src/Offline/Papers/cpsc memorandum.pdf} +} + +@article{cronbach1955construct, + title = {Construct Validity in Psychological Tests.}, + author = {Cronbach, Lee J and Meehl, Paul E}, + date = {1955}, + journaltitle = {Psychological bulletin}, + shortjournal = {Psychol. Bull.}, + volume = {52}, + number = {4}, + pages = {281}, + publisher = {{American Psychological Association}} +} + +@book{crosbyRuralPopulationsHealth2012, + title = {Rural Populations and Health: {{Determinants}}, Disparities, and Solutions}, + author = {Crosby, Richard and Wendel, Monica L. and Vanderpool, Robin C. and Casey, Baretta R.}, + date = {2012}, + publisher = {{John Wiley \& Sons}}, + isbn = {1-118-00430-2} +} + +@article{csuklyDifferentiationAmnesticType2016, + title = {The {{Differentiation}} of {{Amnestic Type MCI}} from the {{Non-Amnestic Types}} by {{Structural MRI}}}, + author = {Csukly, Gábor and Sirály, Enikő and Fodor, Zsuzsanna and Horváth, András and Salacz, Pál and Hidasi, Zoltán and Csibri, Éva and Rudas, Gábor and Szabó, Ádám}, + date = {2016-03-30}, + journaltitle = {Frontiers in Aging Neuroscience}, + shortjournal = {Front. Aging Neurosci.}, + volume = {8}, + issn = {1663-4365}, + doi = {10.3389/fnagi.2016.00052}, + abstract = {Introduction: While amnestic mild cognitive impairment (aMCI) and non-amnestic mild cognitive impairment (naMCI) are theoretically different entities, only a few investigations studied the structural brain differences between these subtypes of mild cognitive impairment. The aim of the study was to find the structural differences between aMCI and naMCI, and to replicate previous findings on the differentiation between aMCI and healthy controls. Methods: Altogether 62 aMCI, naMCI, and healthy control subjects were included into the study based on the Petersen criteria. All patients underwent a routine brain MR examination, and a detailed neuropsychological examination. Results: The sizes of the hippocampus, the entorhinal cortex and the amygdala were decreased in aMCI relative to naMCI and to controls. Furthermore the cortical thickness of the entorhinal cortex, the fusiform gyrus, the precuneus and the isthmus of the cingulate gyrus were significantly decreased in aMCI relative to naMCI and healthy controls. The largest differences relative to controls were detected for the volume of the hippocampus (18\% decrease vs. controls) and the cortical thickness (20\% decrease vs. controls) of the entorhinal cortex: 1.6 and 1.4 in terms of Cohen’s d. Only the volume of the precuneus were decreased in the naMCI group (5\% decrease) compared to the control subjects: 0.9 in terms of Cohen’s d. Significant between group differences were also found in the neuropsychological test results: a decreased anterograde, retrograde memory, and category fluency performance was detected in the aMCI group relative to controls and naMCI subjects. Subjects with naMCI showed decreased letter fluency relative to controls, while both MCI groups showed decreased executive functioning relative to controls as measured by the Trail Making test part B. Memory performance in the aMCI group and in the entire sample correlated with the thickness of the entorhinal cortex and with the volume of the amygdala. Conclusion: The amnestic mild cognitive impairment/non-amnestic mild cognitive impairment separation is not only theoretical but backed by structural imaging methods and neuropsychological tests. A better knowledge of the MCI subtypes can help to predict the direction of progression and create targeted prevention.}, + langid = {english}, + file = {/home/src/Offline/Papers/csukly et al_2016_the differentiation of amnestic type mci from the non-amnestic types by.pdf} +} + +@online{cuebiqMobilityInsightsCuebiq2021, + title = {Mobility {{Insights}} - {{Cuebiq}}}, + author = {{Cuebiq}}, + date = {2021-06-08}, + url = {https://www.cuebiq.com/visitation-insights-covid19/?utm_source=nyt&utm_medium=article&utm_campaign=organic}, + urldate = {2021-06-08} +} + +@article{currie2009social, + title = {Social Determinants of Health and Well-Being among Young People}, + author = {Currie, Candace and Zanotti, Cara and Morgan, Antony and Currie, Dorothy and De Looze, Margaretha and Roberts, Chris and Samdal, Oddrun and Smith, Otto RF and Barnekow, Vivian}, + date = {2009}, + journaltitle = {Health Behaviour in School-aged Children (HBSC) study: international report from the}, + shortjournal = {Health Behav. Sch.-Aged Child. HBSC Study Int. Rep. From}, + volume = {2010}, + pages = {271} +} + +@incollection{cutterSocialVulnerabilityEnvironmental2012, + title = {Social Vulnerability to Environmental Hazards}, + booktitle = {Hazards Vulnerability and Environmental Justice}, + author = {Cutter, Susan L. and Boruff, Bryan J. and Shirley, W. Lynn}, + date = {2012}, + pages = {143--160}, + publisher = {{Routledge}}, + isbn = {1-84977-154-5} +} + +@online{dagostinoArchitectModernAlgorithms, + title = {The {{Architect}} of {{Modern Algorithms}}}, + author = {D'Agostino, Susan}, + url = {https://www.quantamagazine.org/barbara-liskov-is-the-architect-of-modern-algorithms-20191120/}, + urldate = {2020-04-18}, + abstract = {Barbara Liskov pioneered the modern approach to writing code. She warns that the challenges facing computer science today can’t be overcome with good design}, + langid = {english}, + organization = {{Quanta Magazine}}, + file = {/home/cedarprince/Zotero/storage/7M7DQV2W/barbara-liskov-is-the-architect-of-modern-algorithms-20191120.html} +} + +@book{dalrympleLifeBottomWorldview2006, + title = {Life at the Bottom: The Worldview That Makes the Underclass}, + shorttitle = {Life at the Bottom}, + author = {Dalrymple, Theodore}, + date = {2006}, + publisher = {{Ivan R. Dee}}, + location = {{Chicago}}, + isbn = {978-1-56663-505-9}, + langid = {english}, + annotation = {OCLC: 751025017}, + file = {/home/src/Papers/dalrymple_2006_life at the bottom.pdf} +} + +@book{daniels2007just, + title = {Just Health: Meeting Health Needs Fairly}, + author = {Daniels, Norman}, + date = {2007}, + publisher = {{Cambridge University Press}} +} + +@book{daniels2008setting, + title = {Setting Limits Fairly: Learning to Share Resources for Health}, + author = {Daniels, Norman and Sabin, James E}, + date = {2008}, + publisher = {{Oxford University Press}} +} + +@article{danielsBarriersPrenatalCare2006, + title = {Barriers to Prenatal Care among {{Black}} Women of Low Socioeconomic Status}, + author = {Daniels, Pamela and Noe, Godfrey Fuji and Mayberry, Robert}, + year = {2006 Mar-Apr}, + journaltitle = {American Journal of Health Behavior}, + shortjournal = {Am J Health Behav}, + volume = {30}, + number = {2}, + eprint = {16533103}, + eprinttype = {pmid}, + pages = {188--198}, + issn = {1087-3244}, + doi = {10.5555/ajhb.2006.30.2.188}, + abstract = {OBJECTIVE: To qualitatively identify attitudinal and psychosocial determinants of early prenatal care among Black women of low socioeconomic status (SES). METHODS: Focus group discussions were conducted among Black women who attended community clinics for prenatal care. RESULTS: Early initiators of prenatal care, compared with late initiators, had positive attitudes toward pregnancy, were knowledgeable about pregnancy signs/symptoms, and thought prenatal care was important. All participants indicated strong social support during pregnancy. Late initiators, particularly multiparous women, perceived clinic staff to be insensitive. CONCLUSIONS: Findings provide valuable insight into overcoming barriers to early initiation of prenatal care among low SES Black women.}, + langid = {english}, + keywords = {Adolescent,Adult,African Americans,african-american,Attitude to Health,Demography,discrimination,Female,Health Behavior,Humans,LMICs,Prenatal Care,race,Socioeconomic Factors,us,women} +} + +@article{danquah2019use, + title = {Use of a Mobile Application for {{Ebola}} Contact Tracing and Monitoring in Northern {{Sierra Leone}}: A Proof-of-Concept Study}, + author = {Danquah, Lisa O and Hasham, Nadia and MacFarlane, Matthew and Conteh, Fatu E and Momoh, Fatoma and Tedesco, Andrew A and Jambai, Amara and Ross, David A and Weiss, Helen A}, + date = {2019}, + journaltitle = {BMC infectious diseases}, + shortjournal = {BMC Infect. Dis.}, + volume = {19}, + number = {1}, + pages = {810}, + publisher = {{Springer}} +} + +@inreference{DatabaseSchema2021, + title = {Database Schema}, + booktitle = {Wikipedia}, + date = {2021-12-19T20:14:09Z}, + url = {https://en.wikipedia.org/w/index.php?title=Database_schema&oldid=1061124043}, + urldate = {2022-02-19}, + abstract = {The database schema is its structure described in a formal language supported by the database management system (DBMS). The term "schema" refers to the organization of data as a blueprint of how the database is constructed (divided into database tables in the case of relational databases). The formal definition of a database schema is a set of formulas (sentences) called integrity constraints imposed on a database. These integrity constraints ensure compatibility between parts of the schema. All constraints are expressible in the same language. A database can be considered a structure in realization of the database language. The states of a created conceptual schema are transformed into an explicit mapping, the database schema. This describes how real-world entities are modeled in the database. "A database schema specifies, based on the database administrator's knowledge of possible applications, the facts that can enter the database, or those of interest to the possible end-users." The notion of a database schema plays the same role as the notion of theory in predicate calculus. A model of this "theory" closely corresponds to a database, which can be seen at any instant of time as a mathematical object. Thus a schema can contain formulas representing integrity constraints specifically for an application and the constraints specifically for a type of database, all expressed in the same database language. In a relational database, the schema defines the tables, fields, relationships, views, indexes, packages, procedures, functions, queues, triggers, types, sequences, materialized views, synonyms, database links, directories, XML schemas, and other elements. A database generally stores its schema in a data dictionary. Although a schema is defined in text database language, the term is often used to refer to a graphical depiction of the database structure. In other words, schema is the structure of the database that defines the objects in the database. In an Oracle Database system, the term "schema" has a slightly different connotation.}, + langid = {english}, + annotation = {Page Version ID: 1061124043}, + file = {/home/cedarprince/Zotero/storage/PR7IRAX3/Database_schema.html} +} + +@book{davidspivakCategoryTheoryScientists2013, + title = {Category {{Theory}} for {{Scientists}}}, + author = {{David Spivak}}, + date = {2013-09-19}, + edition = {Old Version}, + file = {/home/src/Papers/David Spivak_2013_Category Theory for Scientists.pdf} +} + +@book{davies1982psychology, + title = {The Psychology of Vigilance}, + author = {Davies, David Roy and Parasuraman, Raja}, + date = {1982}, + publisher = {{Academic Pr}} +} + +@article{dawson2017electrodermal, + title = {The Electrodermal System.}, + author = {Dawson, Michael E and Schell, Anne M and Filion, Diane L}, + date = {2017}, + publisher = {{Cambridge University Press}} +} + +@inproceedings{de2014seeking, + title = {Seeking and Sharing Health Information Online: Comparing Search Engines and Social Media}, + booktitle = {Proceedings of the {{SIGCHI}} Conference on Human Factors in Computing Systems}, + author = {De Choudhury, Munmun and Morris, Meredith Ringel and White, Ryen W}, + date = {2014}, + pages = {1365--1376} +} + +@article{decampEthicalObligationsRegarding2018, + title = {Ethical {{Obligations Regarding Short-Term Global Health Clinical Experiences}}: {{An American College}} of {{Physicians Position Paper}}}, + shorttitle = {Ethical {{Obligations Regarding Short-Term Global Health Clinical Experiences}}}, + author = {DeCamp, Matthew and Lehmann, Lisa Soleymani and Jaeel, Pooja and Horwitch, Carrie and {for the ACP Ethics, Professionalism and Human Rights Committee}}, + date = {2018-05-01}, + journaltitle = {Annals of Internal Medicine}, + shortjournal = {Ann Intern Med}, + volume = {168}, + number = {9}, + pages = {651}, + issn = {0003-4819}, + doi = {10.7326/M17-3361}, + langid = {english}, + file = {/home/src/Offline/Papers/decamp et al_2018_ethical obligations regarding short-term global health clinical experiences.pdf} +} + +@article{deckerJihadHow1002015, + title = {“{{I}}’m down for a {{Jihad}}”: {{How}} 100 {{Years}} of {{Gang Research Can Inform}} the {{Study}} of {{Terrorism}}, {{Radicalization}} and {{Extremism}}}, + author = {Decker, Scott H and Pyrooz, David C}, + date = {2015}, + volume = {9}, + number = {1}, + pages = {10}, + langid = {english}, + file = {/home/src/Papers/decker_pyrooz_2015_“i’m down for a jihad”.pdf} +} + +@article{dehertPhysicalIllnessPatients2011, + title = {Physical Illness in Patients with Severe Mental Disorders. {{I}}. {{Prevalence}}, Impact of Medications and Disparities in Health Care}, + author = {De Hert, Marc and Correll, Christoph U. and Bobes, Julio and Cetkovich-Bakmas, Marcelo and Cohen, D. A. N. and Asai, Itsuo and Detraux, Johan and Gautam, Shiv and Möller, Hans-Jurgen and Ndetei, David M.}, + date = {2011}, + journaltitle = {World psychiatry}, + volume = {10}, + number = {1}, + pages = {52}, + publisher = {{World Psychiatric Association}} +} + +@article{delorme2004eeglab, + title = {{{EEGLAB}}: An Open Source Toolbox for Analysis of Single-Trial {{EEG}} Dynamics Including Independent Component Analysis}, + author = {Delorme, Arnaud and Makeig, Scott}, + date = {2004}, + journaltitle = {Journal of neuroscience methods}, + shortjournal = {J. Neurosci. Methods}, + volume = {134}, + number = {1}, + pages = {9--21}, + publisher = {{Elsevier}} +} + +@software{delormeGonogoCategorizationDetection2020, + title = {Go-Nogo Categorization and Detection Task}, + author = {Delorme, Arnaud and Fabre-Thorpe, Michele}, + date = {2020-04-02}, + url = {10.18112/openneuro.ds002680.v1.0.0}, + version = {1.0.0} +} + +@article{delormeSingletrialEEGBrain2002, + title = {From Single-Trial {{EEG}} to Brain Area Dynamics}, + author = {Delorme, A and Makeig, S and Fabre-Thorpe, M and Sejnowski, T}, + date = {2002-06}, + journaltitle = {Neurocomputing}, + shortjournal = {Neurocomputing}, + volume = {44--46}, + pages = {1057--1064}, + issn = {09252312}, + doi = {10.1016/S0925-2312(02)00415-0}, + abstract = {We here present a new technique for visualizing the temporal dynamics of brain area activation and interaction at high-temporal resolution. We ÿrst applied independent component analysis to concatenated single-trial EEG data from a fast go–nogo categorization task of natural images and showed that individual independent components might index neural synchrony within and between intracranial brain sources. We used time-frequency decomposition to model their dynamic interactions. In particular, following stimulus presentations, we showed that several independent components were activated and synchronized in the theta frequency range (near 4 Hz). c 2002 Elsevier Science B.V. All rights reserved.}, + langid = {english}, + file = {/home/src/Papers/delorme et al_2002_from single-trial eeg to brain area dynamics.pdf} +} + +@article{deming1940least, + title = {On a Least Squares Adjustment of a Sampled Frequency Table When the Expected Marginal Totals Are Known}, + author = {Deming, W Edwards and Stephan, Frederick F}, + date = {1940}, + journaltitle = {The Annals of Mathematical Statistics}, + shortjournal = {Ann. Math. Stat.}, + volume = {11}, + number = {4}, + pages = {427--444}, + publisher = {{JSTOR}} +} + +@inproceedings{demirkusPeopleDetectionFisheye2017, + title = {People {{Detection}} in {{Fish-eye Top-views}}:}, + shorttitle = {People {{Detection}} in {{Fish-eye Top-views}}}, + booktitle = {Proceedings of the 12th {{International Joint Conference}} on {{Computer Vision}}, {{Imaging}} and {{Computer Graphics Theory}} and {{Applications}}}, + author = {Demirkus, Meltem and Wang, Ling and Eschey, Michael and Kaestle, Herbert and Galasso, Fabio}, + date = {2017}, + pages = {141--148}, + publisher = {{SCITEPRESS - Science and Technology Publications}}, + location = {{Porto, Portugal}}, + doi = {10.5220/0006094701410148}, + abstract = {People Detection, Top View, Fish Eye Lens, ACF, Grid of Classifiers.}, + eventtitle = {International {{Conference}} on {{Computer Vision Theory}} and {{Applications}}}, + isbn = {978-989-758-225-7 978-989-758-226-4 978-989-758-227-1}, + langid = {english}, + file = {/home/src/Offline/Papers/demirkus et al_2017_people detection in fish-eye top-views.pdf} +} + +@article{dempsterCaseStudyFailure1988, + title = {A {{Case Study}} in the {{Failure}} to {{Apply}} the {{Results}} of {{Psychological Research}}}, + author = {Dempster, Frank N}, + date = {1988}, + journaltitle = {American Psychologist}, + shortjournal = {Am. Psychol.}, + pages = {8}, + abstract = {The spacing effect would appear to have considerable potential for improving classroom learning, yet there is no evidence of its widespread application. I consider nine possible impediments to the implementation of research findings in the classroom in an effort to determine which, if any, apply to the spacing effect. I conclude that the apparent absence o f systematic application may be due, in part, to the ahistorical character of research on the spacing effect and certain gaps in our understanding of both the spacing effect and classroom practice. However, because none of these concerns seems especially discouraging, and in view of what we do know about the spacing effect, classroom application is recommended.}, + langid = {english}, + file = {/home/src/Offline/Papers/dempster_1988_a case study in the failure to apply the results of psychological research.pdf} +} + +@report{departmentofdefenseofficeofinspectorgeneralEvaluationAccessMental2020, + title = {Evaluation of {{Access}} to {{Mental Health Care}} in the {{Department}} of {{Defense}} ({{DODIG-2020-112}})}, + author = {{Department of Defense Office of Inspector General}}, + date = {2020-08-10}, + url = {https://www.dodig.mil/reports.html/Article/2309785/evaluation-of-access-to-mental-health-care-in-the-department-of-defense-dodig-2/}, + urldate = {2021-05-20} +} + +@article{depino2013peripheral, + title = {Peripheral and Central Inflammation in Autism Spectrum Disorders}, + author = {Depino, Amaicha Mara}, + date = {2013}, + journaltitle = {Molecular and Cellular Neuroscience}, + shortjournal = {Mol. Cell. Neurosci.}, + volume = {53}, + pages = {69--76}, + publisher = {{Elsevier}} +} + +@article{depino2013peripheral, + title = {Peripheral and Central Inflammation in Autism Spectrum Disorders}, + author = {Depino, Amaicha Mara}, + date = {2013}, + journaltitle = {Molecular and Cellular Neuroscience}, + shortjournal = {Mol. Cell. Neurosci.}, + volume = {53}, + pages = {69--76}, + publisher = {{Elsevier}} +} + +@article{desai2004tomayto, + title = {Tomayto Tomahto: The Research Supply Chain and the Ethics of Knowledge Production}, + author = {Desai, Deval and Tapscott, Rebecca}, + date = {2004}, + journaltitle = {Humanity Journal Online}, + shortjournal = {Humanity J. Online} +} + +@article{desousalimaCouldAutismSpectrum2020, + title = {Could {{Autism Spectrum Disorders}} Be a {{Risk Factor}} for {{COVID-19}}?}, + author = {de Sousa Lima, Matheus Eugênio and Barros, Levi Coelho Maia and Aragão, Gislei Frota}, + options = {useprefix=true}, + date = {2020-05-30}, + journaltitle = {Medical Hypotheses}, + shortjournal = {Med Hypotheses}, + eprint = {32505067}, + eprinttype = {pmid}, + issn = {0306-9877}, + doi = {10.1016/j.mehy.2020.109899}, + abstract = {The coronavirus SARS-CoV-2 pandemia is infecting millions of people and some studies relate conditions that might increase the risk of developing a fatal course for the disease, such as diabetes, cardiovascular diseases and obesity. In COVID-19 physiopathology, one of the main inflammation mechanisms is the “cytokine storm”, causing a pro-inflammatory state, related to cardiac and pulmonary damage. There is also a less effective role of lymphocyte B and T in the humoral immunity due to the reduction of their proliferative response. The physiopathology of ASD (Autism Spectrum Disorder) involves several modifications at the genetic and at the immune level, such as the increase of inflammatory cytokines and abnormal immune response in several levels. We hypothesize that ASD could be a risk-factor as the other conditions are.}, + pmcid = {PMC7261065}, + file = {/home/src/Papers/de sousa lima et al_2020_could autism spectrum disorders be a risk factor for covid-19.pdf} +} + +@article{devanand2002adverse, + title = {Adverse Life Events in Elderly Patients with Major Depression or Dysthymic Disorder and in Healthy-Control Subjects}, + author = {Devanand, DP and Kim, Min Kyung and Paykina, Natalya and Sackeim, Harold A}, + date = {2002}, + journaltitle = {The American journal of geriatric psychiatry}, + shortjournal = {Am. J. Geriatr. Psychiatry}, + volume = {10}, + number = {3}, + pages = {265--274}, + publisher = {{Elsevier}}, + keywords = {\#nosource} +} + +@article{dhabharHassleDayMay2009, + title = {A Hassle a Day May Keep the Pathogens Away: {{The}} Fight-or-Flight Stress Response and the Augmentation of Immune Function}, + shorttitle = {A Hassle a Day May Keep the Pathogens Away}, + author = {Dhabhar, F. S.}, + date = {2009-09-01}, + journaltitle = {Integrative and Comparative Biology}, + shortjournal = {Integrative and Comparative Biology}, + volume = {49}, + number = {3}, + pages = {215--236}, + issn = {1540-7063, 1557-7023}, + doi = {10.1093/icb/icp045}, + langid = {english}, + file = {/home/src/Offline/Papers/dhabhar_2009_a hassle a day may keep the pathogens away.pdf} +} + +@incollection{dietterichEnsembleMethodsMachine2000, + title = {Ensemble {{Methods}} in {{Machine Learning}}}, + booktitle = {Multiple {{Classifier Systems}}}, + author = {Dietterich, Thomas G.}, + options = {useprefix=true}, + date = {2000}, + volume = {1857}, + pages = {1--15}, + publisher = {{Springer Berlin Heidelberg}}, + location = {{Berlin, Heidelberg}}, + doi = {10.1007/3-540-45014-9_1}, + abstract = {Ensemble methods are learning algorithms that construct a set of classi ers and then classify new data points by taking a (weighted) vote of their predictions. The original ensemble method is Bayesian averaging, but more recent algorithms include error-correcting output coding, Bagging, and boosting. This paper reviews these methods and explains why ensembles can often perform better than any single classi er. Some previous studies comparing ensemble methods are reviewed, and some new experiments are presented to uncover the reasons that Adaboost does not over t rapidly.}, + editorb = {Goos, Gerhard and Hartmanis, Juris and van Leeuwen, Jan}, + editorbtype = {redactor}, + isbn = {978-3-540-67704-8 978-3-540-45014-6}, + langid = {english}, + file = {/home/src/Offline/Papers/dietterich_2000_ensemble methods in machine learning.pdf} +} + +@article{diguiseppi2010screening, + title = {Screening for Autism Spectrum Disorders in Children with {{Down}} Syndrome: Population Prevalence and Screening Test Characteristics}, + author = {DiGuiseppi, Carolyn and Hepburn, Susan and Davis, Jonathan M and Fidler, Deborah J and Hartway, Sara and Lee, Nancy Raitano and Miller, Lisa and Ruttenber, Margaret and Robinson, Cordelia}, + date = {2010}, + journaltitle = {Journal of developmental and behavioral pediatrics: JDBP}, + shortjournal = {J. Dev. Behav. Pediatr. JDBP}, + volume = {31}, + number = {3}, + pages = {181}, + publisher = {{NIH Public Access}} +} + +@article{dillonBehavioralSymptomsRelated2013, + title = {Behavioral Symptoms Related to Cognitive Impairment}, + author = {Dillon, Carol and {Serrano} and {Castro} and {Heisecke} and {Taragano} and Perez Leguizamon, Patricio}, + date = {2013-09}, + journaltitle = {Neuropsychiatric Disease and Treatment}, + shortjournal = {NDT}, + pages = {1443}, + issn = {1176-6328}, + doi = {10.2147/NDT.S47133}, + abstract = {Neuropsychiatric symptoms (NPS) are core features of Alzheimer’s disease and related dementias. On one hand, behavioral symptoms in patients with mild cognitive impairment (MCI) can indicate an increased risk of progressing to dementia. On the other hand, mild behavioral impairment (MBI) in patients who usually have normal cognition indicates an increased risk of developing dementia. Whatever the cause, all dementias carry a high rate of NPI. These symptoms can be observed at any stage of the disease, may fluctuate over its course, are a leading cause of stress and overload for caregivers, and increase rates of hospitalization and early institutionalization for patients with dementia. The clinician should be able to promptly recognize NPI through the use of instruments capable of measuring their frequency and severity to support diagnosis, and to help monitor the treatment of behavioral symptoms. The aims of this review are to describe and update the construct ‘MBI’ and to revise the reported NPS related to prodromal stages of dementia (MCI and MBI) and dementia stages of Alzheimer’s disease and frontotemporal lobar degeneration.}, + langid = {english}, + file = {/home/src/Offline/Papers/dillon et al_2013_behavioral symptoms related to cognitive impairment.pdf} +} + +@article{dinesenViolenceSocialCapital2013, + title = {Violence and Social Capital in Post-Conflict {{Guatemala}}}, + author = {Dinesen, Cecilie and Ronsbo, Henrik and Juárez, Carla and González, Mariano and Méndez, Miguel Ángel Estrada and Modvig, Jens}, + date = {2013}, + journaltitle = {Rev Panam Salud Publica}, + pages = {8}, + abstract = {Objective.{$\quad$} Violence in post-conflict Guatemala has serious public health consequences for the population. The objective of this study was to assess the relationship between violence and social capital. 
 Methods.{$\quad$} Data from a cross-sectional victimization survey conducted in 2008–2010 in Guatemala were analyzed. Two-stage proportionate sampling was used in the survey. Households (n = 1 300) were randomly sampled within a random sample of communities (n = 118) in five administrative departments. The survey collected information on the six-month violence exposure of 6 335 individuals. Social capital was measured at the household level using the short version of the Adapted Social Capital Tool (SASCAT). The odds ratio for household violence exposure was estimated using multiple logistic regression. Community-level data from the latest national census were included as explanatory factors at the community level. Income, ethnicity, and social capital were included at the household level. Data were analyzed using SPSS 18.0. 
 Results.{$\quad$} In total, 2.7\% of individuals and 11.7\% of households had been exposed to violence within the past six months. The multivariate analysis showed that 1) structural social capital (in this case, the level of participation in social networks and civil society) was a risk factor for violence and 2) cognitive social capital (measured as trust, norms, and sense of belonging) was a protective factor for violence. 
 Conclusions.{$\quad$} The opposite direction of the association between violence and structural and cognitive social capital challenges the use of social capital as a unified concept. If this finding is corroborated by other studies, structural and cognitive social capital will have to be treated as two distinctly different concepts.}, + langid = {english}, + file = {/home/src/Offline/Papers/dinesen et al_2013_violence and social capital in post-conflict guatemala.pdf} +} + +@misc{doarn2014telemedicine, + title = {Telemedicine and E-Health in Disaster Response}, + author = {Doarn, Charles R and Merrell, Ronald C}, + date = {2014}, + volume = {20}, + number = {7}, + pages = {605--606}, + publisher = {{Mary Ann Liebert, Inc. 140 Huguenot Street, 3rd Floor New Rochelle, NY 10801 USA}} +} + +@article{dongInteractiveWebbasedDashboard2020, + title = {An Interactive Web-Based Dashboard to Track {{COVID-19}} in Real Time}, + author = {Dong, Ensheng and Du, Hongru and Gardner, Lauren}, + date = {2020-02-19}, + journaltitle = {The Lancet Infectious Diseases}, + shortjournal = {The Lancet Infectious Diseases}, + volume = {0}, + number = {0}, + eprint = {32087114}, + eprinttype = {pmid}, + publisher = {{Elsevier}}, + issn = {1473-3099, 1474-4457}, + doi = {10.1016/S1473-3099(20)30120-1}, + abstract = {In December, 2019, a local outbreak of pneumonia of initially unknown cause was detected in Wuhan (Hubei, China), and was quickly determined to be caused by a novel coronavirus,1 namely severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The outbreak has since spread to every province of mainland China as well as 27 other countries and regions, with more than 70\hphantom{,}000 confirmed cases as of Feb 17, 2020.2 In response to this ongoing public health emergency, we developed an online interactive dashboard, hosted by the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University, Baltimore, MD, USA, to visualise and track reported cases of coronavirus disease 2019 (COVID-19) in real time.}, + langid = {english}, + file = {/home/src/Offline/Papers/dong et al_2020_an interactive web-based dashboard to track covid-19 in real time.pdf;/home/cedarprince/Zotero/storage/JGMJYCSR/fulltext.html} +} + +@article{dorseyStateTelehealth2016, + title = {State of {{Telehealth}}}, + author = {Dorsey, E. Ray and Topol, Eric J.}, + editor = {Campion, Edward W.}, + date = {2016-07-14}, + journaltitle = {New England Journal of Medicine}, + shortjournal = {N Engl J Med}, + volume = {375}, + number = {2}, + pages = {154--161}, + issn = {0028-4793, 1533-4406}, + doi = {10.1056/NEJMra1601705}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Dorsey_Topol_2016_State of Telehealth.pdf} +} + +@article{dosokyEfficiencySilverNanoparticles2015, + title = {Efficiency of Silver Nanoparticles against Bacterial Contaminants Isolated from Surface and Ground Water in {{Egypt}}.}, + author = {Dosoky, Reem and Kotb, Saber and Farghali, Mohamed}, + date = {2015-06}, + journaltitle = {Journal of Advanced Veterinary \& Animal Research}, + shortjournal = {Journal of Advanced Veterinary \& Animal Research}, + volume = {2}, + number = {2}, + pages = {175--184}, + issn = {23117710}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=a9h&AN=108400742&site=eds-live&scope=site}, + abstract = {The bactericidal efficiency of silver nanoparticles (AgNP) was evaluated against bacteria isolated from surface and ground water samples in Egypt. The AgNP were synthesized by typical one-step synthesis protocol, and were characterized using transmission electron microscopy and atomic absorption spectrophotometer. The bactericidal efficiency of AgNP was evaluated by its application in three concentrations i.e., 0.1, 0.05 and 0.01 ppm to water sample, and allowed to interact with bacteria for different duration e.g., 5 min 15 min, 30 min, 1 h and 2 h. Then, the bactericidal efficiency of AgNPs was determined by comparing the counted bacteria before and after the treatments. Higher mean values of total bacterial count (TBC), total coliform count (TCC), and total streptococcal count (TFS) were detected in surface water than in ground water. Also, the results showed that TBC, TCC and TFS exceeded permissible limits. Application of AgNP at different concentration, the number of bacteria in TBC was significantly reduced in all AgNP-exposed samples as compared to the control group (p{$<$}0.05). The highest concentration of AgNP exhibited highest bactericidal efficiency in TBC, where, after two hours, 0.1, 0.05 and 0.01 mg/L AgNP was found to be sufficient to inhibit 91.85, 89.14 and 74.92\%, and 92.33, 85.23 and 53.17\% in TBC of surface and ground water, respectively. Moreover, the inhibition efficiency of the highest concentration (0.1 ppm) against TCC reached to 98.10 and 99.88\% in surface water and 95.54 and 99.20\% in ground water after 1 h and 2 h, respectively. Similar results were found against TFS count. The AgNPs were found to be effective against bacteria of water origin. [ABSTRACT FROM AUTHOR]}, + keywords = {\#nosource,AgNP,Bacterial contaminant,BACTERIAL pollution of water,BACTERICIDAL action,Efficiency,EGYPT,Ground water,GROUNDWATER,PREVENTION,SILVER nanoparticles,SPECTROPHOTOMETERS,Surface water} +} + +@article{durkin2008advanced, + title = {Advanced Parental Age and the Risk of Autism Spectrum Disorder}, + author = {Durkin, Maureen S and Maenner, Matthew J and Newschaffer, Craig J and Lee, Li-Ching and Cunniff, Christopher M and Daniels, Julie L and Kirby, Russell S and Leavitt, Lewis and Miller, Lisa and Zahorodny, Walter and others}, + date = {2008}, + journaltitle = {American journal of epidemiology}, + shortjournal = {Am. J. Epidemiol.}, + volume = {168}, + number = {11}, + pages = {1268--1276}, + publisher = {{Oxford University Press}} +} + +@online{E4Wristband, + title = {E4 Wristband}, + url = {https://store.empatica.com/products/e4-wristband}, + urldate = {2020-04-26}, + abstract = {The most comfortable and accurate wristband to monitor physiological signals in real-time. Continuous electrodermal activity on your wrist. Order Today!}, + organization = {{Empatica Store}}, + file = {/home/cedarprince/Zotero/storage/L2XXINFW/e4-wristband.html} +} + +@article{ebbinghaus1885ueber, + title = {Ueber Das Gedächtnis}, + author = {Ebbinghaus, Herm}, + date = {1885} +} + +@online{editorsOpenWearablesInitiative, + title = {The {{Open Wearables Initiative Soliciting Algorithms}} and {{Datasets}}}, + author = {Editors, Applied Clinical Trials}, + url = {http://www.appliedclinicaltrialsonline.com/open-wearables-initiative-soliciting-algorithms-and-datasets-0}, + urldate = {2020-03-10}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/CCMINIZ4/open-wearables-initiative-soliciting-algorithms-and-datasets-0.html} +} + +@report{edwardsLiteratureReviewEffects2002, + title = {A {{Literature Review}} of the {{Effects}} of {{Natural Light}} on {{Building Occupants}}}, + author = {Edwards, L and Torcellini, P}, + date = {2002}, + pages = {58}, + institution = {{National Renewable Energy Lab., Golden, CO. (US)}}, + langid = {english}, + file = {/home/src/Offline/Papers/edwards_torcellini_2002_a literature review of the effects of natural light on building occupants.pdf} +} + +@online{EmbraceWatchSmarter, + title = {Embrace {{Watch}} | {{Smarter Epilepsy Management}}}, + url = {https://www.empatica.com/}, + urldate = {2020-02-11}, + abstract = {Empatica designs and develops the most accurate devices for seizure monitoring and neurological research.}, + langid = {american}, + organization = {{Empatica}}, + file = {/home/cedarprince/Zotero/storage/SCKM587S/www.empatica.com.html} +} + +@online{Empatica510K, + title = {Empatica {{510K}}}, + url = {https://www.accessdata.fda.gov/cdrh_docs/pdf17/K172935.pdf}, + urldate = {2020-02-11}, + file = {/home/src/Offline/Papers/empatica 510k.pdf} +} + +@article{endo2020estimating, + title = {Estimating the Overdispersion in {{COVID-19}} Transmission Using Outbreak Sizes Outside {{China}}}, + author = {Endo, Akira and Abbott, Sam and Kucharski, Adam J and Funk, Sebastian and others}, + date = {2020}, + journaltitle = {Wellcome Open Research}, + shortjournal = {Wellcome Open Res.}, + volume = {5}, + number = {67}, + pages = {67}, + publisher = {{F1000 Research Limited}} +} + +@article{endo2020estimating, + title = {Estimating the Overdispersion in {{COVID-19}} Transmission Using Outbreak Sizes Outside {{China}}}, + author = {Endo, Akira and Abbott, Sam and Kucharski, Adam J and Funk, Sebastian and others}, + date = {2020}, + journaltitle = {Wellcome Open Research}, + shortjournal = {Wellcome Open Res.}, + volume = {5}, + number = {67}, + pages = {67}, + publisher = {{F1000 Research Limited}} +} + +@book{epstein1985current, + title = {Current Perspectives in Dysphasia}, + author = {Epstein, Ruth and Newman, Stanton P}, + date = {1985}, + publisher = {{Churchill Livingstone}} +} + +@online{estimoteEstimoteN.D., + title = {Estimote}, + author = {{Estimote}}, + year = {N.D.}, + url = {http://estimote.com/}, + urldate = {2020-04-30}, + abstract = {Estimote — real world context for your apps.}, + file = {/home/cedarprince/Zotero/storage/YWXAZ35K/products.html} +} + +@software{Eunomia2021, + title = {Eunomia}, + date = {2021-04-17T22:07:52Z}, + origdate = {2019-02-06T10:46:22Z}, + url = {https://github.com/OHDSI/Eunomia}, + urldate = {2021-08-13}, + abstract = {A standard CDM dataset for testing and demonstration purposes.}, + organization = {{Observational Health Data Sciences and Informatics}}, + keywords = {hades} +} + +@online{EVALAD5933EvaluationBoard, + title = {{{EVAL-AD5933 Evaluation Board}} | {{Analog Devices}}}, + url = {https://www.analog.com/en/design-center/evaluation-hardware-and-software/evaluation-boards-kits/eval-ad5933.html#eb-overview}, + urldate = {2020-04-27}, + file = {/home/cedarprince/Zotero/storage/RY2BGYIG/eval-ad5933.html} +} + +@online{EvaluationAccessMental, + title = {Evaluation of {{Access}} to {{Mental Health Care}} in the {{Department}} of {{Defense}} ({{DODIG-2020-112}}) {$>$} {{Department}} of {{Defense Office}} of {{Inspector General}} {$>$} {{DoD OIG Reports}}}, + url = {https://www.dodig.mil/reports.html/Article/2309785/evaluation-of-access-to-mental-health-care-in-the-department-of-defense-dodig-2/}, + urldate = {2021-05-16}, + file = {/home/cedarprince/Zotero/storage/CTZAMY2S/evaluation-of-access-to-mental-health-care-in-the-department-of-defense-dodig-2.html} +} + +@online{ExRxNetBody, + title = {{{ExRx}}.Net : {{Body Segment Data}}}, + url = {https://exrx.net/Kinesiology/Segments}, + urldate = {2020-04-27}, + file = {/home/cedarprince/Zotero/storage/AQA5DXJ7/Segments.html} +} + +@video{exxonmobilCleanWater16, + title = {Clean Water, a \$16 Solution: {{Marvels}} of Engineering}, + shorttitle = {Clean Water, a \$16 Solution}, + editor = {{ExxonMobil}}, + url = {https://www.youtube.com/watch?v=HOZhPAUQNYc}, + urldate = {2015-11-14}, + abstract = {Could there be a \$16 answer to the global challenge of clean drinking water? CNN's Rachel Crane explains. Build Tomorrow is a dedicated to celebrating engineers and their innovations making our lives better each day. The tools and creativity of modern engineering are expanding in life-changing ways. To learn more about Build Tomorrow - Marvels of Engineering, visit: http://cnn.com/interactive/2014/09/sp... To learn more about ExxonMobil, visit: http://exxonmobil.com}, + editortype = {director}, + keywords = {\#nosource,Africa,Aluminum,Bioengineers,Clean,Clean Water,Clean Water Solutions,CNN,Communities,Crusteceans,Dr. Pradeep,Drinking Water (Product Ingredient),Electronics,Engineering,Exxon,Exxon Mobil Corporation,ExxonMobil,ExxonMobile,Filter,Filtration System,India,India Institute of Technology,Innovation,Mobil,nanotechnology,oxidized,Scientists,silver ions,Silver nano particles,Thalappil Pradeep,Water (Chemical Compound),Water Sources} +} + +@article{fabre2001limit, + title = {A Limit to the Speed of Processing in Ultra-Rapid Visual Categorization of Novel Natural Scenes}, + author = {Fabre-Thorpe, Michèle and Delorme, Arnaud and Marlot, Catherine and Thorpe, Simon}, + date = {2001}, + journaltitle = {Journal of cognitive neuroscience}, + shortjournal = {J. Cogn. Neurosci.}, + volume = {13}, + number = {2}, + pages = {171--180}, + publisher = {{MIT Press}} +} + +@article{fahn1987unified, + title = {Unified Parkinson's Disease Rating Scale, in: s. Fahn, {{CD}}. Marsden, {{DB}}. Calne, m. Goldstein, Recent Developments in Parkinson's Disease}, + author = {Fahn, SERL}, + date = {1987}, + journaltitle = {Macmillan Health Care Information}, + shortjournal = {Macmillan Health Care Inf.}, + volume = {2}, + pages = {153--163}, + keywords = {\#nosource} +} + +@article{farmerAnthropologyStructuralViolence2004, + title = {An {{Anthropology}} of {{Structural Violence}}}, + author = {Farmer, Paul}, + date = {2004-06}, + journaltitle = {Current Anthropology}, + shortjournal = {Current Anthropology}, + volume = {45}, + number = {3}, + pages = {305--325}, + issn = {0011-3204, 1537-5382}, + doi = {10.1086/382250}, + langid = {english}, + file = {/home/src/Offline/Papers/farmer_2004_an anthropology of structural violence.pdf} +} + +@online{fastTaleComplexityStructural2018, + title = {A {{Tale}} of {{Complexity}} – {{Structural Layers}} in {{Note Taking}}}, + author = {Fast, Sascha}, + date = {2018-03-27}, + url = {https://www.zettelkasten.de/posts/three-layers-structure-zettelkasten/}, + urldate = {2020-07-05}, + abstract = {A Zettelkasten is a personal tool for thinking and writing that creates an interconnected web of thought. Its emphasis is on connection and not mere collection of ideas.}, + langid = {english}, + organization = {{Zettelkasten Method}}, + file = {/home/cedarprince/Zotero/storage/JE48PU3J/three-layers-structure-zettelkasten.html} +} + +@inproceedings{fathimaLowcostPerinatalMonitoring2014, + title = {A Low-Cost Perinatal Monitoring System for Use in Rural {{Guatemala}}}, + booktitle = {Appropriate {{Healthcare Technologies}} for {{Low Resource Settings}} ({{AHT}} 2014)}, + author = {Fathima, S. and Rohloff, P. and King, N.E. and Hall-Clifford, R. and Stroux, L. and Clifford, G.D.}, + date = {2014}, + pages = {17--17}, + publisher = {{Institution of Engineering and Technology}}, + location = {{London, UK}}, + doi = {10.1049/cp.2014.0777}, + abstract = {While advances in medical care have reduced mortality rates across the globe, perinatal mortality has decreased at a slower pace. This is particularly true of low- and middle-income countries, which contribute by far the largest proportion of perinatal deaths annually. Key reasons for this include lack of systematic screening, lack of early health advice-seeking and robust referral. To address these issues we are developing a scalable mHealth referral system embedded into an existing network of practising traditional birth attendants. Two off-theshelf sensors are bundled into the intervention, a 1D Doppler foetal heart monitor (cost \$35) and a pulse oximeter, to address key clinical perinatal complications: the detection of foetal distress and intrauterine growth restriction by automatic algorithmic analysis of the Doppler ultrasound signal. The devices directly interface with the smartphone for data transfer and to enable on-the-spot assessment. For the development of our system we partnered with a local healthcare NGO working in rural Guatemala, one of the poorest regions in Latin America. For the first time, the systemic barriers to maternal-child care posed by the acute lack of access to basic diagnostic technology, decision support, and reliable linkages between lay birth attendants and higher levels of care will be addressed. An initial usability study has been conducted to assess the feasibility of introducing the proposed system for use by frontline health care workers. The high rate of successful signal recordings and the positive feedback on system use and utility are encouraging indicators that, by bringing together engineers, physicians, public health workers, anthropologists, and local NGOs, we are developing an intuitive system capable in assisting practicing birth attendants to elevate the level of services they provide.}, + eventtitle = {Appropriate {{Healthcare Technologies}} for {{Low Resource Settings}} ({{AHT}} 2014)}, + isbn = {978-1-84919-915-5}, + langid = {english}, + keywords = {cliffordlab}, + file = {/home/src/Offline/Papers/fathima et al_2014_a low-cost perinatal monitoring system for use in rural guatemala.pdf} +} + +@article{favazza1993diagnostic, + title = {Diagnostic Issues in Self-Mutilation}, + author = {Favazza, Armando R and Rosenthal, Richard J}, + date = {1993}, + journaltitle = {Psychiatric Services}, + shortjournal = {Psychiatr. Serv.}, + volume = {44}, + number = {2}, + pages = {134--140}, + publisher = {{Am Psychiatric Assoc}} +} + +@article{favazza1998coming, + title = {The Coming of Age of Self-Mutilation}, + author = {Favazza, Armando R}, + date = {1998}, + journaltitle = {The Journal of nervous and mental disease}, + shortjournal = {J. Nerv. Ment. Dis.}, + volume = {186}, + number = {5}, + pages = {259--268}, + publisher = {{LWW}} +} + +@article{feinsteinVoterPrivacyAct2019, + title = {Voter {{Privacy Act}} of 2019}, + author = {Feinstein, Dianne}, + date = {2019}, + pages = {31}, + langid = {english}, + file = {/home/src/Offline/Papers/feinstein_2019_voter privacy act of 2019.pdf} +} + +@article{feng2010cognitive, + title = {Cognitive Function and Tea Consumption in Community Dwelling Older {{Chinese}} in {{Singapore}}}, + author = {Feng, Lei and Gwee, XINYI and Kua, E-H and Ng, T-P}, + date = {2010}, + journaltitle = {The journal of nutrition, health \& aging}, + shortjournal = {J. Nutr. Health Aging}, + volume = {14}, + number = {6}, + pages = {433--438}, + publisher = {{Springer}}, + keywords = {\#nosource} +} + +@article{fengMechanisticStudyAntibacterial2000, + title = {A Mechanistic Study of the Antibacterial Effect of Silver Ions on {{Escherichia}} Coli and {{Staphylococcus}} Aureus}, + author = {Feng, Q. L. and Wu, J. and Chen, G. Q. and Cui, F. Z. and Kim, T. N. and Kim, J. O.}, + date = {2000-12-15}, + journaltitle = {Journal of Biomedical Materials Research}, + shortjournal = {J. Biomed. Mater. Res.}, + volume = {52}, + number = {4}, + pages = {662--668}, + issn = {1097-4636}, + doi = {10.1002/1097-4636(20001215)52:4<662::AID-JBM10>3.0.CO;2-3}, + keywords = {\#nosource,antibacterial mechanism,DNA molecule,morphological changes,silver ions,transmission electron microscopy} +} + +@article{fengMetabolicSyndromeAmnestic2013, + title = {Metabolic {{Syndrome}} and {{Amnestic Mild Cognitive Impairment}}: {{Singapore Longitudinal Ageing Study-2 Findings}}}, + shorttitle = {Metabolic {{Syndrome}} and {{Amnestic Mild Cognitive Impairment}}}, + author = {Feng, Liang and Chong, Mei Sian and Lim, Wee Shiong and Lee, Tih Shih and Collinson, Simon L and Yap, Philip and Ng, Tze Pin}, + date = {2013-03-04}, + journaltitle = {Journal of Alzheimer's Disease}, + shortjournal = {JAD}, + volume = {34}, + number = {3}, + pages = {649--657}, + issn = {18758908, 13872877}, + doi = {10.3233/JAD-121885}, + abstract = {Metabolic syndrome (MetS) is reported to be associated with cognitive decline and dementia, in particular vascular dementia. However, the evidence linking MetS to Alzheimer’s disease (AD) and amnestic mild cognitive impairment (aMCI), a precursor of AD, is inconsistent and limited. This study examined the association of MetS and its components with aMCI and how APOE-␧e4 and younger age influenced this association. Participants with aMCI (n = 98) and cognitively normal controls (n = 802) were identified from baseline data in a second wave cohort of older subjects aged 55 and over in the Singapore Longitudinal Ageing Study-2 (SLAS-2) in 2009/2010. The associations of MetS and its individual components with aMCI were analyzed using logistic regression controlling for age, gender, education, current smoking, alcohol drink, leisure time activities score, Geriatric Depression Scale score, APOE-␧4, and heart disease or stroke. The analysis was repeated for associations stratified by age and APOE-␧4 status. In multivariate analysis, MetS was associated with an elevated risk of aMCI (OR = 1.79; 95\% CI 1.15–2.77). Among MetS components, central obesity showed a significant association with aMCI (OR = 1.77; 95\%CI 1.11–2.82). The association between MetS and aMCI remained significant on repeated analysis among subjects free of heart disease and stroke. This association was particularly stronger among participants with APOE-␧4 allele (OR = 3.35; 95\% CI, 1.03–10.85) and younger ({$<$}65 years) participants with APOE-␧4 (OR = 6.57; 95\% CI, 1.03–41.74). MetS was found to be associated with aMCI, especially in individuals with APOE-␧4 at younger age in this middle-aged and older cohort.}, + langid = {english}, + file = {/home/src/Offline/Papers/feng et al_2013_metabolic syndrome and amnestic mild cognitive impairment.pdf} +} + +@article{ferguson2016effect, + title = {An Effect Size Primer: A Guide for Clinicians and Researchers.}, + author = {Ferguson, Christopher J}, + date = {2016}, + publisher = {{American Psychological Association}} +} + +@inproceedings{fergusonPsychophysiologicalBiomarkersStress2019, + title = {Psychophysiological {{Biomarkers}} of {{Stress As Predictors}} of {{Behavioral Disturbance}} in {{Autism Spectrum Disorder}}}, + author = {Ferguson, Bradley}, + date = {2019-05-04}, + publisher = {{IMFAR}}, + url = {https://insar.confex.com/insar/2019/webprogram/Paper30285.html}, + urldate = {2019-05-20}, + eventtitle = {{{INSAR}} 2019 {{Annual Meeting}}}, + langid = {english}, + keywords = {autism,center-for-discovery}, + file = {/home/cedarprince/Zotero/storage/GECC7WKX/Paper30285.html} +} + +@article{ferretti2020quantifying, + title = {Quantifying {{SARS-CoV-2}} Transmission Suggests Epidemic Control with Digital Contact Tracing}, + author = {Ferretti, Luca and Wymant, Chris and Kendall, Michelle and Zhao, Lele and Nurtay, Anel and Abeler-Dörner, Lucie and Parker, Michael and Bonsall, David and Fraser, Christophe}, + date = {2020}, + journaltitle = {Science}, + volume = {368}, + number = {6491}, + publisher = {{American Association for the Advancement of Science}} +} + +@book{feyerabendMethod1993, + title = {Against Method}, + author = {Feyerabend, Paul}, + date = {1993}, + edition = {3rd ed}, + publisher = {{Verso}}, + location = {{London ; New York}}, + isbn = {978-0-86091-481-5 978-0-86091-646-8}, + langid = {english}, + pagetotal = {279}, + keywords = {Methodology,Philosophy,Rationalism,Science}, + file = {/home/src/Papers/feyerabend_1993_against method.pdf} +} + +@report{fieldsDesignOperation20202020, + title = {Design and {{Operation}} of the 2020 {{Household Pulse Survey}}, 2020}, + author = {Fields, JF and Hunter-Childs, J and Tersine, A and Sisson, J and Parker, E and Velkoff, V and Logan, C and Shin, H}, + date = {2020}, + institution = {{U.S. Census Bureau}}, + url = {https://www2.census.gov/programs-surveys/demo/technical-documentation/hhp/2020_HPS_Background.pdf}, + urldate = {2020-11-08}, + file = {/home/cedarprince/Zotero/storage/I37Q4LY3/2020_HPS_Background.pdf} +} + +@incollection{fillenbaumConsortiumEstablishRegistry2002, + title = {Consortium to {{Establish}} a {{Registry}} for {{Alzheimer}}'s {{Disease}} ({{CERAD}})}, + booktitle = {Principles and {{Practice}} of {{Geriatric Psychiatry}}}, + author = {Fillenbaum, G. G. and Heyman, A.}, + editor = {Copeland, John R. M. and Abou-Saleh, Mohammed T. and Blazer, Dan G.}, + date = {2002-04-15}, + pages = {228--228}, + publisher = {{John Wiley \& Sons, Ltd}}, + location = {{Chichester, UK}}, + doi = {10.1002/0470846410.ch42(iii)}, + isbn = {978-0-471-98197-8 978-0-470-84641-4}, + langid = {english}, + file = {/home/src/Offline/Papers/fillenbaum_heyman_2002_consortium to establish a registry for alzheimer's disease (cerad).pdf} +} + +@video{filmsroomJeevajalamArsenicFree, + title = {Jeevajalam - {{Arsenic}} Free Drinking Water - {{Documentary}}}, + editor = {{Films Room}}, + url = {https://www.youtube.com/watch?v=YvDPPq8embU}, + urldate = {2015-11-14}, + abstract = {A documentary on the field trial of a nanotechnology-based arsenic-free drinking water unit called, AMRIT, supported by the Government of West Bengal. Basic research leading to this product was supported by the Nano Mission, Government of India. The AMRIT was jointly developed by the Pradeep Research Group, DST Unit of Nanoscience and Thematic Unit of Excellence, IIT Madras and an IIT Madras incubated company, InnoNano Research Pvt. Ltd.}, + editortype = {director}, + keywords = {\#nosource,AMRIT,arsenic,arsenic filter,arsenic free,documentary,drinking water,DST Unit of Nanoscience,Films Room,IIT Madras,Indian Institute Of Technology Madras (College/University),Innonano Research Pvt. Ltd.,Murshidabad,nano,nano science,nano technology,nanocomposite,Nanoparticles,nanotechnology,Pradeep Research Group,Pradeep Thattil,Prof. Pradeep,professor,pure water,research,science,Silver,Suresh Menon,Thematic Unit of Excellenc,water,water filter,water for life,West Bengal} +} + +@article{flanaganSocialVulnerabilityIndex2011, + title = {A Social Vulnerability Index for Disaster Management}, + author = {Flanagan, Barry E. and Gregory, Edward W. and Hallisey, Elaine J. and Heitgerd, Janet L. and Lewis, Brian}, + date = {2011}, + journaltitle = {Journal of homeland security and emergency management}, + shortjournal = {J. Homel. Secur. Emerg. Manag.}, + volume = {8}, + number = {1}, + publisher = {{De Gruyter}}, + isbn = {1547-7355} +} + +@article{fleming2010m, + title = {“{{I}}'m Scared to Look. {{But I}}'m Dying to Know”: {{Information}} Seeking and Sharing on {{Pro-Ana}} Weblogs}, + author = {Fleming-May, Rachel A and Miller, Laura E}, + date = {2010}, + journaltitle = {Proceedings of the American Society for Information Science and Technology}, + shortjournal = {Proc. Am. Soc. Inf. Sci. Technol.}, + volume = {47}, + number = {1}, + pages = {1--9}, + publisher = {{Wiley Online Library}} +} + +@article{flickerMildCognitiveImpairment1991, + title = {Mild Cognitive Impairment in the Elderly: {{Predictors}} of Dementia}, + shorttitle = {Mild Cognitive Impairment in the Elderly}, + author = {Flicker, C. and Ferris, S. H. and Reisberg, B.}, + date = {1991-07-01}, + journaltitle = {Neurology}, + shortjournal = {Neurology}, + volume = {41}, + number = {7}, + pages = {1006--1006}, + issn = {0028-3878, 1526-632X}, + doi = {10.1212/WNL.41.7.1006}, + langid = {english}, + file = {/home/src/Offline/Papers/flicker et al_1991_mild cognitive impairment in the elderly.pdf} +} + +@article{flood30integrated, + title = {Integrated Public Use Microdata Series, Current Population Survey: Version 7.0 [Dataset]. {{Minneapolis}}, {{MN}}: {{Integrated}} Public Use Microdata; 2020}, + author = {Flood, Sarah and King, Miriam and Rodgers, Renae and Ruggles, Steven and Warren, JR} +} + +@article{floresSocialParticipationContext2009, + ids = {floresSocialParticipationContext2009a}, + title = {Social {{Participation}} within a {{Context}} of {{Political Violence}}: {{Implications}} for the {{Promotion}} and {{Exercise}} of the {{Right}} to {{Health}} in {{Guatemala}}}, + shorttitle = {Social {{Participation}} within a {{Context}} of {{Political Violence}}}, + author = {Flores, Walter and Ruano, Ana Lorena and Funchal, Denise Phé}, + date = {2009-01-01}, + journaltitle = {Health and Human Rights}, + shortjournal = {Health Hum. Rights}, + volume = {11}, + number = {1}, + eprint = {10.2307/40285216}, + eprinttype = {jstor}, + pages = {37}, + issn = {10790969}, + doi = {10.2307/40285216}, + abstract = {Sociapl articipatiohnasbeenunderstooindmanydifferenwtaysa, ndthereareeven typologecslassifyinpgarticipatiobnythedegreoef apopulationcsontroiln decision makingP. articipatiocannvaryfroma symboliacct,whichdoesnotinvolvdeecision makingt,oprocesseins whichit constituttehseprincipatlooflor redistributpinogwer withinapopulationT.hisarticlaerguetshatanalysinsgociaplarticipatifornomaperspectivoefpowerrelationrsequireksnowledgoef thehistoricaslo,ciala, ndeconomic processetshathavecharacteristehdesocialrelationisn a specificcontextA. pplying suchananalysitsoGuatemalraevealassymmetripcoawl errelationcsharacterisbeyd a longhistoroyf repressioanndpoliticavliolencTe.hearmedconflicdturintghesecond half of the20th centurhyaddevastatincgonsequenfcoersa largeportionof the populatioans wellas thecountrys'oscialleadershiTp.heongoinvgiolencreesulteidn negativpesychosocieaflfectasmongthepopulationin, cludinmg istrusttowardinstitutionsandlowlevelosf sociaal ndpoliticaplarticipatioAnl.thoughGuatemalmaade progresisn creatinsgpacefsor sociapl articipatioinnpublicpolicyaftersigningthe PeacAe ccordisn 1996,thecountrsytilflacesafter-effeoctfstheconflicOt.neimportanttaskfortheorganisatiotnhsatworkinthefieldof healthandtherighttohealth is to helpregenerattheesociaflabricandto rebuildtrustbetweetnhestateandits citizensS.uchregeneratiionnvolvehselpintghepopulatiognaintheskills,knowledge, andinformationneedeidn ordetroparticipatine andaffecftormapl oliticaplrocesses thataredecideadndpromotebdyvarioupsublicentities,uchas thelegislativaend executivberanchems, unicipaglovernmenatsn,dpoliticapl arties.Thisprocesas lso applietsoothegrrouptshatbuildcitizenshitphrougpharticipatiosnu,chas neighborhoodorganisatioannsdschooalndhealthcommittees.}, + langid = {english}, + file = {/home/src/Offline/Papers/flores et al_2009_social participation within a context of political violence.pdf;/home/src/Offline/Papers/flores et al_2009_social participation within a context of political violence2.pdf} +} + +@article{Fogg:1999:PT:301353.301396, + title = {Persuasive Technologie301398}, + author = {Fogg, B. J.}, + date = {1999-05}, + journaltitle = {Commun. ACM}, + volume = {42}, + number = {5}, + pages = {26--29}, + publisher = {{ACM}}, + address = {New York, NY, USA}, + issn = {0001-0782}, + doi = {10.1145/301353.301396}, + acmid = {301396}, + issue_date = {May 1999}, + numpages = {4}, + keywords = {\#nosource} +} + +@article{folstein1975mini, + title = {“{{Mini-mental}} State”: A Practical Method for Grading the Cognitive State of Patients for the Clinician}, + author = {Folstein, Marshal F and Folstein, Susan E and McHugh, Paul R}, + date = {1975}, + journaltitle = {Journal of psychiatric research}, + shortjournal = {J. Psychiatr. Res.}, + volume = {12}, + number = {3}, + pages = {189--198}, + publisher = {{Pergamon}}, + keywords = {\#nosource} +} + +@online{foundationNorthKoreaEritrea, + title = {North {{Korea}}, {{Eritrea}} Have World's Highest Rates of Modern Slavery - Report}, + author = {Foundation, Thomson Reuters}, + url = {http://news.trust.org/item/20180719050117-n9wwj/}, + urldate = {2018-07-28}, + abstract = {More than 40 million people were enslaved around the world as of 2016}, + organization = {{news.trust.org}}, + keywords = {child-soldiers,eritrea,human-trafficking,labor-trafficking,north-korea,organ-trafficking,sex-trafficking,slavery}, + file = {/home/cedarprince/Zotero/storage/M3YDBGBI/20180719050117-n9wwj.html} +} + +@article{foxe1998parieto, + title = {Parieto-Occipital 1 {{0Hz}} Activity Reflects Anticipatory State of Visual Attention Mechanisms}, + author = {Foxe, John J and Simpson, Gregory V and Ahlfors, Seppo P}, + date = {1998}, + journaltitle = {Neuroreport}, + volume = {9}, + number = {17}, + pages = {3929--3933}, + publisher = {{LWW}} +} + +@article{fraser2020digital, + title = {Digital Contact Tracing: Comparing the Capabilities of Centralised and Decentralised Data Architectures to Effectively Suppress the {{COVID-19}} Epidemic Whilst Maximising Freedom of Movement and Maintaining Privacy}, + author = {Fraser, Christophe and Abeler-Dörner, Lucie and Ferretti, Luca and Parker, Michael and Kendall, Michelle and Bonsall, David}, + date = {2020}, + journaltitle = {University of Oxford}, + shortjournal = {Univ. Oxf.} +} + +@article{freytagOriginsTerrorismCrosscountry2011, + title = {The Origins of Terrorism: {{Cross-country}} Estimates of Socio-Economic Determinants of Terrorism}, + shorttitle = {The Origins of Terrorism}, + author = {Freytag, Andreas and Krüger, Jens J. and Meierrieks, Daniel and Schneider, Friedrich}, + date = {2011-12}, + journaltitle = {European Journal of Political Economy}, + shortjournal = {European Journal of Political Economy}, + volume = {27}, + pages = {S5-S16}, + issn = {01762680}, + doi = {10.1016/j.ejpoleco.2011.06.009}, + abstract = {Prior research has concluded that socio-economic development does not significantly affect terrorism. We take an alternative view. First, we note that a country's socio-economic circumstances affect terrorists' behavior through terrorism's opportunity costs. We argue that this reasoning also holds for the case of supreme value terrorism. Then, we run a series of negative binomial regressions for 110 countries between 1971 and 2007 to test the hypothesis that poor socio-economic development is conducive to terrorism. We find that socio-economic variables indeed matter to terrorism, contrary to other results. Our findings imply that countries can benefit from economic development and growth in terms of a reduction in terrorism.}, + langid = {english}, + file = {/home/src/Papers/freytag et al_2011_the origins of terrorism.pdf} +} + +@online{fridmanJudeaPearlCausal2019, + title = {Judea {{Pearl}}: {{Causal Reasoning}}, {{Counterfactuals}}, {{Bayesian Networks}}, and the {{Path}} to {{AGI}} | {{MIT}} | {{Artificial Intelligence Podcast}}}, + shorttitle = {Judea {{Pearl}}}, + author = {Fridman, Lex}, + date = {2019-12-11T16:33:31+00:00}, + url = {https://lexfridman.com/judea-pearl/}, + urldate = {2020-03-21}, + abstract = {Judea Pearl is a professor at UCLA and a winner of the Turing Award, that’s generally recognized as the Nobel Prize of computing. He is one of the seminal figures in the field of artificial intelligence, computer science, and statistics. He has developed and championed probabilistic approaches to AI, including Bayesian Networks and profound ideas in causality in general. These ideas are important not just for AI, but to our understanding and practice of science. But in the field of AI, the idea of causality, cause and effect, to many, lies at the core of what is currently missing and}, + langid = {american}, + organization = {{Lex Fridman}}, + file = {/home/cedarprince/Zotero/storage/7QKRVALH/judea-pearl.html} +} + +@article{friedenSixComponentsNecessary2014, + title = {Six {{Components Necessary}} for {{Effective Public Health Program Implementation}}}, + author = {Frieden, Thomas}, + date = {2014}, + journaltitle = {American Journal of Public Health}, + shortjournal = {Am. J. Public Health}, + volume = {104}, + number = {17-22}, + file = {/home/src/Offline/Papers/frieden_2014_six components necessary for effective public health program implementation.pdf} +} + +@article{friston2011functional, + title = {Functional and Effective Connectivity: A Review}, + author = {Friston, Karl J}, + date = {2011}, + journaltitle = {Brain connectivity}, + shortjournal = {Brain Connect.}, + volume = {1}, + number = {1}, + pages = {13--36}, + publisher = {{Mary Ann Liebert, Inc. 140 Huguenot Street, 3rd Floor New Rochelle, NY 10801 USA}} +} + +@article{fujiura2003continuum, + title = {Continuum of Intellectual Disability: Demographic Evidence for the “Forgotten Generation”}, + author = {Fujiura, Glenn T}, + date = {2003}, + journaltitle = {Mental Retardation}, + shortjournal = {Ment. Retard.}, + volume = {41}, + number = {6}, + pages = {420--429} +} + +@book{fuld1977fuld, + title = {Fuld Object-Memory Evaluation}, + author = {Fuld, Paula Altman}, + date = {1977}, + publisher = {{Stoelting Company}}, + keywords = {\#nosource} +} + +@article{funder2019evaluating, + title = {Evaluating Effect Size in Psychological Research: {{Sense}} and Nonsense}, + author = {Funder, David C and Ozer, Daniel J}, + date = {2019}, + journaltitle = {Advances in Methods and Practices in Psychological Science}, + shortjournal = {Adv. Methods Pract. Psychol. Sci.}, + volume = {2}, + number = {2}, + pages = {156--168}, + publisher = {{Sage Publications Sage CA: Los Angeles, CA}} +} + +@software{gabaRealtimeObjectDetection2019, + title = {Real-Time Object Detection on an Aerial Video Stream from a {{UAV}} Using {{RetinaNet}}: {{SatyamGaba}}/Real-Time\_object\_detection\_with\_uavs}, + shorttitle = {Real-Time Object Detection on an Aerial Video Stream from a {{UAV}} Using {{RetinaNet}}}, + author = {Gaba, Satyam}, + date = {2019-05-29T10:12:10Z}, + origdate = {2019-01-23T08:31:05Z}, + url = {https://github.com/SatyamGaba/real-time_object_detection_with_uavs}, + urldate = {2019-07-29}, + keywords = {\#nosource} +} + +@article{galesic2006complementing, + title = {Complementing Random-Digit-Dial Telephone Surveys with Other Approaches to Collecting Sensitive Data}, + author = {Galesic, Mirta and Tourangeau, Roger and Couper, Mick P}, + date = {2006}, + journaltitle = {American journal of preventive medicine}, + shortjournal = {Am. J. Prev. Med.}, + volume = {31}, + number = {5}, + pages = {437--443}, + publisher = {{Elsevier}} +} + +@article{ganguliTenyearIncidenceDementia2000, + title = {Ten-Year Incidence of Dementia in a Rural Elderly {{US}} Community Population: {{The MoVIES Project}}}, + shorttitle = {Ten-Year Incidence of Dementia in a Rural Elderly {{US}} Community Population}, + author = {Ganguli, M. and Dodge, H. H. and Chen, P. and Belle, S. and DeKosky, S. T.}, + date = {2000-03-14}, + journaltitle = {Neurology}, + shortjournal = {Neurology}, + volume = {54}, + number = {5}, + pages = {1109--1116}, + issn = {0028-3878, 1526-632X}, + doi = {10.1212/WNL.54.5.1109}, + langid = {english}, + file = {/home/src/Offline/Papers/ganguli et al_2000_ten-year incidence of dementia in a rural elderly us community population.pdf} +} + +@inbook{garciamartinezLoadingPlottingFiltering2017, + title = {Loading, {{Plotting}}, and {{Filtering RR Intervals}}}, + booktitle = {Heart {{Rate Variability Analysis}} with the {{R}} Package {{RHRV}}}, + author = {García Martínez, Constantino Antonio and Otero Quintana, Abraham and Vila, Xosé A. and Lado Touriño, María José and Rodríguez-Liñares, Leandro and Rodríguez Presedo, Jesús María and Méndez Penín, Arturo José}, + date = {2017}, + series = {Use {{R}}!}, + pages = {15--28}, + publisher = {{Springer International Publishing}}, + location = {{Cham}}, + doi = {10.1007/978-3-319-65355-6_2}, + abstract = {The initial steps to work with RHRV functions are presented in this chapter. The process starts with the loading of records containing beat positions that should be preprocessed prior to frequency, time, or nonlinear analysis. Data can be stored in various types of files, and RHRV routines can deal with different data formats. Next, heart rate must be obtained from beat positions. It may occur that spurious points appear in the heart rate signal. RHRV allows users to delete these outliers, when necessary. Besides, the signal can be filtered to reject automatically points that do not correspond to acceptable physiological values.}, + bookauthor = {García Martínez, Constantino Antonio and Otero Quintana, Abraham and Vila, Xosé A. and Lado Touriño, María José and Rodríguez-Liñares, Leandro and Rodríguez Presedo, Jesús María and Méndez Penín, Arturo José}, + isbn = {978-3-319-65354-9 978-3-319-65355-6}, + langid = {english}, + file = {/home/src/Offline/Papers/garcía martínez et al_2017_loading, plotting, and filtering rr intervals.pdf} +} + +@article{gardener2011perinatal, + title = {Perinatal and Neonatal Risk Factors for Autism: A Comprehensive Meta-Analysis}, + author = {Gardener, Hannah and Spiegelman, Donna and Buka, Stephen L}, + date = {2011}, + journaltitle = {Pediatrics}, + volume = {128}, + number = {2}, + pages = {344--355}, + publisher = {{Am Acad Pediatrics}} +} + +@article{garg2020hospitalization, + title = {Hospitalization Rates and Characteristics of Patients Hospitalized with Laboratory-Confirmed Coronavirus Disease 2019—{{COVID-NET}}, 14 {{States}}, {{March}} 1–30, 2020}, + author = {Garg, Shikha}, + date = {2020}, + journaltitle = {MMWR. Morbidity and mortality weekly report}, + shortjournal = {MMWR Morb. Mortal. Wkly. Rep.}, + volume = {69} +} + +@article{garg2020hospitalization, + title = {Hospitalization Rates and Characteristics of Patients Hospitalized with Laboratory-Confirmed Coronavirus Disease 2019—{{COVID-NET}}, 14 {{States}}, {{March}} 1–30, 2020}, + author = {Garg, Shikha and Kim, Lindsay and Whitaker, Michael and O’Halloran, Alissa and Cummings, Charisse and Holstein, Rachel and Prill, Mila and Chai, Shua J and Kirley, Pam D and Alden, Nisha B and others}, + date = {2020}, + journaltitle = {Morbidity and mortality weekly report}, + shortjournal = {Morb. Mortal. Wkly. Rep.}, + volume = {69}, + number = {15}, + pages = {458}, + publisher = {{Centers for Disease Control and Prevention}} +} + +@online{garminGarminVivosmartFitness, + title = {Garmin Vivosmart® 4 | {{Fitness Activity Tracker}} | {{Pulse Ox}}}, + author = {Garmin and or its {subsidiaries}, Garmin Ltd}, + url = {https://buy.garmin.com/en-US/US/p/605739}, + urldate = {2019-12-10}, + abstract = {Style meets function with the vívosmart® 4 fitness activity tracker. Features include a Pulse Ox sensor to gauge your blood oxygen saturation levels.}, + langid = {american}, + organization = {{Garmin}}, + file = {/home/cedarprince/Zotero/storage/LM9E7CVP/605739.html} +} + +@inproceedings{gederiFusionImageSignal2012, + title = {Fusion of Image and Signal Processing for the Detection of Obstructive Sleep Apnea}, + booktitle = {Proceedings of 2012 {{IEEE-EMBS International Conference}} on {{Biomedical}} and {{Health Informatics}}}, + author = {Gederi, E. and Clifford, G. D.}, + date = {2012-01}, + pages = {890--893}, + publisher = {{IEEE}}, + location = {{Hong Kong}}, + doi = {10.1109/BHI.2012.6211731}, + abstract = {Patients with obstructive sleep apnea (OSA) syn­ drome experience repeated periods of apnea and arousal during sleep. A condition which in short term leads to excessive daytime sleepiness and in the long term may have clinical consequences such as stroke and cardiovascular abnormalities. Although complex equipment can be used to screen for sleep apnea, the screening tests are often expensive, inconvenient for the patient, and time-consuming to be manually analysed. This research investigates methods for automating sleep apnea screening using low-cost off-body cameras. Polysomnography video recordings of twenty one patients, 11 with OSA, and 10 'normals' who were referred for suspected OSA, were analysed with the objective to differentiate the two groups. The proposed technique is based on motion estimation in videos using two successive video frames. The complexities of motion signals from the video data were analysed by calculating sample entropy over multiple time scales. The sample entropy values providing the best separation between the OSA and non-OSA groups were chosen using the Bhattacharyya distance and were then used as the input to a support vector machine classifier. The classification results both on the training and validation data indicate that patients with OSA can be differentiated from patients without OSA with 90\% accuracy.}, + eventtitle = {2012 {{IEEE-EMBS International Conference}} on {{Biomedical}} and {{Health Informatics}} ({{BHI}})}, + isbn = {978-1-4577-2177-9 978-1-4577-2176-2 978-1-4577-2175-5}, + langid = {english}, + keywords = {sleep}, + file = {/home/cedarprince/Zotero/storage/82TMCCI6/Gederi and Clifford - 2012 - Fusion of image and signal processing for the dete.pdf;/home/src/Offline/Papers/gederi_clifford_2012_fusion of image and signal processing for the detection of obstructive sleep.pdf} +} + +@online{GeorgiaDepartmentPublic, + title = {Georgia {{Department}} of {{Public Health}}, {{Office}} of {{Health Indicators}} for {{Planning OASIS}}}, + url = {https://oasis.state.ga.us/oasis/webquery/qryMaternalDeath.aspx}, + urldate = {2018-05-26}, + keywords = {african-american,database,georgia,maternal-mortality,race,us}, + file = {/home/cedarprince/Zotero/storage/GEJ3S2MF/qryMaternalDeath.html} +} + +@article{germain2012direct, + title = {Direct and Indirect Forms of Non-Suicidal Self-Injury: {{Evidence}} for a Distinction}, + author = {Germain, Sarah A St and Hooley, Jill M}, + date = {2012}, + journaltitle = {Psychiatry research}, + shortjournal = {Psychiatry Res.}, + volume = {197}, + number = {1-2}, + pages = {78--84}, + publisher = {{Elsevier}} +} + +@article{gero1998biofeedback, + title = {Biofeedback Apparatus}, + author = {Gero, Jeffrey}, + date = {1998-04-21}, + publisher = {{Google Patents}} +} + +@online{GettingBottomEN407, + title = {Getting to the {{Bottom}} of {{EN407}}: {{Thermal Protection}}}, + shorttitle = {Getting to the {{Bottom}} of {{EN407}}}, + url = {https://www.hexarmor.com/posts/getting-to-the-bottom-of-en407-thermal-protection}, + urldate = {2020-02-11}, + abstract = {It's not enough to claim your product is safe. It also needs to live up to a standard. Learn more about the EN407 standard and how it keeps you safe from thermal hazards.}, + langid = {american}, + organization = {{HexArmor}}, + file = {/home/cedarprince/Zotero/storage/6E8CDPXY/getting-to-the-bottom-of-en407-thermal-protection.html} +} + +@article{geuter2014parametric, + title = {Parametric Trial-by-Trial Prediction of Pain by Easily Available Physiological Measures}, + author = {Geuter, Stephan and Gamer, Matthias and Onat, Selim and Büchel, Christian}, + date = {2014}, + journaltitle = {PAIN®}, + volume = {155}, + number = {5}, + pages = {994--1001}, + publisher = {{Elsevier}} +} + +@software{ghoshThisHasBeen2017, + title = {This Has Been Done Using {{Template Matching}} in {{OpenCV}} Python: Damayant/{{Object-Detection-from-aerial-images}}}, + shorttitle = {This Has Been Done Using {{Template Matching}} in {{OpenCV}} Python}, + author = {Ghosh, Damayanti}, + date = {2017-04-02T20:26:13Z}, + origdate = {2017-04-02T20:24:35Z}, + url = {https://github.com/damayant/Object-Detection-from-aerial-images}, + urldate = {2019-07-29}, + keywords = {\#nosource} +} + +@book{gibbsCambridgeHandbookMetaphor, + title = {The {{Cambridge Handbook}} of {{Metaphor}} and {{Thought}}}, + author = {Gibbs, Raymond W}, + langid = {english}, + file = {/home/src/Offline/Papers/gibbs_the cambridge handbook of metaphor and thought.pdf} +} + +@article{gibneyRESEARCHERSWANTWIRE, + title = {{{RESEARCHERS WANT TO WIRE THE HUMAN BODY WITH SENSORS THAT COULD HARVEST REAMS OF DATA}} — {{AND TRANSFORM HEALTH CARE}}.}, + author = {Gibney, Elizabeth}, + pages = {3}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Gibney_RESEARCHERS WANT TO WIRE THE HUMAN BODY WITH SENSORS THAT COULD HARVEST REAMS.pdf} +} + +@article{gilchristAutomatedDetectionRepetitive2018, + title = {Automated {{Detection}} of {{Repetitive Motor Behaviors}} as an {{Outcome Measurement}} in {{Intellectual}} and {{Developmental Disabilities}}}, + author = {Gilchrist, Kristin H. and Hegarty-Craver, Meghan and Christian, Robert B. and Grego, Sonia and Kies, Ashley C. and Wheeler, Anne C.}, + date = {2018-05}, + journaltitle = {Journal of Autism and Developmental Disorders}, + shortjournal = {J Autism Dev Disord}, + volume = {48}, + number = {5}, + pages = {1458--1466}, + issn = {0162-3257, 1573-3432}, + doi = {10.1007/s10803-017-3408-6}, + abstract = {Repetitive sensory motor behaviors are a direct target for clinical treatment and a potential treatment endpoint for individuals with intellectual or developmental disabilities. By removing the burden associated with video annotation or direct observation, automated detection of stereotypy would allow for longer term monitoring in ecologic settings. We report automated detection of common stereotypical motor movements using commercially available accelerometers affixed to the body and a generalizable detection algorithm. The method achieved a sensitivity of 80\% for body rocking and 93\% for hand flapping without individualized algorithm training or foreknowledge of subject’s specific movements. This approach is well-suited for implementation in a continuous monitoring system outside of a clinical setting.}, + langid = {english}, + file = {/home/src/Offline/Papers/gilchrist et al_2018_automated detection of repetitive motor behaviors as an outcome measurement in.pdf} +} + +@online{gimbalSeries22BeaconN.D., + title = {Series 22 {{Beacon}}}, + author = {Gimbal}, + year = {N.D.}, + url = {https://store.gimbal.com/products/s22}, + urldate = {2020-04-30}, + abstract = {Gimbal Series 22 Beacon iBeacon}, + organization = {{The Gimbal Store}}, + file = {/home/cedarprince/Zotero/storage/UPC7SR8Y/s22.html} +} + +@article{giudice2009programmed, + title = {Programmed to Learn? {{The}} Ontogeny of Mirror Neurons}, + author = {Giudice, Marco Del and Manera, Valeria and Keysers, Christian}, + date = {2009}, + journaltitle = {Developmental science}, + shortjournal = {Dev. Sci.}, + volume = {12}, + number = {2}, + pages = {350--363}, + publisher = {{Wiley Online Library}} +} + +@online{Glass, + title = {Glass}, + url = {https://www.google.com/glass/start/}, + urldate = {2019-12-10}, + abstract = {Glass Enterprise Edition is a hands-free device, for hands-on workers that removes distractions and helps you focus on what's most important.}, + langid = {english}, + organization = {{Glass}}, + file = {/home/cedarprince/Zotero/storage/DPICUCRE/start.html} +} + +@article{godoy-paizNotJustAnother2012, + title = {Not {{Just}} “{{Another Woman}}”: {{Femicide}} and {{Representation}} in {{Guatemala}}: {{Not Just}} “{{Another Woman}}”: {{Femicide}} and {{Representation}} in {{Guatemala}}}, + shorttitle = {Not {{Just}} “{{Another Woman}}”}, + author = {Godoy-Paiz, Paula}, + date = {2012-03}, + journaltitle = {The Journal of Latin American and Caribbean Anthropology}, + shortjournal = {The Journal of Latin American and Caribbean Anthropology}, + volume = {17}, + number = {1}, + pages = {88--109}, + issn = {19354932}, + doi = {10.1111/j.1935-4940.2012.01192.x}, + langid = {english}, + file = {/home/src/Offline/Papers/godoy-paiz_2012_not just “another woman”.pdf} +} + +@book{GoldenRatioDiscovered2010, + title = {Golden Ratio Discovered in a Quantum World}, + date = {2010-01-07}, + publisher = {{Eurekalert.org}}, + url = {http://www.eurekalert.org/pub_releases/2010-01/haog-grd010510.php}, + annotation = {Context Object: ctx\_ver=Z39.88-2004\&rft\_val\_fmt=info\%3Aofi\%2Ffmt\%3Akev\%3Amtx\%3Abook\&rft.genre=unknown\&rft.btitle=Golden+ratio+discovered+in+a+quantum+world\&rft.pub=Eurekalert.org\&rft.date=2010-01-07\&rft\_id=http\%3A\%2F\%2Fwww.eurekalert.org\%2Fpub\_releases\%2F2010-01\%2Fhaog-grd010510.php\&rfr\_id=info\%3Asid\%2Fen.wikipedia.org\%3AGolden+ratio} +} + +@patent{goldenSystemMethodImproving2016, + type = {patentus}, + title = {System and Method for Improving {{GPS}} Accuracy in a Device by Utilizing Increased Time Stamp Accuracy}, + author = {Golden, John Michael and MacGreigor, U. Angus}, + holder = {{WOLF-TEK LLC}}, + date = {2016-02-16}, + number = {9261599B1}, + url = {https://patents.google.com/patent/US9261599B1/en}, + urldate = {2020-04-21}, + keywords = {gps,means,pseudo,time value,value}, + file = {/home/src/Offline/Papers/golden_macgreigor_2016_system and method for improving gps accuracy in a device by utilizing increased.pdf} +} + +@book{golding1987lord, + title = {Lord of the Flies: {{Casebook}} Edition}, + author = {Golding, William}, + date = {1987}, + publisher = {{Penguin}} +} + +@article{gonzalezSystematicReviewHealth2018, + title = {A {{Systematic Review}} of the {{Health}} of {{Vulnerable Populations}} within {{US Rural Societies}}}, + author = {Gonzalez, Kattiria M}, + date = {2018}, + journaltitle = {Online Journal of Rural Nursing and Health Care}, + shortjournal = {OJRNHC}, + volume = {18}, + number = {1}, + pages = {112--147}, + doi = {10.14574/ojrnhc.v18i1.507}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/ZZ62X7K3/Gonzalez_2018_A Systematic Review of the Health of Vulnerable Populations within US Rural.pdf} +} + +@article{goodeGoogleCEOSundar18, + title = {Google {{CEO Sundar Pichai Compares Impact}} of {{AI}} to {{Electricity}} and {{Fire}}}, + author = {Goode, Lauren}, + date = {0018-01-19}, + journaltitle = {The Verge}, + url = {https://www.theverge.com/2018/1/19/16911354/google-ceo-sundar-pichai-ai-artificial-intelligence-fire-electricity-jobs-cancer}, + urldate = {2018-02-14}, + entrysubtype = {newspaper}, + keywords = {\#nosource} +} + +@inproceedings{goodwinPredictingImminentAggression2018, + title = {Predicting {{Imminent Aggression Onset}} in {{Minimally-Verbal Youth}} with {{Autism Spectrum Disorder Using Preceding Physiological Signals}}}, + booktitle = {Proceedings of the 12th {{EAI International Conference}} on {{Pervasive Computing Technologies}} for {{Healthcare}} - {{PervasiveHealth}} '18}, + author = {Goodwin, Matthew S. and Erdoğmuş, Deniz and Ioannidis, Stratis and Özdenizci, Ozan and Cumpanasoiu, Catalina and Tian, Peng and Guo, Yuan and Stedman, Amy and Peura, Christine and Mazefsky, Carla and Siegel, Matthew}, + date = {2018}, + pages = {201--207}, + publisher = {{ACM Press}}, + location = {{New York, NY, USA}}, + doi = {10.1145/3240925.3240980}, + eventtitle = {The 12th {{EAI International Conference}}}, + isbn = {978-1-4503-6450-8}, + langid = {english}, + file = {/home/src/Offline/Papers/goodwin et al_2018_predicting imminent aggression onset in minimally-verbal youth with autism.pdf} +} + +@article{gorgolewskiBrainImagingData2016, + title = {The Brain Imaging Data Structure, a Format for Organizing and Describing Outputs of Neuroimaging Experiments}, + author = {Gorgolewski, Krzysztof J. and Auer, Tibor and Calhoun, Vince D. and Craddock, R. Cameron and Das, Samir and Duff, Eugene P. and Flandin, Guillaume and Ghosh, Satrajit S. and Glatard, Tristan and Halchenko, Yaroslav O. and Handwerker, Daniel A. and Hanke, Michael and Keator, David and Li, Xiangrui and Michael, Zachary and Maumet, Camille and Nichols, B. Nolan and Nichols, Thomas E. and Pellman, John and Poline, Jean-Baptiste and Rokem, Ariel and Schaefer, Gunnar and Sochat, Vanessa and Triplett, William and Turner, Jessica A. and Varoquaux, Gaël and Poldrack, Russell A.}, + date = {2016-12}, + journaltitle = {Scientific Data}, + shortjournal = {Sci Data}, + volume = {3}, + number = {1}, + pages = {160044}, + issn = {2052-4463}, + doi = {10.1038/sdata.2016.44}, + langid = {english}, + file = {/home/src/Papers/gorgolewski et al_2016_the brain imaging data structure, a format for organizing and describing.pdf} +} + +@article{gorgolewskiBrainImagingData2016a, + title = {The Brain Imaging Data Structure, a Format for Organizing and Describing Outputs of Neuroimaging Experiments}, + author = {Gorgolewski, Krzysztof J. and Auer, Tibor and Calhoun, Vince D. and Craddock, R. Cameron and Das, Samir and Duff, Eugene P. and Flandin, Guillaume and Ghosh, Satrajit S. and Glatard, Tristan and Halchenko, Yaroslav O. and Handwerker, Daniel A. and Hanke, Michael and Keator, David and Li, Xiangrui and Michael, Zachary and Maumet, Camille and Nichols, B. Nolan and Nichols, Thomas E. and Pellman, John and Poline, Jean-Baptiste and Rokem, Ariel and Schaefer, Gunnar and Sochat, Vanessa and Triplett, William and Turner, Jessica A. and Varoquaux, Gaël and Poldrack, Russell A.}, + date = {2016-06-21}, + journaltitle = {Scientific Data}, + shortjournal = {Sci. Data}, + volume = {3}, + number = {1}, + pages = {160044}, + publisher = {{Nature Publishing Group}}, + issn = {2052-4463}, + doi = {10.1038/sdata.2016.44}, + abstract = {The development of magnetic resonance imaging (MRI) techniques has defined modern neuroimaging. Since its inception, tens of thousands of studies using techniques such as functional MRI and diffusion weighted imaging have allowed for the non-invasive study of the brain. Despite the fact that MRI is routinely used to obtain data for neuroscience research, there has been no widely adopted standard for organizing and describing the data collected in an imaging experiment. This renders sharing and reusing data (within or between labs) difficult if not impossible and unnecessarily complicates the application of automatic pipelines and quality assurance protocols. To solve this problem, we have developed the Brain Imaging Data Structure (BIDS), a standard for organizing and describing MRI datasets. The BIDS standard uses file formats compatible with existing software, unifies the majority of practices already common in the field, and captures the metadata necessary for most common data processing operations.}, + issue = {1}, + langid = {english}, + file = {/home/src/Papers/gorgolewski et al_2016_the brain imaging data structure, a format for organizing and describing2.pdf;/home/cedarprince/Zotero/storage/Z9BEFEN3/sdata201644.html} +} + +@article{graff1967syndrome, + title = {The Syndrome of the Wrist Cutter}, + author = {Graff, Harold and Mallin, Richard}, + date = {1967}, + journaltitle = {American Journal of Psychiatry}, + shortjournal = {Am. J. Psychiatry}, + volume = {124}, + number = {1}, + pages = {36--42}, + publisher = {{Am Psychiatric Assoc}} +} + +@article{gramfortMEGEEGData2013, + title = {{{MEG}} and {{EEG}} Data Analysis with {{MNE-Python}}}, + author = {Gramfort, Alexandre and Luessi, Martin and Larson, Eric and Engemann, Denis A. and Strohmeier, Daniel and Brodbeck, Christian and Goj, Roman and Jas, Mainak and Brooks, Teon and Parkkonen, Lauri and Hämäläinen, Matti}, + date = {2013}, + journaltitle = {Frontiers in Neuroscience}, + shortjournal = {Front. Neurosci.}, + volume = {7}, + publisher = {{Frontiers}}, + issn = {1662-453X}, + doi = {10.3389/fnins.2013.00267}, + abstract = {Magnetoencephalography and electroencephalography (M/EEG) measure the weakelectromagnetic signals generated by neuronal activity in the brain. Using thesesignals to characterize and locate neural activation in the brain is achallenge that requires expertise in physics, signalprocessing, statistics, and numerical methods. As part of the MNE softwaresuite, MNE-Python is an open-sourcesoftware package that addresses this challenge by providingstate-of-the-art algorithms implemented in Python that cover multiple methods of data preprocessing, source localization, statistical analysis, and estimation offunctional connectivity between distributed brain regions.All algorithms and utility functions are implemented in a consistent manner with well-documented interfaces, enabling users to create M/EEG data analysispipelines by writing Python scripts.Moreover, MNE-Python is tightly integrated with the core Python libraries for scientificcomptutation (Numpy, Scipy) and visualization (matplotlib and Mayavi), as wellas the greater neuroimaging ecosystem in Python via the Nibabel package. The code is provided under the new BSD licenseallowing code reuse, even in commercial products. Although MNE-Python has onlybeen under heavy development for a couple of years, it has rapidly evolved withexpanded analysis capabilities and pedagogical tutorials because multiple labs have collaborated during code development to help share best practices.MNE-Python also gives easy access to preprocessed datasets,helping users to get started quickly and facilitating reproducibility ofmethods by other researchers. Full documentation, including dozens ofexamples, is available at http://martinos.org/mne.}, + langid = {english}, + keywords = {Electroencephalography (EEG),Magnetoencephalography (MEG),Neuroimaging,open-source,python,Software}, + file = {/home/src/Papers/gramfort et al_2013_meg and eeg data analysis with mne-python.pdf} +} + +@online{GRANTAEduPack, + title = {{{GRANTA EduPack}}}, + url = {https://grantadesign.com/education/ces-edupack/}, + urldate = {2020-04-27}, + langid = {american}, + organization = {{Granta Design}}, + file = {/home/cedarprince/Zotero/storage/GUZRWK5K/ces-edupack.html} +} + +@article{gratz2001measurement, + title = {Measurement of Deliberate Self-Harm: {{Preliminary}} Data on the {{Deliberate Self-Harm Inventory}}}, + author = {Gratz, Kim L}, + date = {2001}, + journaltitle = {Journal of psychopathology and behavioral assessment}, + shortjournal = {J. Psychopathol. Behav. Assess.}, + volume = {23}, + number = {4}, + pages = {253--263}, + publisher = {{Springer}} +} + +@online{gravottaCheapNanotechFilter2013, + title = {Cheap {{Nanotech Filter Clears Hazardous Microbes}} and {{Chemicals}} from {{Drinking Water}}}, + author = {Gravotta, Luciana}, + date = {2013-05-07}, + url = {http://www.scientificamerican.com/article/cheap-nanotech-filter-water/}, + urldate = {2015-11-25}, + abstract = {A \$16 device could provide a family of five with clean water for an entire year}, + organization = {{Scientific American}}, + file = {/home/cedarprince/Zotero/storage/4MK9X73Q/cheap-nanotech-filter-water.html} +} + +@article{grayCOVID19OtherPandemic2020, + title = {{{COVID-19}} and the Other Pandemic: Populations Made Vulnerable by Systemic Inequity}, + shorttitle = {{{COVID-19}} and the Other Pandemic}, + author = {Gray, Darrell M. and Anyane-Yeboa, Adjoa and Balzora, Sophie and Issaka, Rachel B. and May, Folasade P.}, + date = {2020-09}, + journaltitle = {Nature Reviews Gastroenterology \& Hepatology}, + shortjournal = {Nat Rev Gastroenterol Hepatol}, + volume = {17}, + number = {9}, + pages = {520--522}, + issn = {1759-5045, 1759-5053}, + doi = {10.1038/s41575-020-0330-8}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/V2NAC3B9/Gray et al_2020_COVID-19 and the other pandemic.pdf} +} + +@incollection{grierSilverItsCompounds1983, + title = {Silver and Its Compounds}, + booktitle = {Disinfection, {{Sterilization}}, and {{Preservation}}}, + author = {Grier, Nathaniel}, + editor = {Block, Seymour}, + date = {1983}, + edition = {3rd}, + publisher = {{Lea \& Febiger}}, + location = {{Philadelphia, PA}}, + keywords = {\#nosource,Antimicrobial,Disinfectants,Micro-organisms,Noble metals,Silver} +} + +@online{griffithsAllinoneAppleWatch2015, + title = {The All-in-One {{Apple Watch}} Spreadsheet}, + author = {Griffiths, Rob}, + date = {2015-03-11T16:46:23+00:00}, + url = {https://robservatory.com/the-all-in-one-apple-watch-spreadsheet/}, + urldate = {2020-02-11}, + abstract = {Let me get this out of the way first: I am not a watch guy. I own a watch I use for running. I own a few dress watches that I used to put on when I had a big fancy business meeting to attend. But t…}, + langid = {american}, + organization = {{The Robservatory}}, + file = {/home/cedarprince/Zotero/storage/JIDY7WFR/the-all-in-one-apple-watch-spreadsheet.html} +} + +@article{grundy2005diagnosis, + title = {Diagnosis and Management of the Metabolic Syndrome: An {{American Heart Association}}/{{National Heart}}, {{Lung}}, and {{Blood Institute}} Scientific Statement}, + author = {Grundy, Scott M and Cleeman, James I and Daniels, Stephen R and Donato, Karen A and Eckel, Robert H and Franklin, Barry A and Gordon, David J and Krauss, Ronald M and Savage, Peter J and Smith Jr, Sidney C and others}, + date = {2005}, + journaltitle = {Circulation}, + volume = {112}, + number = {17}, + pages = {2735--2752}, + publisher = {{Am Heart Assoc}}, + keywords = {\#nosource} +} + +@online{GTD15Minutes, + title = {{{GTD}} in 15 Minutes – {{A Pragmatic Guide}} to {{Getting Things Done}}}, + url = {https://hamberg.no/gtd}, + urldate = {2020-03-19}, + file = {/home/cedarprince/Zotero/storage/YQQX9AVS/gtd.html} +} + +@article{guaitaBrainAgingDementia2013, + title = {Brain Aging and Dementia during the Transition from Late Adulthood to Old Age: Design and Methodology of the “{{Invece}}.{{Ab}}” Population-Based Study}, + shorttitle = {Brain Aging and Dementia during the Transition from Late Adulthood to Old Age}, + author = {Guaita, Antonio and Colombo, Mauro and Vaccaro, Roberta and Fossi, Silvia and Vitali, Silvia Francesca and Forloni, Gianluigi and Polito, Letizia and Davin, Annalisa and Ferretti, Virginia Valeria and Villani, Simona}, + date = {2013-12}, + journaltitle = {BMC Geriatrics}, + shortjournal = {BMC Geriatr}, + volume = {13}, + number = {1}, + pages = {98}, + issn = {1471-2318}, + doi = {10.1186/1471-2318-13-98}, + abstract = {Background: Developed countries are experiencing an unprecedented increase in life expectancy that is accompanied by a tremendous rise in the number of people with dementia. The purpose of this paper is to report on the study design and methodology of an Italian population-based study on brain aging and dementia in the elderly. This multi-domain study is structured in two phases. Our goal is to gather sufficient data to estimate the prevalence (phase I: cross-sectional study), the incidence and the progression of dementia and its subtypes as well as cognitive impairment (phase II: follow-up study) and to identify socio-demographic, clinical, and lifestyle factors associated with dementia and the quality of brain aging in people aged 70–74 years, a crucial point between late adulthood and old age.}, + langid = {english}, + file = {/home/src/Offline/Papers/guaita et al_2013_brain aging and dementia during the transition from late adulthood to old age.pdf} +} + +@online{GuideHowAnki2016, + title = {[{{Guide}}] {{How}} to {{Anki Maths}} the Right Way}, + date = {2016-01-31}, + url = {https://www.reddit.com/r/Anki/comments/43mf83/guide_how_to_anki_maths_the_right_way/}, + urldate = {2023-01-09}, + organization = {{Reddit}} +} + +@patent{haaveMethodSystemAsset2007, + type = {patentus}, + title = {Method and System for Asset Tracking}, + author = {Haave, Luther and Davies, Ric and Haave, Kristoffer}, + holder = {{Longview Advantage Inc}}, + date = {2007-01-30}, + number = {7171187B2}, + url = {https://patents.google.com/patent/US7171187B2/en}, + urldate = {2020-04-21}, + langid = {english}, + keywords = {alarm message,management system,method,tracking,tracking device}, + file = {/home/src/Offline/Papers/haave et al_2007_method and system for asset tracking.pdf} +} + +@article{hachinski1974multi, + title = {Multi-Infarct Dementia: A Cause of Mental Deterioration in the Elderly}, + author = {Hachinski, Vladimir C and Lassen, Niels A and Marshall, John}, + date = {1974}, + journaltitle = {The Lancet}, + volume = {304}, + number = {7874}, + pages = {207--209}, + publisher = {{Elsevier}}, + keywords = {\#nosource} +} + +@article{haleDoesMulticulturalismMenace2002, + title = {Does {{Multiculturalism Menace}}? {{Governance}}, {{Cultural Rights}} and the {{Politics}} of {{Identity}} in {{Guatemala}}}, + shorttitle = {Does {{Multiculturalism Menace}}?}, + author = {Hale, Charles R.}, + date = {2002-08}, + journaltitle = {Journal of Latin American Studies}, + shortjournal = {J. Lat. Am. Stud.}, + volume = {34}, + number = {3}, + pages = {485--524}, + issn = {0022-216X, 1469-767X}, + doi = {10.1017/S0022216X02006521}, + abstract = {This article challenges the assumption that the underlying principles of state-endorsed ‘ multiculturalism ’ stand in tension with neoliberal politicaleconomic policies. Based on ethnographic research in Guatemala, it is argued that neoliberalism’s cultural project entails pro-active recognition of a minimal package of cultural rights, and an equally vigorous rejection of the rest. The result is a dichotomy between recognised and recalcitrant indigenous subjects, which confronts the indigenous rights movement as a ‘ menace ’ even greater than the assimilationist policies of the previous era. It is suggested that the most effective response to this menace is probably not to engage in frontal opposition to neoliberal regimes, but rather to refuse the dichotomy altogether.}, + langid = {english}, + file = {/home/src/Offline/Papers/hale_2002_does multiculturalism menace.pdf} +} + +@misc{hall-cliffordEthicallyManagingRisks, + title = {Ethically {{Managing Risks}} in {{Global Health Fieldwork}}, {{Human Rights Ideals Confront Real World Challenges}}}, + author = {Hall-Clifford, Rachel and Cook-Deegan, Robert}, + publisher = {{Health and Human Rights}}, + file = {/home/src/Offline/Papers/hall-clifford_cook-deegan_ethically managing risks in global health fieldwork, human rights ideals.pdf} +} + +@misc{hall-cliffordMeTooMeetsGlobal, + title = {\#{{MeToo Meets Global Health}}, {{A Call}} to {{Action}}}, + author = {Hall-Clifford, Rachel}, + file = {/home/src/Offline/Papers/hall-clifford_#metoo meets global health, a call to action.pdf} +} + +@online{hall-cliffordSituatingGlobalHealth, + title = {Situating {{Global Health Fieldwork Ethics}} within the {{Right}} to {{Health}} – {{Health}} and {{Human Rights Journal}}}, + author = {Hall-Clifford, Rachel}, + url = {https://www.hhrjournal.org/2018/06/situating-global-health-fieldwork-ethics-within-the-right-to-health/}, + urldate = {2018-10-22}, + langid = {american}, + organization = {{Health and Human Rights Journal}}, + file = {/home/src/Offline/Papers/hall-clifford_situating global health fieldwork ethics within the right to health – health.pdf;/home/cedarprince/Zotero/storage/JRB6NYS9/situating-global-health-fieldwork-ethics-within-the-right-to-health.html} +} + +@article{hall-cliffordSustainableTechnologySurgical, + title = {Sustainable {{Technology}} for {{Surgical Referrals}}: {{Pilot Implementation}} of an {{Electronic Referral System}} for {{Short-Term Surgical Missions}}}, + author = {Hall-Clifford, Rachel and Roche, Stephanie and Fathima, Sana and Palmius, Niclas and Hollingworth, Kelly and Merida, Jasmin and Stephens, Meghan and Lavalley, Ryan and Rohloff, Peter and Garcia, Pablo and Patrick, Stephen and Clifford, Gari}, + pages = {26}, + abstract = {We present an investigation into the feasibility of implementing an electronic medical referral application for short-term surgical missions in rural Guatemala, where the local infrastructure does not support the demand for the surgery. An electronic referral application was implemented for Android smartphones and tablets which allowed the input, aggregation, and secure transmission of patient information that is currently collected on paper forms during surgical missions. The user interface and SMS text message-to-database feature allowed case management data to be entered and transmitted in real time. The referral application was piloted over a 3-day period with a collaborating NGO during a short-term surgical mission in rural Guatemala and was compared to the current standard-of-care paper medical record. This study also assessed the cell phone access and use of community attendees to identify the potential for communication with patients in an integrated electronic referral system. Participants in this study included nine medical mission staff members who used the referral application during the pilot, eight of whom took an end-user survey, 53 patients whose medical information was entered into the referral application, and 93 local attendees who participated in a community survey on cell phone usage. Overall, end-users expressed positive opinions of the application, which they found relatively easy to use. Data loss using the application was minimal in comparison to a 17\% permanent data loss of paper records, and the electronic medical records had high internal validity. Widespread cell phone use among community attendees suggests an opportunity to expand the referral application to further improve the surgical referral process.}, + langid = {english}, + file = {/home/src/Offline/Papers/hall-clifford et al_sustainable technology for surgical referrals.pdf} +} + +@article{hall2008compulsive, + title = {Compulsive, Self-Injurious, and Autistic Behavior in Children and Adolescents with Fragile {{X}} Syndrome}, + author = {Hall, Scott S and Lightbody, Amy A and Reiss, Allan L}, + date = {2008}, + journaltitle = {American Journal on Mental Retardation}, + shortjournal = {Am. J. Ment. Retard.}, + volume = {113}, + number = {1}, + pages = {44--53} +} + +@article{hallmayer2011genetic, + title = {Genetic Heritability and Shared Environmental Factors among Twin Pairs with Autism}, + author = {Hallmayer, Joachim and Cleveland, Sue and Torres, Andrea and Phillips, Jennifer and Cohen, Brianne and Torigoe, Tiffany and Miller, Janet and Fedele, Angie and Collins, Jack and Smith, Karen and others}, + date = {2011}, + journaltitle = {Archives of general psychiatry}, + shortjournal = {Arch. Gen. Psychiatry}, + volume = {68}, + number = {11}, + pages = {1095--1102}, + publisher = {{American Medical Association}} +} + +@article{hamlinMeasuringComplexityAutism2017, + title = {Measuring {{Complexity}} for {{Autism Interventions}}: {{Tcfd}}’s {{Inventory}} of {{Neuroeducational Complexity}}}, + shorttitle = {Measuring {{Complexity}} for {{Autism Interventions}}}, + author = {Hamlin, Theresa and Foster, Ennifer and Lantz, Johanna and Northrup, Matthew and Villavicencio, Tanya and Simeonson, Rune and Lollar, Donald}, + date = {2017}, + journaltitle = {Journal of Childhood \& Developmental Disorders}, + shortjournal = {J Childhood Devlopmental Disorders}, + volume = {03}, + number = {02}, + issn = {24721786}, + doi = {10.4172/2472-1786.100047}, + abstract = {Autism is a complex condition, whether viewed from etiology, comorbidities, functioning, or interventions. There are numerous approaches for measuring complexity in children and adolescents with neurodevelopmental or medical diagnoses. Interventions, however, create the need for broader and deeper assessment—including the environments in which the young person lives. The Center for Discovery, New York state’s Center of Excellence for Developmental Disabilities, (TCFD) implemented an Assessment, Support, Education and Training (ASSET) grant from the New York Office for People with Developmental Disabilities. This paper will describe the Assessment activity. A major goal was to develop a tool for assessing the characteristics of the young person and pivotal environments. The objective was to promote the delay of or prevent movement to a more restrictive placement including residential placement. The pilot tool was developed over nine months and includes six areas for evaluation—medical/ impairments (8 items), functional profile (11 items), educational profile (5 items), home/family environment (9 items), school environment (6 items), and community environment (4 items). Implementation of CfD’s Inventory of Neuroeducational Complexity (INC) was able to distinguish among 30 pilot subjects those likely to use family and school interventions to maintain family living from those most likely needing at least short term residential placement. The INC is of substantial heuristic value in this time of great interest in effective and resourcefocused interventions with this population.}, + langid = {english}, + keywords = {autism,center-for-discovery,read}, + file = {/home/src/Offline/Papers/hamlin et al_2017_measuring complexity for autism interventions.pdf} +} + +@report{hammCultivatingEntrepreneurialEcosystem2020, + title = {Cultivating an {{Entrepreneurial Ecosystem}}: {{Replicating Israeli Science}}, {{Technology}}, and {{Innovation}} ({{STI}}) {{Best Practices}} in {{Egypt}} and {{Jordan}}}, + author = {Hamm, Elisia}, + date = {2020}, + file = {/home/src/Papers/hamm_2020_cultivating an entrepreneurial ecosystem.pdf} +} + +@book{hammingArtDoingScience2014, + title = {Art of {{Doing Science}} and {{Engineering Learning}} to {{Learn}}}, + author = {Hamming, Richard R}, + date = {2014}, + publisher = {{CRC Press}}, + location = {{Hoboken}}, + abstract = {1. Foundations of the Digital (Discrete) Revolution 2. History of Computer Hardware 3. History of Computer Software 4. History of Computer Applications 5. Limits of Computer Applications - AI - I 6. Limits of Computer Applications - AI - III 7. N-Dimensional Space 8. Coding Theory - I 9. Error Correcting Codes 10. Information Theory 11. Digital Filters - I 12. Digital Filters - III 13. Digital Filters - IV 14. Simulation I 15. Simulation II 16. Simulation III 17. Fiber Optics 18. Limits of Computer Applications - AI - II 19. Coding Theory - II 20. Digital Filters - II 21. Creativity 22. You Ge ...}, + isbn = {978-90-5699-501-0 978-0-203-45071-0}, + langid = {english}, + keywords = {_tablet_modified}, + annotation = {OCLC: 911177668}, + file = {/home/cedarprince/Zotero/storage/X96QUMR7/Hamming - 2014 - Art of Doing Science and Engineering Learning to L.pdf} +} + +@article{hancock2013search, + title = {In Search of Vigilance: The Problem of Iatrogenically Created Psychological Phenomena.}, + author = {Hancock, Peter A}, + date = {2013}, + journaltitle = {American Psychologist}, + shortjournal = {Am. Psychol.}, + volume = {68}, + number = {2}, + pages = {97}, + publisher = {{American Psychological Association}} +} + +@report{hanIncomePovertyCOVID192020, + title = {Income and {{Poverty}} in the {{COVID-19 Pandemic}}}, + author = {Han, Jeehoon and Meyer, Bruce and Sullivan, James}, + date = {2020-08}, + number = {w27729}, + pages = {w27729}, + institution = {{National Bureau of Economic Research}}, + location = {{Cambridge, MA}}, + doi = {10.3386/w27729}, + abstract = {This paper addresses the economic impact of the COVID-19 pandemic by providing timely and accurate information on the impact of the current pandemic on income and poverty to inform the targeting of resources to those most affected and assess the success of current efforts. We construct new measures of the income distribution and poverty with a lag of only a few weeks using high frequency data from the Basic Monthly Current Population Survey (CPS), which collects income information for a large, representative sample of U.S. families. Because the family income data for this project are rarely used, we validate this timely measure of income by comparing historical estimates that rely on these data to estimates from data on income and consumption that have been used much more broadly. Our results indicate that at the start of the pandemic, government policy effectively countered its effects on incomes, leading poverty to fall and low percentiles of income to rise across a range of demographic groups and geographies. Simulations that rely on the detailed CPS data and that closely match total government payments made show that the entire decline in poverty that we find can be accounted for by the rise in government assistance, including unemployment insurance benefits and the Economic Impact Payments. Our simulations further indicate that of those losing employment the vast majority received unemployment insurance, though this was less true early on in the pandemic and receipt was uneven across the states, with some states not reaching a large share of their out of work residents.}, + langid = {english}, + file = {/home/src/Papers/han et al_2020_income and poverty in the covid-19 pandemic.pdf} +} + +@article{harlow1998if, + title = {What If There Were No Significance Tests}, + author = {Harlow, Lisa L and Mulaik, Stanley A and Steiger, James H}, + date = {1998}, + publisher = {{SAGE PUBLICATIONS INC 2455 TELLER RD, THOUSAND OAKS, CA 91320 USA}} +} + +@book{hartsfieldPearlsGraphTheory1994, + title = {Pearls in {{Graph Theory A Comprehensive Introduction}}}, + author = {Hartsfield, Nora and Ringel}, + date = {1994}, + publisher = {{DOVER PUBLICATIONS, INC.}}, + keywords = {_tablet}, + file = {/home/cedarprince/Zotero/storage/87P9KAEG/[Dover Books on Mathematics] Nora Hartsfield, Gerhard Ringel, Mathematics - Pearls in Graph Theory_ A Comprehensive Introduction (2003, Dover Publications) - libgen.li.epub} +} + +@online{harvardhealthpublishingUnderstandingStressResponse, + title = {Understanding the Stress Response}, + author = {{Harvard Health Publishing}}, + langid = {english}, + file = {/home/src/Offline/Papers/harvard health publishing_understanding the stress response.pdf} +} + +@article{hassonjee2007textile, + title = {Textile-Based Electrode System}, + author = {Hassonjee, Qaizar N and Cera, Juan and Bartecki, Robert-Michael and Micka, Thomas A and Schultze, Claudia and Burr, Stacey B and Karayianni, Eleni}, + date = {2007-12-11}, + publisher = {{Google Patents}} +} + +@book{haverbekeEloquentJavascript2018, + title = {Eloquent {{Javascript}}}, + author = {Haverbeke, Marijn}, + date = {2018}, + edition = {3rd}, + file = {/home/src/Offline/Papers/haverbeke_2018_eloquent javascript.pdf} +} + +@article{havercamp2015national, + title = {National Health Surveillance of Adults with Disabilities, Adults with Intellectual and Developmental Disabilities, and Adults with No Disabilities}, + author = {Havercamp, Susan M and Scott, Haleigh M}, + date = {2015}, + journaltitle = {Disability and Health Journal}, + shortjournal = {Disabil. Health J.}, + volume = {8}, + number = {2}, + pages = {165--172}, + publisher = {{Elsevier}} +} + +@article{haWearableCognitiveAssistance, + title = {Towards {{Wearable Cognitive Assistance}}}, + author = {Ha, Kiryong and Chen, Zhuo and Hu, Wenlu and Richter, Wolfgang and Pillai, Padmanabhan and Satyanarayanan, Mahadev}, + pages = {26}, + abstract = {We describe the architecture and prototype implementation of an assistive system based on Google Glass devices for users in cognitive decline. It combines the first-person image capture and sensing capabilities of Glass with cloud processing to perform real-time scene interpretation. The system architecture is multi-tiered. It offers tight end-to-end latency bounds on compute-intensive operations, while addressing concerns such as limited battery capacity and limited processing capability of wearable devices. The system gracefully degrades services in the face of network failures and unavailability of distant architectural tiers.}, + langid = {english}, + file = {/home/src/Offline/Papers/ha et al_towards wearable cognitive assistance.pdf} +} + +@misc{hawleySocialMediaAddiction2019, + title = {Social {{Media Addiction Reduction Technology Act}}}, + author = {Hawley, Josh}, + date = {2019}, + file = {/home/src/Offline/Papers/hawley_2019_social media addiction reduction technology act.pdf} +} + +@article{hazelriggHONINGYOURPROPOSAL, + title = {{{HONING YOUR PROPOSAL WRITING SKILLS}}}, + author = {Hazelrigg, George A}, + pages = {3}, + langid = {english}, + file = {/home/src/Offline/Papers/hazelrigg_honing your proposal writing skills.pdf} +} + +@article{he2020temporal, + title = {Temporal Dynamics in Viral Shedding and Transmissibility of {{COVID-19}}}, + author = {He, Xi and Lau, Eric HY and Wu, Peng and Deng, Xilong and Wang, Jian and Hao, Xinxin and Lau, Yiu Chung and Wong, Jessica Y and Guan, Yujuan and Tan, Xinghua and others}, + date = {2020}, + journaltitle = {Nature medicine}, + shortjournal = {Nat. Med.}, + volume = {26}, + number = {5}, + pages = {672--675}, + publisher = {{Nature Publishing Group}} +} + +@online{HealthCareGlobal2020, + title = {U.{{S}}. {{Health Care}} from a {{Global Perspective}}, 2019: {{Higher Spending}}, {{Worse Outcomes}}?}, + shorttitle = {U.{{S}}. {{Health Care}} from a {{Global Perspective}}, 2019}, + date = {2020-01-30}, + doi = {10.26099/7avy-fc29}, + abstract = {Americans are living shorter, unhealthier lives. Yet, the United States outspends other wealthy nations when it comes to health care, according to a new Commonwealth Fund report. This analysis compares the U.S. to 10 other high-income nations on spending, outcomes, risk factors, and quality.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/UCDP2FK4/us-health-care-global-perspective-2019.html} +} + +@article{healyItBabyComing2018, + title = {It’s 4 {{A}}.{{M}}. {{The Baby}}’s {{Coming}}. {{But}} the {{Hospital Is}} 100 {{Miles Away}}.}, + author = {Healy, Jack}, + date = {2018-07-17}, + journaltitle = {The New York Times}, + url = {https://www.nytimes.com/2018/07/17/us/hospital-closing-missouri-pregnant.html}, + entrysubtype = {newspaper}, + file = {/home/src/Offline/Papers/healy_2018_it’s 4 a.pdf} +} + +@online{HebbianTheory2020, + title = {Hebbian {{Theory}}}, + date = {2020}, + organization = {{Wikipedia}}, + file = {/home/src/Offline/Papers/2020_hebbian theory.pdf} +} + +@article{hedden2012comparison, + title = {Comparison of {{NSDUH}} Mental Health Data and Methods with Other Data Sources}, + author = {Hedden, Sarra and Gfroerer, Joe and Barker, Peggy and Smith, Shelagh and Pemberton, Michael R and Saavedra, Lissette M and Forman-Hoffman, Valerie L and Ringeisen, Heather and Novak, Scott P}, + date = {2012}, + journaltitle = {CBHSQ Data Review}, + shortjournal = {CBHSQ Data Rev.}, + publisher = {{Substance Abuse and Mental Health Services Administration (US)}} +} + +@article{heestermansPrognosticModelsAdverse2019, + title = {Prognostic Models for Adverse Pregnancy Outcomes in Low-Income and Middle-Income Countries: A Systematic Review}, + shorttitle = {Prognostic Models for Adverse Pregnancy Outcomes in Low-Income and Middle-Income Countries}, + author = {Heestermans, Tessa and Payne, Beth and Kayode, Gbenga Ayodele and Amoakoh-Coleman, Mary and Schuit, Ewoud and Rijken, Marcus J and Klipstein-Grobusch, Kerstin and Bloemenkamp, Kitty and Grobbee, Diederick E and Browne, Joyce L}, + date = {2019-10}, + journaltitle = {BMJ Global Health}, + shortjournal = {BMJ Glob Health}, + volume = {4}, + number = {5}, + pages = {e001759}, + issn = {2059-7908}, + doi = {10.1136/bmjgh-2019-001759}, + abstract = {Introduction\hspace{0.6em} Ninety-­nine per cent of all maternal and neonatal deaths occur in low-­income and middle-­ income countries (LMIC). Prognostic models can provide standardised risk assessment to guide clinical management and can be vital to reduce and prevent maternal and perinatal mortality and morbidity. This review provides a comprehensive summary of prognostic models for adverse maternal and perinatal outcomes developed and/or validated in LMIC. Methods\hspace{0.6em} A systematic search in four databases (PubMed/ Medline, EMBASE, Global Health Library and The Cochrane Library) was conducted from inception (1970) up to 2 May 2018. Risk of bias was assessed with the PROBAST tool and narratively summarised. Results\hspace{0.6em} 1741 articles were screened and 21 prognostic models identified. Seventeen models focused on maternal outcomes and four on perinatal outcomes, of which hypertensive disorders of pregnancy (n=9) and perinatal death including stillbirth (n=4) was most reported. Only one model was externally validated. Thirty different predictors were used to develop the models. Risk of bias varied across studies, with the item ‘quality of analysis’ performing the least. Conclusion\hspace{0.6em} Prognostic models can be easy to use, informative and low cost with great potential to improve maternal and neonatal health in LMIC settings. However, the number of prognostic models developed or validated in LMIC settings is low and mirrors the 10/90 gap in which only 10\% of resources are dedicated to 90\% of the global disease burden. External validation of existing models developed in both LMIC and high-­income countries instead of developing new models should be encouraged. PROSPERO registration number\hspace{0.6em} CRD42017058044.}, + langid = {english}, + file = {/home/src/Papers/heestermans et al_2019_prognostic models for adverse pregnancy outcomes in low-income and.pdf} +} + +@article{hegdeAutoTriageOpenSource2020, + title = {{{AutoTriage}} - {{An Open Source Edge Computing Raspberry Pi-based Clinical Screening System}}}, + author = {Hegde, Chaitra and Suresha, Pradyumna Byappanahalli and Zelko, Jacob and Jiang, Zifan and Kamaleswaran, Rishikesan and Reyna, Matt A. and Clifford, Gari D.}, + date = {2020-04-11}, + journaltitle = {medRxiv}, + pages = {2020.04.09.20059840}, + publisher = {{Cold Spring Harbor Laboratory Press}}, + doi = {10.1101/2020.04.09.20059840}, + abstract = {{$<$}p{$>$}With the recent COVID-19 pandemic, healthcare systems all over the world are struggling to manage the massive increase in emergency department (ED) visits. This has put an enormous demand on medical professionals. Increased wait times in the ED increases the risk of infection transmission. In this work we present an open-source, low cost, off-body system to assist in the automatic triage of patients in the ED based on widely available hardware. The system initially focuses on two symptoms of the infection - fever and cyanosis. The use of visible and far-infrared cameras allows for rapid assessment at a 1m distance, thus reducing the load on medical staff and lowering the risk of spreading the infection within hospitals. Its utility can be extended to a general clinical setting in non-emergency times as well to reduce wait time, channel the time and effort of healthcare professionals to more critical tasks and also prioritize severe cases. Our system consists of a Raspberry Pi 4, a Google Coral USB accelerator, a Raspberry Pi Camera v2 and a FLIR Lepton 3.5 Radiometry Long-Wave Infrared Camera with an associated IO module. Algorithms running in real-time detect the presence and body parts of individual(s) in view, and segments out the forehead and lip regions using PoseNet. The temperature of the forehead-eye area is estimated from the infrared camera image and cyanosis is assessed from the image of the lips in the visible spectrum. In our preliminary experiments, an accuracy of 97\% was achieved for detecting fever and 77\% for the detection of cyanosis, with a sensitivity of 91\% and area under the receiver operating characteristic curve of 0.91. Although preliminary results are promising, we note that the entire system needs to be optimized before use and assessed for efficacy. The use of low-cost instrumentation will not produce temperature readings and identification of cyanosis that is acceptable in many situations. For this reason, we are releasing the full code stack and system design to allow others to rapidly iterate and improve the system. This may be of particular benefit in low-resource settings, and low-to-middle income countries in particular, which are just beginning to be affected by COVID-19.{$<$}/p{$>$}}, + langid = {english}, + file = {/home/src/Offline/Papers/hegde et al_2020_autotriage - an open source edge computing raspberry pi-based clinical.pdf;/home/cedarprince/Zotero/storage/J5QIVBTM/2020.04.09.html} +} + +@article{hellewell2020feasibility, + title = {Feasibility of Controlling {{COVID-19}} Outbreaks by Isolation of Cases and Contacts}, + author = {Hellewell, Joel and Abbott, Sam and Gimma, Amy and Bosse, Nikos I and Jarvis, Christopher I and Russell, Timothy W and Munday, James D and Kucharski, Adam J and Edmunds, W John and Sun, Fiona and others}, + date = {2020}, + journaltitle = {The Lancet Global Health}, + shortjournal = {Lancet Glob. Health}, + publisher = {{Elsevier}} +} + +@article{hellewell2020feasibility, + title = {Feasibility of Controlling {{COVID-19}} Outbreaks by Isolation of Cases and Contacts}, + author = {Hellewell, Joel and Abbott, Sam and Gimma, Amy and Bosse, Nikos I and Jarvis, Christopher I and Russell, Timothy W and Munday, James D and Kucharski, Adam J and Edmunds, W John and Sun, Fiona and others}, + date = {2020}, + journaltitle = {The Lancet Global Health}, + shortjournal = {Lancet Glob. Health}, + publisher = {{Elsevier}} +} + +@article{helton2008signal, + title = {Signal Salience and the Mindlessness Theory of Vigilance}, + author = {Helton, William S and Warm, Joel S}, + date = {2008}, + journaltitle = {Acta psychologica}, + shortjournal = {Acta Psychol. (Amst.)}, + volume = {129}, + number = {1}, + pages = {18--25}, + publisher = {{Elsevier}} +} + +@article{heltonRestBestRole2015, + title = {Rest Is Best: {{The}} Role of Rest and Task Interruptions on Vigilance}, + shorttitle = {Rest Is Best}, + author = {Helton, William S. and Russell, Paul N.}, + date = {2015-01}, + journaltitle = {Cognition}, + shortjournal = {Cognition}, + volume = {134}, + pages = {165--173}, + issn = {00100277}, + doi = {10.1016/j.cognition.2014.10.001}, + abstract = {We examined the impact task interruptions have on visuospatial vigilance in two experiments. In the first experiment participants were randomly assigned to one of three interruptions: participants were given a complete rest (rest), participants completed an alphanumeric vigilance task (letter), or participants performed the primary vigilance task (continuous). In the second experiment participants were randomly assigned to one of the conditions from the first experiment or to two further conditions, in which participants (spatial memory) performed a spatial match to sample task, or participants (verbal memory) performed a letter match to sample task. Vigilance performance post-interruption was best for rest, worst for continuous, and varied for the other interruption tasks. Overall, the results suggest the vigilance decrement is due to the repeated use of particular executive resources, but there may, in addition be domain specific interference when the primary task and activities during a break make use of the same resources.}, + langid = {english}, + file = {/home/src/Offline/Papers/helton_russell_2015_rest is best.pdf} +} + +@article{herendeen2014telemedicine, + title = {Telemedicine and the Patient-Centered Medical Home}, + author = {Herendeen, Neil and Deshpande, Prashant}, + date = {2014}, + journaltitle = {Pediatric annals}, + shortjournal = {Pediatr. Ann.}, + volume = {43}, + number = {2}, + pages = {e28--e32}, + publisher = {{SLACK Incorporated Thorofare, NJ}} +} + +@incollection{hernandezCallCenterStress2011, + title = {Call {{Center Stress Recognition}} with {{Person-Specific Models}}}, + booktitle = {Affective {{Computing}} and {{Intelligent Interaction}}}, + author = {Hernandez, Javier and Morris, Rob R. and Picard, Rosalind W.}, + editor = {D’Mello, Sidney and Graesser, Arthur and Schuller, Björn and Martin, Jean-Claude}, + date = {2011}, + series = {Lecture {{Notes}} in {{Computer Science}}}, + volume = {6974}, + pages = {125--134}, + publisher = {{Springer Berlin Heidelberg}}, + location = {{Berlin, Heidelberg}}, + doi = {10.1007/978-3-642-24600-5_16}, + abstract = {Nine call center employees wore a skin conductance sensor on the wrist for a week at work and reported stress levels of each call. Although everyone had the same job profile, we found large differences in how individuals reported stress levels, with similarity from day to day within the same participant, but large differences across the participants. We examined two ways to address the individual differences to automatically recognize classes of stressful/non-stressful calls, namely modifying the loss function of Support Vector Machines (SVMs) to adapt to the varying priors, and giving more importance to training samples from the most similar people in terms of their skin conductance lability. We tested the methods on 1500 calls and achieved an accuracy across participants of 78.03\% when trained and tested on different days from the same person, and of 73.41\% when trained and tested on different people using the proposed adaptations to SVMs.}, + isbn = {978-3-642-24599-2 978-3-642-24600-5}, + langid = {english}, + file = {/home/src/Offline/Papers/hernandez et al_2011_call center stress recognition with person-specific models.pdf} +} + +@online{HighPrecisionTiming, + title = {High {{Precision Timing}} of {{R Expressions}} • Bench}, + url = {https://bench.r-lib.org/}, + urldate = {2021-08-13} +} + +@article{hightower2001location, + title = {Location Systems for Ubiquitous Computing}, + author = {Hightower, Jeffrey and Borriello, Gaetano}, + date = {2001}, + journaltitle = {Computer}, + volume = {34}, + number = {8}, + pages = {57--66}, + publisher = {{IEEE}}, + file = {/home/src/Offline/Papers/hightower_borriello_2001_location systems for ubiquitous computing.pdf} +} + +@article{hill1994longitudinal, + title = {A Longitudinal Analysis of Predictors of Quitting Smoking among Participants in a Self-Help Intervention Trial}, + author = {Hill, Holly A and Schoenbach, Victor J and Kleinbaum, David G and Strecher, Victor J and Orleans, C Tracy and Gebski, Val J and Kaplan, Berton H}, + date = {1994}, + journaltitle = {Addictive Behaviors}, + shortjournal = {Addict. Behav.}, + volume = {19}, + number = {2}, + pages = {159--173}, + publisher = {{Elsevier}} +} + +@article{hinch2020effective, + title = {Effective Configurations of a Digital Contact Tracing App: {{A}} Report to {{NHSX}}}, + author = {Hinch, Robert and Probert, W and Nurtay, A and Kendall, M and Wymant, C and Hall, Matthew and Fraser, C}, + date = {2020}, + journaltitle = {en. In:(Apr. 2020). Available here. url: https://github. com/BDI-pathogens/covid-19\_instant\_tracing/blob/master/Report}, + shortjournal = {En InApr 2020 Available Here Url Httpsgithub ComBDI-Pathog.-19instanttracingblobmasterReport} +} + +@article{hintze1998violin, + title = {Violin Plots: A Box Plot-Density Trace Synergism}, + author = {Hintze, Jerry L and Nelson, Ray D}, + date = {1998}, + journaltitle = {The American Statistician}, + shortjournal = {Am. Stat.}, + volume = {52}, + number = {2}, + pages = {181--184}, + publisher = {{Taylor \& Francis}} +} + +@article{hintzman1974theoretical, + title = {Theoretical Implications of the Spacing Effect.}, + author = {Hintzman, Douglas L}, + date = {1974}, + publisher = {{Lawrence Erlbaum}} +} + +@article{homanStructuralIntersectionalityNew2021, + title = {Structural {{Intersectionality}} as a {{New Direction}} for {{Health Disparities Research}}}, + author = {Homan, Patricia and Brown, Tyson H. and King, Brittany}, + date = {2021-09}, + journaltitle = {Journal of Health and Social Behavior}, + shortjournal = {J Health Soc Behav}, + volume = {62}, + number = {3}, + pages = {350--370}, + issn = {0022-1465, 2150-6000}, + doi = {10.1177/00221465211032947}, + abstract = {This article advances the field by integrating insights from intersectionality perspectives with the emerging literatures on structural racism and structural sexism—which point to promising new ways to measure systems of inequality at a macro level—to introduce a structural intersectionality approach to population health. We demonstrate an application of structural intersectionality using administrative data representing macrolevel structural racism, structural sexism, and income inequality in U.S. states linked to individual data from the Behavioral Risk Factor Surveillance System to estimate multilevel models (N = 420,644 individuals nested in 76 state-years) investigating how intersecting dimensions of structural oppression shape health. Analyses show that these structural inequalities: (1) vary considerably across U.S. states, (2) intersect in numerous ways but do not strongly or positively covary, (3) individually and jointly shape health, and (4) are most consistently associated with poor health for black women. We conclude by outlining an agenda for future research on structural intersectionality and health.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/K9R4Z93S/Homan et al_2021_Structural Intersectionality as a New Direction for Health Disparities Research.pdf} +} + +@video{HowMakeSIMPLE, + title = {How to {{Make}} a {{SIMPLE Bullet Journal}} ({{Really}})}, + url = {https://www.youtube.com/watch?v=YGjWjRTf6MY}, + urldate = {2020-03-18}, + abstract = {Leave your Washi Tape at home! Check out my list of journal recommendations here!! https://www.amazon.co.uk/shop/liamdryden TWITCH: http://twitch.tv/liamdryden DISCORD: [invite rescinded this was a mistake lmao] PATREON: https://www.patreon.com/LiamDryden THE REST: http://liamdryden.com \_\_ Hello, I'm Liam Dryden! I've been a YouTuber for 10 years, a Twitch streamer for about 10 minutes, and have roughly 10 podcast ideas I'd love to get off the ground. None of these things would be worth doing without the awesome community I've been building this whole time, so join us!} +} + +@online{HowUsedAnki2021, + title = {How {{I}} Used {{Anki}} for Math}, + date = {2021-06-30}, + url = {https://www.reddit.com/r/Anki/comments/oaw03c/how_i_used_anki_for_math/}, + urldate = {2023-01-09}, + organization = {{Reddit}} +} + +@article{hripcsak2015observational, + title = {Observational Health Data Sciences and Informatics ({{OHDSI}}): Opportunities for Observational Researchers}, + author = {Hripcsak, George and Duke, Jon D and Shah, Nigam H and Reich, Christian G and Huser, Vojtech and Schuemie, Martijn J and Suchard, Marc A and Park, Rae Woong and Wong, Ian Chi Kei and Rijnbeek, Peter R and others}, + date = {2015}, + journaltitle = {Studies in health technology and informatics}, + shortjournal = {Stud. Health Technol. Inform.}, + volume = {216}, + pages = {574}, + publisher = {{NIH Public Access}} +} + +@article{huguet2013genetic, + title = {The Genetic Landscapes of Autism Spectrum Disorders}, + author = {Huguet, Guillaume and Ey, Elodie and Bourgeron, Thomas}, + date = {2013}, + journaltitle = {Annual review of genomics and human genetics}, + shortjournal = {Annu. Rev. Genomics Hum. Genet.}, + volume = {14}, + pages = {191--213}, + publisher = {{Annual Reviews}} +} + +@inproceedings{huh2014weaving, + title = {Weaving Clinical Expertise in Online Health Communities}, + booktitle = {Proceedings of the {{SIGCHI}} Conference on Human Factors in Computing Systems}, + author = {Huh, Jina and Pratt, Wanda}, + date = {2014}, + pages = {1355--1364} +} + +@article{huppertCAMCOGAConciseNeuropsychological1995, + title = {{{CAMCOG-A}} Concise Neuropsychological Test to Assist Dementia Diagnosis: {{Socio-demographic}} Determinants in an Elderly Population Sample}, + shorttitle = {{{CAMCOG-A}} Concise Neuropsychological Test to Assist Dementia Diagnosis}, + author = {Huppert, Felicia A. and Brayne, Carol and Gill, Caroline and Paykel, E. S. and Beardsall, Lynn}, + date = {1995-11}, + journaltitle = {British Journal of Clinical Psychology}, + shortjournal = {Br. J. Clin. Psychol.}, + volume = {34}, + number = {4}, + pages = {529--541}, + issn = {01446657}, + doi = {10.1111/j.2044-8260.1995.tb01487.x}, + langid = {english}, + file = {/home/src/Offline/Papers/huppert et al_1995_camcog-a concise neuropsychological test to assist dementia diagnosis.pdf} +} + +@article{hutchison2013dynamic, + title = {Dynamic Functional Connectivity: Promise, Issues, and Interpretations}, + author = {Hutchison, R Matthew and Womelsdorf, Thilo and Allen, Elena A and Bandettini, Peter A and Calhoun, Vince D and Corbetta, Maurizio and Della Penna, Stefania and Duyn, Jeff H and Glover, Gary H and Gonzalez-Castillo, Javier and others}, + date = {2013}, + journaltitle = {Neuroimage}, + volume = {80}, + pages = {360--378}, + publisher = {{Elsevier}} +} + +@online{huyenIntroductionStreamingData2022, + title = {Introduction to Streaming for Data Scientists}, + author = {Huyen, Chip}, + date = {2022-08-03}, + url = {https://huyenchip.com//2022/08/03/stream-processing-for-data-scientists.html}, + urldate = {2022-09-02}, + file = {/home/cedarprince/Zotero/storage/TCPH4N5V/Introduction to streaming for data scientists.pdf;/home/cedarprince/Zotero/storage/FSY8F3Q8/stream-processing-for-data-scientists.html} +} + +@article{iachanNationalWeightingData2016, + title = {National Weighting of Data from the {{Behavioral Risk Factor Surveillance System}} ({{BRFSS}})}, + author = {Iachan, Ronaldo and Pierannunzi, Carol and Healey, Kristie and Greenlund, Kurt J. and Town, Machell}, + date = {2016-12}, + journaltitle = {BMC Medical Research Methodology}, + shortjournal = {BMC Med Res Methodol}, + volume = {16}, + number = {1}, + pages = {155}, + issn = {1471-2288}, + doi = {10.1186/s12874-016-0255-7}, + abstract = {Background: The Behavioral Risk Factor Surveillance System (BRFSS) is a network of health-related telephone surveys–conducted by all 50 states, the District of Columbia, and participating US territories—that receive technical assistance from CDC. Data users often aggregate BRFSS state samples for national estimates without accounting for state-level sampling, a practice that could introduce bias because the weighted distributions of the state samples do not always adhere to national demographic distributions. Methods: This article examines six methods of reweighting, which are then compared with key health indicator estimates from the National Health Interview Survey (NHIS) based on 2013 data. Results: Compared to the usual stacking approach, all of the six new methods reduce the variance of weights and design effect at the national level, and some also reduce the estimated bias. This article also provides a comparison of the methods based on the variances induced by unequal weighting as well as the bias reduction induced by raking at the national level, and recommends a preferred method. Conclusions: The new method leads to weighted distributions that more accurately reproduce national demographic characteristics. While the empirical results for key estimates were limited to a few health indicators, they also suggest reduction in potential bias and mean squared error. To the extent that survey outcomes are associated with these demographic characteristics, matching the national distributions will reduce bias in estimates of these outcomes at the national level.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/RJYXAL64/Iachan et al. - 2016 - National weighting of data from the Behavioral Ris.pdf} +} + +@online{ICalmSensorPhysiio, + title = {From {{iCalm}} to {{Q Sensor}} to {{Physiio}} to {{Empatica}}}, + url = {https://affect.media.mit.edu/projectpages/iCalm/iCalm-2-Q.html}, + urldate = {2020-04-26}, + file = {/home/cedarprince/Zotero/storage/YMGNA4XI/iCalm-2-Q.html} +} + +@article{ihaka1996r, + title = {R: A Language for Data Analysis and Graphics}, + author = {Ihaka, Ross and Gentleman, Robert}, + date = {1996}, + journaltitle = {Journal of computational and graphical statistics}, + shortjournal = {J. Comput. Graph. Stat.}, + volume = {5}, + number = {3}, + pages = {299--314}, + publisher = {{Taylor \& Francis Group}} +} + +@online{ImageAnkle, + title = {Image of {{Ankle}}}, + url = {https://images-na.ssl-images-amazon.com/images/I/611Or%2BXb7JL._AC_SX425_.jpg}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/I3YNX5GH/611Or+Xb7JL._AC_SX425_.html} +} + +@online{InaccuraciesMedicareRace, + title = {Inaccuracies in {{Medicare}}'s {{Race}} and {{Ethnicity Data Hinder}} the {{Ability To Assess Health Disparities}}}, + url = {https://oig.hhs.gov/oei/reports/OEI-02-21-00100.asp}, + urldate = {2022-06-24}, + abstract = {Medicare's enrollment race and ethnicity data are less accurate for some groups, particularly for beneficiaries identified as American Indian/Alaska Native, Asian/Pacific Islander, or Hispanic.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/BCUS4ST5/OEI-02-21-00100.html} +} + +@online{industriesAdafruitBluefruitUART, + title = {Adafruit {{Bluefruit LE UART Friend}} - {{Bluetooth Low Energy}} ({{BLE}})}, + author = {Industries, Adafruit}, + url = {https://www.adafruit.com/product/2479}, + urldate = {2020-02-11}, + abstract = {Would you like to add powerful and easy-to-use Bluetooth Low Energy to your robot, art or other electronics project? Heck yeah! With BLE now included in modern smart phones and tablets, its ...}, + file = {/home/cedarprince/Zotero/storage/C3WA7LSM/2479.html} +} + +@article{intille2004new, + title = {A New Research Challenge: Persuasive Technology to Motivate Healthy Aging}, + author = {Intille, Stephen S}, + date = {2004}, + journaltitle = {IEEE Transactions on information technology in Biomedicine}, + shortjournal = {IEEE Trans. Inf. Technol. Biomed.}, + volume = {8}, + number = {3}, + pages = {235--237}, + publisher = {{IEEE}}, + keywords = {\#nosource} +} + +@article{irimia2012circular, + title = {Circular Representation of Human Cortical Networks for Subject and Population-Level Connectomic Visualization}, + author = {Irimia, Andrei and Chambers, Micah C and Torgerson, Carinna M and Van Horn, John D}, + date = {2012}, + journaltitle = {Neuroimage}, + volume = {60}, + number = {2}, + pages = {1340--1351}, + publisher = {{Elsevier}} +} + +@misc{isaacasimovYoRobot1950, + title = {Yo, robot}, + author = {{Isaac Asimov}}, + date = {1950}, + langid = {spanish}, + file = {/home/src/Offline/Papers/isaac asimov_1950_yo, robot.pdf} +} + +@article{itrat2016telemedicine, + title = {Telemedicine in Prehospital Stroke Evaluation and Thrombolysis: Taking Stroke Treatment to the Doorstep}, + author = {Itrat, Ahmed and Taqui, Ather and Cerejo, Russell and Briggs, Farren and Cho, Sung-Min and Organek, Natalie and Reimer, Andrew P and Winners, Stacey and Rasmussen, Peter and Hussain, Muhammad S and others}, + date = {2016}, + journaltitle = {JAMA neurology}, + shortjournal = {JAMA Neurol.}, + volume = {73}, + number = {2}, + pages = {162--168}, + publisher = {{American Medical Association}} +} + +@article{Ivorra_2008, + title = {Minimally Obtrusive Wearable Device for Continuous Interactive Cognitive and Neurological Assessment}, + author = {Ivorra, Antoni and Daniels, Charlotte and Rubinsky, Boris}, + date = {2008-04}, + journaltitle = {Physiological Measurement}, + shortjournal = {Physiol. Meas.}, + volume = {29}, + number = {5}, + pages = {543--554}, + publisher = {{IOP Publishing}}, + doi = {10.1088/0967-3334/29/5/002}, + abstract = {This study demonstrates the feasibility of a minimally obtrusive wearable system that can assess cognitive performance continuously throughout normal life activities by excitation of the peripheral nervous system and detection of the central nervous system response. The new concept was tested with one possible implementation as a device the size of a wristwatch which interrogates the subject by means of haptic excitation (vibration) and records the responses (subtle hand movements detected by accelerometers). The system was programmed to perform simple reaction time trials and was tested with ten volunteers during 8 h of their normal daytime activities. Results indicate that the volunteers responded properly to most of the interrogations (¿95\%) and that the impact of the device on everyday activities was not significant. The ability to assess cognitive capabilities of individuals continuously during everyday activities could have far-reaching implications for diagnostics and treatment of many different neurological conditions.}, + file = {/home/src/Offline/Papers/ivorra et al_2008_minimally obtrusive wearable device for continuous interactive cognitive and.pdf} +} + +@article{iwata1994toward, + title = {Toward a Functional Analysis of Self-Injury}, + author = {Iwata, Brian A and Dorsey, Michael F and Slifer, Keith J and Bauman, Kenneth E and Richman, Gina S}, + date = {1994}, + journaltitle = {Journal of applied behavior analysis}, + shortjournal = {J. Appl. Behav. Anal.}, + volume = {27}, + number = {2}, + pages = {197--209}, + publisher = {{Wiley Online Library}} +} + +@online{JackAllTrades, + title = {Jack of {{All Trades}} in {{Impedance Measurement}} | {{Analog Devices}}}, + url = {https://www.analog.com/en/technical-articles/jack-of-all-trades-in-impedance-measurement.html}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/G8EQKRVD/jack-of-all-trades-in-impedance-measurement.html} +} + +@inproceedings{jacobs2014my, + title = {My Journey Compass: A Preliminary Investigation of a Mobile Tool for Cancer Patients}, + booktitle = {Proceedings of the {{SIGCHI}} Conference on Human Factors in Computing Systems}, + author = {Jacobs, Maia L and Clawson, James and Mynatt, Elizabeth D}, + date = {2014}, + pages = {663--672} +} + +@article{jacobsMyPathInvestigatingBreast2018, + title = {{{MyPath}}: {{Investigating Breast Cancer Patients}}' {{Use}} of {{Personalized Health Information}}}, + shorttitle = {{{MyPath}}}, + author = {Jacobs, Maia and Johnson, Jeremy and Mynatt, Elizabeth D.}, + date = {2018-11}, + journaltitle = {Proceedings of the ACM on Human-Computer Interaction}, + shortjournal = {Proc. ACM Hum.-Comput. Interact.}, + volume = {2}, + pages = {1--21}, + issn = {2573-0142, 2573-0142}, + doi = {10.1145/3274347}, + issue = {CSCW}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/jacobs et al_2018_mypath.pdf} +} + +@article{jain2014continuous, + title = {Continuous Monitoring of Stress Using Accelerometer Data}, + author = {Jain, Jawahar and Marvit, David Loren and Adler, B Thomas and Balakrishnan, Rajalakshmi and Gilman, Alexander and Stergiou, Stergios}, + date = {2014-01-07}, + publisher = {{Google Patents}} +} + +@article{jainGuidingIntracorticalBrain2014, + title = {Guiding Intracortical Brain Tumour Cells to an Extracortical Cytotoxic Hydrogel Using Aligned Polymeric Nanofibres}, + author = {Jain, Anjana and Betancur, Martha and Patel, Gaurangkumar D. and Valmikinathan, Chandra M. and Mukhatyar, Vivek J. and Vakharia, Ajit and Pai, S. Balakrishna and Brahma, Barunashish and MacDonald, Tobey J. and Bellamkonda, Ravi V.}, + date = {2014-03}, + journaltitle = {Nature Materials}, + shortjournal = {Nature Mater}, + volume = {13}, + number = {3}, + pages = {308--316}, + issn = {1476-1122, 1476-4660}, + doi = {10.1038/nmat3878}, + langid = {english}, + file = {/home/src/Offline/Papers/jain et al_2014_guiding intracortical brain tumour cells to an extracortical cytotoxic hydrogel.pdf} +} + +@article{jainPotentialSilverNanoparticlecoated2005, + title = {Potential of Silver Nanoparticle-Coated Polyurethane Foam as an Antibacterial Water Filter}, + author = {Jain, Prashant and Pradeep, T}, + date = {2005}, + journaltitle = {Biotechnology and bioengineering}, + shortjournal = {Biotechnology and bioengineering}, + volume = {90}, + number = {1}, + pages = {59--63}, + issn = {0006-3592}, + keywords = {\#nosource} +} + +@article{james1975personal, + title = {Personal Galvanic Skin Response Monitoring Instrument}, + author = {James, J Michael}, + date = {1975-03-11}, + publisher = {{Google Patents}} +} + +@article{jenkins2018assistants, + title = {Assistants, Guides, Collaborators, Friends: {{The}} Concealed Figures of Conflict Research}, + author = {Jenkins, Sarah Ann}, + date = {2018}, + journaltitle = {Journal of Contemporary Ethnography}, + shortjournal = {J. Contemp. Ethnogr.}, + volume = {47}, + number = {2}, + pages = {143--170}, + publisher = {{Sage Publications Sage CA: Los Angeles, CA}} +} + +@report{jensenChanceThatTwo2021, + title = {The {{Chance That Two People Chosen}} at {{Random Are}} of {{Different Race}} or {{Ethnicity Groups Has Increased Since}} 2010}, + author = {Jensen, Eric and Jones, Nicholas and Rabe, Megan and Pratt, Beverly and Medina, Lauren and Orozco, Kimberly and Spell, Lindsay}, + date = {2021-08-12}, + institution = {{United States Census Bureau}}, + url = {https://www.census.gov/library/stories/2021/08/2020-united-states-population-more-racially-ethnically-diverse-than-2010.html}, + urldate = {2022-09-11}, + abstract = {2020 Census results released today allow us to measure the nation’s racial and ethnic diversity and how it varies at different geographic levels.}, + file = {/home/cedarprince/Zotero/storage/5L43WEGA/2020-united-states-population-more-racially-ethnically-diverse-than-2010.html} +} + +@article{jiaSampleEntropyReveals2017, + title = {Sample Entropy Reveals an Age-Related Reduction in the Complexity of Dynamic Brain}, + author = {Jia, Yanbing and Gu, Hua-Guang and Luo, Qiang}, + date = {2017-12-01}, + journaltitle = {Scientific Reports}, + shortjournal = {Scientific Reports}, + volume = {7}, + doi = {10.1038/s41598-017-08565-y}, + abstract = {Dynamic reconfiguration of the human brain is characterized by the nature of complexity. The purpose of this study was to measure such complexity and also analyze its association with age. We modeled the dynamic reconfiguration process by dynamic functional connectivity, which was established by resting-state functional magnetic resonance imaging (fMRI) data, and we measured complexity within the dynamic functional connectivity by sample entropy (SampEn). A brainwide map of SampEn in healthy subjects shows larger values in the caudate, the olfactory gyrus, the amygdala, and the hippocampus, and lower values in primary sensorimotor and visual areas. Association analysis in healthy subjects indicated that SampEn of the amygdala-cortical connectivity decreases with advancing age. Such age-related loss of SampEn, however, disappears in patients with schizophrenia. These findings suggest that SampEn of the dynamic functional connectivity is a promising indicator of normal aging.}, + file = {/home/src/Papers/jia et al_2017_sample entropy reveals an age-related reduction in the complexity of dynamic.pdf} +} + +@article{jinHighThroughputScreeningSilver2010, + title = {High-{{Throughput Screening}} of {{Silver Nanoparticle Stability}} and {{Bacterial Inactivation}} in {{Aquatic Media}}: {{Influence}} of {{Specific Ions}}}, + author = {Jin, Xue and Li, Minghua and Wang, Jinwen and Marambio-Jones, Catalina and Peng, Fubing and Huang, Xiaofei and Damoiseaux, Robert and Hoek, Eric M. V.}, + date = {2010-10-01}, + journaltitle = {Environmental Science \& Technology}, + shortjournal = {Environ. Sci. Technol.}, + volume = {44}, + number = {19}, + pages = {7321--7328}, + issn = {0013-936X}, + doi = {10.1021/es100854g}, + keywords = {\#nosource} +} + +@article{jiPreparationChitinNanofibril2012, + title = {Preparation of Chitin Nanofibril/Polycaprolactone Nanocomposite from a Nonaqueous Medium Suspension}, + author = {Ji, Ya-li and Wolfe, Patricia S. and Rodriguez, Isaac A. and Bowlin, Gary L.}, + year = {2012/2/14/14 February 2012///}, + journaltitle = {Carbohydrate Polymers}, + shortjournal = {Carbohydrate Polymers}, + volume = {87}, + pages = {2313--2319}, + issn = {0144-8617}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0144861711009830&site=eds-live&scope=site}, + abstract = {Chitin nanofibrils are prepared by treatment of commercial chitin in hydrochloric acid. It is found for the first time that the obtained chitin nanofibrils can be well dispersed in an organic solvent of 2,2,2-trifluoroethanol (TFE) due to its strong ability to form hydrogen bonds. Polycaprolactone (PCL), a water insoluble biodegradable polymer, is selected to blend with chitin nanofibrils to achieve chitin nanofibril/polycaprolactone (n-chitin/PCL) nanocomposites using TFE as a co-solvent. The results show the n-chitin/PCL nanocomposites, either in the form of solvent-cast films or electrospun fiber mats, both exhibit reinforced mechanical properties. Thus, the processing technique from a TFE suspension instead of aqueous suspensions is a good alternative to broaden the family of chitin nanofibril-based nanocomposites.}, + keywords = {\#nosource} +} + +@online{jonathangerberWhatDifferenceDenied, + title = {What {{Is The Difference Between Denied Claims And Rejected Claims}}?}, + shorttitle = {What {{Is The Difference Between Denied Claims And Rejected Claims}}?}, + author = {{Jonathan Gerber}}, + url = {https://www.medcorinc.com/what-is-the-difference-between-denied-claims-and-rejected-claims/}, + urldate = {2022-04-11}, + langid = {american}, + file = {/home/cedarprince/Zotero/storage/LGV6GCZM/what-is-the-difference-between-denied-claims-and-rejected-claims.html} +} + +@patent{jones2001wearable, + type = {patentus}, + title = {Wearable Location Monitoring and Communications System}, + author = {Jones, Thomas}, + date = {2001-12-20}, + number = {Patent App. 09/842,360}, + publisher = {{Google Patents}} +} + +@book{jonesHowLieGraphs2006, + title = {How to {{Lie About Graphs}}}, + author = {Jones, George E.}, + date = {2006-10-24}, + publisher = {{BookSurge Publishing}} +} + +@online{jordanArtificialIntelligenceRevolution18, + type = {Blogging Site}, + title = {Artificial {{Intelligence}}{$\mkern1mu$}—{$\mkern1mu$}{{The Revolution Hasn}}’t {{Happened Yet}}}, + author = {Jordan, Michael}, + date = {0018-04-19}, + organization = {{Medium}}, + keywords = {artificial-intelligence,Engineering,ethics}, + file = {/home/jacob/Papers/Artificial Intelligence — The Revolution Hasn’t Happened Yet.html} +} + +@article{jormInformantQuestionnaireCognitive1989, + title = {The {{Informant Questionnaire}} on {{Cognitive Decline}} in the {{Elderly}} ({{IQCODE}}): Socio-Demographic Correlates, Reliability, Validity and Some Norms}, + shorttitle = {The {{Informant Questionnaire}} on {{Cognitive Decline}} in the {{Elderly}} ({{IQCODE}})}, + author = {Jorm, A. F. and Jacomb, P. A.}, + date = {1989-11}, + journaltitle = {Psychological Medicine}, + shortjournal = {Psychol. Med.}, + volume = {19}, + number = {4}, + pages = {1015--1022}, + issn = {0033-2917, 1469-8978}, + doi = {10.1017/S0033291700005742}, + abstract = {SYNOPSIS The IQCODE is a questionnaire which asks an informant about changes in an elderly person's everyday cognitive function. The questionnaire aims to assess cognitive decline independent of pre-morbid ability. In the present study, the IQCODE was administered to a sample of 613 informants from the general population. In addition, the questionnaire was administered to informants of 309 dementing subjects who had filled it out one year previously. A principal components analysis, using the general population sample, confirmed that the IQCODE measures a general factor of cognitive decline. The questionnaire was found to have high internal reliability in the general population sample (alpha = 0·95) and reasonably high test-retest reliability over one year in the dementing sample ( r = 0·75). The total IQCODE score, as well as each of the 26-items, was found to discriminate well between the general population and dementing samples. The correlation with education was quite small ( r = – 0·13), indicating that contamination by premorbid ability is not a problem.}, + langid = {english}, + file = {/home/src/Offline/Papers/jorm_jacomb_1989_the informant questionnaire on cognitive decline in the elderly (iqcode).pdf} +} + +@article{juddSettingStandardsEvaluation2001, + title = {Setting {{Standards}} in the {{Evaluation}} of {{Community-Based Health Promotion Programmes}} - a {{Unifying Approach}}}, + author = {Judd, Jenni and Frankish, James and Moulton, Glen}, + date = {2001}, + journaltitle = {Health Promotion International}, + shortjournal = {Health Promot. Int.}, + volume = {16}, + number = {4}, + file = {/home/src/Offline/Papers/judd et al_2001_setting standards in the evaluation of community-based health promotion.pdf} +} + +@online{JuliaHealth, + title = {{{JuliaHealth}}}, + url = {https://juliahealth.org/}, + urldate = {2021-08-13} +} + +@book{kafkaMetamorphosis, + title = {The {{Metamorphosis}}}, + author = {Kafka, Franz}, + langid = {english}, + file = {/home/src/Offline/Papers/kafka_the metamorphosis.pdf} +} + +@article{kahana2005spacing, + title = {Spacing and Lag Effects in Free Recall of Pure Lists}, + author = {Kahana, Michael J and Howard, Marc W}, + date = {2005}, + journaltitle = {Psychonomic Bulletin \& Review}, + shortjournal = {Psychon. Bull. Rev.}, + volume = {12}, + number = {1}, + pages = {159--164}, + publisher = {{Springer}} +} + +@online{kailaHowEasilyObject2018, + title = {How to Easily Do {{Object Detection}} on {{Drone Imagery}} Using {{Deep}} Learning}, + author = {Kaila, Gaurav}, + date = {2018-07-02T07:12:57}, + url = {https://medium.com/nanonets/how-we-flew-a-drone-to-monitor-construction-projects-in-africa-using-deep-learning-b792f5c9c471}, + urldate = {2019-07-29}, + abstract = {This article is a comprehensive overview of using deep learning based object detection methods for aerial imagery via drones. We also…}, + langid = {english}, + organization = {{Medium}}, + file = {/home/cedarprince/Zotero/storage/Q9JU7UTG/how-we-flew-a-drone-to-monitor-construction-projects-in-africa-using-deep-learning-b792f5c9c471.html} +} + +@article{kalbe2004demtect, + title = {{{DemTect}}: A New, Sensitive Cognitive Screening Test to Support the Diagnosis of Mild Cognitive Impairment and Early Dementia}, + author = {Kalbe, Elke and Kessler, Josef and Calabrese, Pasquale and Smith, R and Passmore, AP and al Brand, Met and Bullock, R}, + date = {2004}, + journaltitle = {International journal of geriatric psychiatry}, + shortjournal = {Int. J. Geriatr. Psychiatry}, + volume = {19}, + number = {2}, + pages = {136--143}, + publisher = {{Wiley Online Library}}, + keywords = {\#nosource} +} + +@article{kambojOptimizationMicrowaveAssisted2015, + title = {Optimization of Microwave Assisted {{Maillard}} Reaction to Fabricate and Evaluate Corn Fiber Gum-Chitosan {{IPN}} Films}, + author = {Kamboj, Sunil and Singh, Kuldeep and Tiwary, A.K. and Rana, Vikas}, + year = {2015/2/1/February 2015///}, + journaltitle = {Food Hydrocolloids}, + shortjournal = {Food Hydrocolloids}, + volume = {44}, + pages = {260--276}, + issn = {0268-005X}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0268005X14002975&site=eds-live&scope=site}, + abstract = {The aim of this study was to optimize and characterize microwave assisted Maillard reaction between corn fiber gum (CFG) and chitosan (CH) using 33 full factorial design. Browning intensity, surface free energy components, mechanical properties, thermal attributes, electrical performance, water vapor permeability (WVP), solvent interaction behavior and antimicrobial activity were evaluated. The Maillard reaction product of CFG:CH showed shear thinning behavior. The enhancement in the dispersive components of surface free energy indicated Maillard reaction created water resistance in the films. The films were mechanically strong and flexible. The physicochemical descriptors reflected Maillard reaction produces strong interpenetrating polymer network (IPN) that leads to production of films resistant to water, acids and alkali. This was also observed in SEM analysis. In addition, the enhancement in zones of inhibition suggested antibacterial activity of Maillard reaction product. Overall, the films (F21) produced via Maillard reaction “in situ” were tough, flexible, water resistant and antimicrobial in nature. Thus, suggested high potential of these IPN films in food and pharmaceuticals.}, + keywords = {\#nosource} +} + +@article{kamivsalic2018sensors, + title = {Sensors and Functionalities of Non-Invasive Wrist-Wearable Devices: {{A}} Review}, + author = {Kamišalić, Aida and Fister, Iztok and Turkanović, Muhamed and Karakatič, Sašo}, + date = {2018}, + journaltitle = {Sensors}, + volume = {18}, + number = {6}, + pages = {1714}, + publisher = {{Multidisciplinary Digital Publishing Institute}} +} + +@article{kangAutomatedTrackingQuantification, + title = {Automated {{Tracking}} and {{Quantification}} of {{Autistic Behavioral Symptoms Using Microsoft Kinect}}}, + author = {Kang, Joon Young and Kim, Ryunhyung and Kim, Hyunsun and Kang, Yeonjune and Fu, Zhengrui and Khalid, Mamoon I and Schenck, Enja and Thesen, Thomas}, + pages = {5}, + abstract = {The prevalence of autism spectrum disorder (ASD) has risen significantly in the last ten years, and today, roughly 1 in 68 children has been diagnosed. One hallmark set of symptoms in this disorder are stereotypical motor movements. These repetitive movements may include spinning, body-rocking, or hand-flapping, amongst others. Despite the growing number of individuals affected by autism, an effective, accurate method of automatically quantifying such movements remains unavailable. This has negative implications for assessing the outcome of ASD intervention and drug studies. Here we present a novel approach to detecting autistic symptoms using the Microsoft Kinect v.2 to objectively and automatically quantify autistic body movements. The Kinect camera was used to film 12 actors performing three separate stereotypical motor movements each. Visual Gesture Builder (VGB) was implemented to analyze the skeletal structures in these recordings using a machine learning approach. In addition, movement detection was hard-coded in Matlab. Manual grading was used to confirm the validity and reliability of VGB and Matlab analysis. We found that both methods were able to detect autistic body movements with high probability. The machine learning approach yielded highest detection rates, supporting its use in automatically quantifying complex autistic behaviors with multi-dimensional input.}, + langid = {english}, + file = {/home/src/Offline/Papers/kang et al_automated tracking and quantification of autistic behavioral symptoms using.pdf} +} + +@article{kaplan1983boston, + title = {Boston Naming Test. Philadelphia, Lee and Febiger}, + author = {Kaplan, E and Goodglass, H and Weintraub, S}, + date = {1983}, + publisher = {{Inc}}, + keywords = {\#nosource} +} + +@article{katzAgespecificSexspecificPrevalence2012, + title = {Age-Specific and {{Sex-specific Prevalence}} and {{Incidence}} of {{Mild Cognitive Impairment}}, {{Dementia}}, and {{Alzheimer Dementia}} in {{Blacks}} and {{Whites}}: {{A Report From}} the {{Einstein Aging Study}}}, + shorttitle = {Age-Specific and {{Sex-specific Prevalence}} and {{Incidence}} of {{Mild Cognitive Impairment}}, {{Dementia}}, and {{Alzheimer Dementia}} in {{Blacks}} and {{Whites}}}, + author = {Katz, Mindy J. and Lipton, Richard B. and Hall, Charles B. and Zimmerman, Molly E. and Sanders, Amy E. and Verghese, Joe and Dickson, Dennis W. and Derby, Carol A.}, + date = {2012}, + journaltitle = {Alzheimer Disease \& Associated Disorders}, + shortjournal = {Alzheimer Disease \& Associated Disorders}, + volume = {26}, + number = {4}, + pages = {335--343}, + issn = {0893-0341}, + doi = {10.1097/WAD.0b013e31823dbcfc}, + langid = {english}, + file = {/home/src/Offline/Papers/katz et al_2012_age-specific and sex-specific prevalence and incidence of mild cognitive.pdf} +} + +@unpublished{kayiPredictiveLinguisticFeatures2018, + title = {Predictive {{Linguistic Features}} of {{Schizophrenia}}}, + author = {Kayi, Efsun Sarioglu and Diab, Mona and Pauselli, Luca and Compton, Michael and Coppersmith, Glen}, + date = {2018-10-22}, + shortjournal = {ArXiv181009377 Cs}, + eprint = {1810.09377}, + eprinttype = {arxiv}, + primaryclass = {cs}, + url = {http://arxiv.org/abs/1810.09377}, + urldate = {2019-04-28}, + abstract = {Schizophrenia is one of the most disabling and difficult to treat of all human medical/health conditions, ranking in the top ten causes of disability worldwide. It has been a puzzle in part due to difficulty in identifying its basic, fundamental components. Several studies have shown that some manifestations of schizophrenia (e.g., the negative symptoms that include blunting of speech prosody, as well as the disorganization symptoms that lead to disordered language) can be understood from the perspective of linguistics. However, schizophrenia research has not kept pace with technologies in computational linguistics, especially in semantics and pragmatics. As such, we examine the writings of schizophrenia patients analyzing their syntax, semantics and pragmatics. In addition, we analyze tweets of (self proclaimed) schizophrenia patients who publicly discuss their diagnoses. For writing samples dataset, syntactic features are found to be the most successful in classification whereas for the less structured Twitter dataset, a combination of features performed the best.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {Computer Science - Computation and Language}, + file = {/home/src/Offline/Papers/kayi et al_2018_predictive linguistic features of schizophrenia.pdf} +} + +@article{keehner2011different, + title = {Different Clues from Different Views: {{The}} Role of Image Format in Public Perceptions of Neuroimaging Results}, + author = {Keehner, Madeleine and Mayberry, Lisa and Fischer, Martin H}, + date = {2011}, + journaltitle = {Psychonomic Bulletin \& Review}, + shortjournal = {Psychon. Bull. Rev.}, + volume = {18}, + number = {2}, + pages = {422--428}, + publisher = {{Springer}} +} + +@article{keeling2020efficacy, + title = {The Efficacy of Contact Tracing for the Containment of the 2019 Novel Coronavirus ({{COVID-19}}).}, + author = {Keeling, Matt J and Hollingsworth, T Deirdre and Read, Jonathan M}, + date = {2020}, + journaltitle = {medRxiv}, + publisher = {{Cold Spring Harbor Laboratory Press}} +} + +@article{kent2011hypoxemia, + title = {Hypoxemia in Patients with {{COPD}}: Cause, Effects, and Disease Progression}, + author = {Kent, Brian D and Mitchell, Patrick D and McNicholas, Walter T}, + date = {2011}, + journaltitle = {International journal of chronic obstructive pulmonary disease}, + shortjournal = {Int. J. Chron. Obstruct. Pulmon. Dis.}, + volume = {6}, + pages = {199}, + publisher = {{Dove Press}} +} + +@article{kerr1978specific, + title = {Specific and Varied Practice of Motor Skill}, + author = {Kerr, Robert and Booth, Bernard}, + date = {1978}, + journaltitle = {Perceptual and motor skills}, + shortjournal = {Percept. Mot. Skills}, + volume = {46}, + number = {2}, + pages = {395--401}, + publisher = {{SAGE Publications Sage CA: Los Angeles, CA}} +} + +@misc{keyaEquitableAllocationHealthcare2020, + title = {Equitable {{Allocation}} of {{Healthcare Resources}} with {{Fair Cox Models}}}, + author = {Keya, Kamrun Naher and Islam, Rashidul and Pan, Shimei and Stockwell, Ian and Foulds, James R.}, + date = {2020-10-14}, + number = {arXiv:2010.06820}, + eprint = {2010.06820}, + eprinttype = {arxiv}, + primaryclass = {cs}, + publisher = {{arXiv}}, + doi = {10.48550/arXiv.2010.06820}, + abstract = {Healthcare programs such as Medicaid provide crucial services to vulnerable populations, but due to limited resources, many of the individuals who need these services the most languish on waiting lists. Survival models, e.g. the Cox proportional hazards model, can potentially improve this situation by predicting individuals' levels of need, which can then be used to prioritize the waiting lists. Providing care to those in need can prevent institutionalization for those individuals, which both improves quality of life and reduces overall costs. While the benefits of such an approach are clear, care must be taken to ensure that the prioritization process is fair or independent of demographic information-based harmful stereotypes. In this work, we develop multiple fairness definitions for survival models and corresponding fair Cox proportional hazards models to ensure equitable allocation of healthcare resources. We demonstrate the utility of our methods in terms of fairness and predictive accuracy on two publicly available survival datasets.}, + archiveprefix = {arXiv}, + keywords = {Computer Science - Artificial Intelligence,Computer Science - Computers and Society,Computer Science - Machine Learning}, + file = {/home/cedarprince/Zotero/storage/PZ4GEX3J/Keya et al_2020_Equitable Allocation of Healthcare Resources with Fair Cox Models.pdf;/home/cedarprince/Zotero/storage/LFJUXACE/2010.html} +} + +@incollection{kiddAwareHomeLiving1999, + title = {The {{Aware Home}}: {{A Living Laboratory}} for {{Ubiquitous Computing Research}}}, + shorttitle = {The {{Aware Home}}}, + booktitle = {Cooperative {{Buildings}}. {{Integrating Information}}, {{Organizations}}, and {{Architecture}}}, + author = {Kidd, Cory D. and Orr, Robert and Abowd, Gregory D. and Atkeson, Christopher G. and Essa, Irfan A. and MacIntyre, Blair and Mynatt, Elizabeth and Starner, Thad E. and Newstetter, Wendy}, + editor = {Streitz, Norbert A. and Siegel, Jane and Hartkopf, Volker and Konomi, Shin’ichi}, + options = {useprefix=true}, + date = {1999}, + volume = {1670}, + pages = {191--198}, + publisher = {{Springer Berlin Heidelberg}}, + location = {{Berlin, Heidelberg}}, + doi = {10.1007/10705432_17}, + abstract = {We are building a home, called the Aware Home, to create a living laboratory for research in ubiquitous computing for everyday activities. This paper introduces the Aware Home project and outlines some of our technologyand human-centered research objectives in creating the Aware Home.}, + editorb = {Goos, Gerhard and Hartmanis, Juris and van Leeuwen, Jan}, + editorbtype = {redactor}, + isbn = {978-3-540-66596-0 978-3-540-48106-5}, + langid = {english}, + file = {/home/src/Offline/Papers/kidd et al_1999_the aware home.pdf} +} + +@inproceedings{kientzGeorgiaTechAware2008, + title = {The {{Georgia Tech}} Aware Home}, + booktitle = {Proceeding of the Twenty-Sixth Annual {{CHI}} Conference Extended Abstracts on {{Human}} Factors in Computing Systems - {{CHI}} '08}, + author = {Kientz, Julie A. and Patel, Shwetak N. and Jones, Brian and Price, Ed and Mynatt, Elizabeth D. and Abowd, Gregory D.}, + date = {2008}, + pages = {3675}, + publisher = {{ACM Press}}, + location = {{Florence, Italy}}, + doi = {10.1145/1358628.1358911}, + abstract = {The Aware Home Research Initiative (AHRI) at Georgia Tech is devoted to the multidisciplinary exploration of emerging technologies and services based in the home. Starting in 1998, our collection of faculty and students has created a unique research facility that allows us to simulate and evaluate user experiences with off-theshelf and state-of-the-art technologies. With specific expertise in health, education, entertainment and usable security, we are able to apply our research to problems of significant social and economic impact.}, + eventtitle = {Proceeding of the Twenty-Sixth Annual {{CHI}} Conference Extended Abstracts}, + langid = {english}, + file = {/home/src/Offline/Papers/kientz et al_2008_the georgia tech aware home.pdf} +} + +@book{kierkegaard2013kierkegaard, + title = {Kierkegaard's Writings, {{VI}}, Volume 6: Fear and Trembling/Repetition}, + author = {Kierkegaard, Søren}, + date = {2013}, + publisher = {{Princeton University Press}} +} + +@incollection{kindlerInteractionSARSMERS2016, + title = {Interaction of {{SARS}} and {{MERS Coronaviruses}} with the {{Antiviral Interferon Response}}}, + booktitle = {Advances in {{Virus Research}}}, + author = {Kindler, E. and Thiel, V. and Weber, F.}, + date = {2016}, + volume = {96}, + pages = {219--243}, + publisher = {{Elsevier}}, + doi = {10.1016/bs.aivir.2016.08.006}, + abstract = {Severe Acute Respiratory Syndrome (SARS) and Middle East Respiratory Syndrome (MERS) are the most severe coronavirus (CoV)-associated diseases in humans. The causative agents, SARS-CoV and MERS-CoV, are of zoonotic origin but may be transmitted to humans, causing severe and often fatal respiratory disease in their new host. The two coronaviruses are thought to encode an unusually large number of factors that allow them to thrive and replicate in the presence of efficient host defense mechanisms, especially the antiviral interferon system. Here, we review the recent progress in our understanding of the strategies that highly pathogenic coronaviruses employ to escape, dampen, or block the antiviral interferon response in human cells.}, + isbn = {978-0-12-804736-1}, + langid = {english}, + file = {/home/src/Offline/Papers/kindler et al_2016_interaction of sars and mers coronaviruses with the antiviral interferon.pdf} +} + +@article{kingCommunityEngagementHuman2014, + title = {Community Engagement and the Human Infrastructure of Global Health Research}, + author = {King, Katherine and Kolopack, Pamela and Merritt, Maria and James, Lavery}, + date = {2014}, + journaltitle = {BMC Medical Ethics}, + shortjournal = {BMC Med. Ethics}, + volume = {15}, + number = {84}, + file = {/home/jacob/Dropbox/Papers/King et al. - 2014 - Community engagement and the human infrastructure .pdf} +} + +@unpublished{kirchoffGreenChemistryGreener2002, + title = {Green {{Chemistry}}: {{A Greener Clean}}}, + author = {Kirchoff, Mary}, + date = {2002-10-26}, + url = {https://view.officeapps.live.com/op/view.aspx?src=http%3A%2F%2Fwww.acs.org%2Fcontent%2Fdam%2Facsorg%2Fgreenchemistry%2Feducation%2Fresources%2Fgreen-chemistry-a-greener-clean.ppt}, + urldate = {2015-12-06}, + eventtitle = {Chicago {{ACS Chemistry Day}}}, + file = {/home/cedarprince/Zotero/storage/362H7VPA/view.html} +} + +@article{kissingerHowEnlightenmentEnds2018, + title = {How the {{Enlightenment Ends}}}, + author = {Kissinger, Henry A.}, + year = {June 2018 Issue}, + journaltitle = {The Atlantic}, + issn = {1072-7825}, + url = {https://www.theatlantic.com/magazine/archive/2018/06/henry-kissinger-ai-could-mean-the-end-of-human-history/559124/?utm_source=newsletter&utm_medium=email&utm_campaign=atlantic-daily-newsletter&utm_content=20180515&silverid-ref=NDQwOTQyNzEyMzYwS0}, + urldate = {2018-05-22}, + abstract = {Philosophically, intellectually—in every way—human society is unprepared for the rise of artificial intelligence.}, + entrysubtype = {magazine}, + keywords = {\#nosource,artificial-intelligence,ethics} +} + +@article{klecknerSimpleTransparentFlexible2018, + title = {Simple, {{Transparent}}, and {{Flexible Automated Quality Assessment Procedures}} for {{Ambulatory Electrodermal Activity Data}}}, + author = {Kleckner, Ian R. and Jones, Rebecca M. and Wilder-Smith, Oliver and Wormwood, Jolie B. and Akcakaya, Murat and Quigley, Karen S. and Lord, Catherine and Goodwin, Matthew S.}, + date = {2018-07}, + journaltitle = {IEEE Transactions on Biomedical Engineering}, + shortjournal = {IEEE Trans. Biomed. Eng.}, + volume = {65}, + number = {7}, + pages = {1460--1467}, + issn = {0018-9294, 1558-2531}, + doi = {10.1109/TBME.2017.2758643}, + abstract = {Objective—Electrodermal activity (EDA) is a non-invasive measure of sympathetic activation often used to study emotions, decision-making, and health. The use of “ambulatory” EDA in everyday life presents novel challenges—frequent artifacts and long recordings—with inconsistent methods available for efficiently and accurately assessing data quality. We developed and validated a simple, transparent, flexible, and automated quality assessment procedure for ambulatory EDA data.}, + langid = {english}, + file = {/home/src/Offline/Papers/kleckner et al_2018_simple, transparent, and flexible automated quality assessment procedures for.pdf} +} + +@article{kleinmanFourSocialTheories2010, + title = {Four Social Theories for Global Health}, + author = {Kleinman, Arthur}, + date = {2010-05}, + journaltitle = {The Lancet}, + shortjournal = {The Lancet}, + volume = {375}, + number = {9725}, + pages = {1518--1519}, + issn = {01406736}, + doi = {10.1016/S0140-6736(10)60646-0}, + langid = {english}, + file = {/home/src/Offline/Papers/kleinman_2010_four social theories for global health.pdf} +} + +@article{klenk2020ethics, + title = {Ethics of Digital Contact Tracing and {{COVID-19}}: {{Who}} Is (Not) Free to Go?}, + author = {Klenk, Michael and Duijf, Hein and Engels, Christian}, + date = {2020}, + journaltitle = {Available at SSRN 3595394}, + shortjournal = {Available SSRN 3595394} +} + +@article{klonsky2003deliberate, + title = {Deliberate Self-Harm in a Nonclinical Population: {{Prevalence}} and Psychological Correlates}, + author = {Klonsky, E David and Oltmanns, Thomas F and Turkheimer, Eric}, + date = {2003}, + journaltitle = {American journal of Psychiatry}, + shortjournal = {Am. J. Psychiatry}, + volume = {160}, + number = {8}, + pages = {1501--1508}, + publisher = {{Am Psychiatric Assoc}} +} + +@article{klonsky2007functions, + title = {The Functions of Deliberate Self-Injury: {{A}} Review of the Evidence}, + author = {Klonsky, E David}, + date = {2007}, + journaltitle = {Clinical psychology review}, + shortjournal = {Clin. Psychol. Rev.}, + volume = {27}, + number = {2}, + pages = {226--239}, + publisher = {{Elsevier}} +} + +@article{klonsky2007functions, + title = {The Functions of Deliberate Self-Injury: {{A}} Review of the Evidence}, + author = {Klonsky, E David}, + date = {2007}, + journaltitle = {Clinical psychology review}, + shortjournal = {Clin. Psychol. Rev.}, + volume = {27}, + number = {2}, + pages = {226--239}, + publisher = {{Elsevier}} +} + +@article{klove1963grooved, + title = {Grooved Pegboard Test}, + author = {Klove, H}, + date = {1963}, + journaltitle = {Lafayette, IN: Lafayette Instrument}, + shortjournal = {Lafayette Lafayette Instrum.}, + keywords = {\#nosource} +} + +@article{klue2000, + author = {Klue, U.}, + date = {2000}, + journaltitle = {Journal of Biomedical Materials Research}, + shortjournal = {J. Biomed. Mater. Res.}, + volume = {53}, + number = {6}, + pages = {621--623}, + keywords = {\#nosource}, + annotation = {Authors: Klue, U., et. al.} +} + +@article{kluehEfficacySilvercoatedFabric2000, + title = {Efficacy of Silver-Coated Fabric to Prevent Bacterial Colonization and Subsequent Device-Based Biofilm Formation}, + author = {Klueh, U. and Wagner, V. and Kelly, S. and Johnson, A. and Bryers, J. D.}, + date = {2000-01-01}, + journaltitle = {Journal of Biomedical Materials Research}, + shortjournal = {J. Biomed. Mater. Res.}, + volume = {53}, + number = {6}, + pages = {621--631}, + issn = {1097-4636}, + doi = {10.1002/1097-4636(2000)53:6<621::AID-JBM2>3.0.CO;2-Q}, + keywords = {\#nosource,bacterial adhesion,bactericidal fabric,silver-coated fabric} +} + +@article{knightDarkSecretHeart17, + title = {The {{Dark Secret}} at the {{Heart}} of {{AI}}}, + author = {Knight, Will}, + date = {0017-04-11}, + journaltitle = {MIT Technology Review}, + url = {https://www.technologyreview.com/s/604087/the-dark-secret-at-the-heart-of-ai/}, + urldate = {2018-02-04}, + entrysubtype = {newspaper}, + keywords = {\#nosource} +} + +@article{knightPutHumansCenter17, + title = {Put {{Humans}} at the {{Center}} of {{AI}}}, + author = {Knight, Will}, + date = {0017-10-09}, + journaltitle = {MIT Technology Review}, + url = {https://www.technologyreview.com/s/609060/put-humans-at-the-center-of-ai/}, + urldate = {2018-02-04}, + entrysubtype = {newspaper}, + keywords = {\#nosource} +} + +@inproceedings{kocielnik2013smart, + title = {Smart Technologies for Long-Term Stress Monitoring at Work}, + booktitle = {Proceedings of the 26th {{IEEE}} International Symposium on Computer-Based Medical Systems}, + author = {Kocielnik, Rafal and Sidorova, Natalia and Maggi, Fabrizio Maria and Ouwerkerk, Martin and Westerink, Joyce HDM}, + date = {2013}, + pages = {53--58}, + organization = {{IEEE}} +} + +@article{kohekMANDATORYMASKBYLAWS, + title = {{{MANDATORY MASK BYLAWS}}: {{CONSIDERATIONS BEYOND EXEMPTION FOR PERSONS WITH DISABILITIES}}}, + author = {Kohek, Jessica and Seth, Ash and Edwards, Meaghan and Zwicker, Jennifer}, + pages = {12}, + abstract = {The city of Calgary, like many other cities, has made wearing a mask mandatory in most public spaces in order to slow the spread of COVID-19, but adhering to the rule will not always be possible for people with disabilities. The city is clearly aware of the mask-wearing challenges faced by some people with disabilities and their caregivers, and has created exemptions to the rule for them. However, that awareness needs to be publicly promoted, otherwise people with disabilities could face social stigma, criticism or be refused service when they try to reenter the economy without a mask. This could add to the already greater risks and burdens that people with disabilities have faced throughout the pandemic.}, + langid = {english}, + file = {/home/src/Papers/kohek et al_mandatory mask bylaws.pdf} +} + +@online{kontakt.ioSmartBeaconSB162N.D., + title = {Smart {{Beacon SB16-2}}}, + author = {{Kontakt.io}}, + year = {N.D.}, + url = {https://store.kontakt.io/our-products/30-smart-beacon-sb16-2.html}, + urldate = {2020-01-14}, + file = {/home/cedarprince/Zotero/storage/5TDL7B53/30-smart-beacon-sb16-2.html} +} + +@incollection{korsmanHumanCoronaviruses2012, + title = {Human Coronaviruses}, + booktitle = {Virology}, + author = {Korsman, Stephen N.J. and van Zyl, Gert U. and Nutt, Louise and Andersson, Monique I. and Preiser, Wolfgang}, + options = {useprefix=true}, + date = {2012}, + pages = {94--95}, + publisher = {{Elsevier}}, + doi = {10.1016/B978-0-443-07367-0.00040-9}, + isbn = {978-0-443-07367-0}, + langid = {english}, + file = {/home/src/Papers/korsman et al_2012_human coronaviruses.pdf} +} + +@article{kowalkImprovedPrivacyawareSystem, + title = {An Improved Privacy-Aware System for Objective and Subjective Ecological Momentary Assessment}, + author = {Kowalk, Ulrik and Kissner, Sven and Gablenz, Petra Von and Holube, Inga and Bitzer, Joerg}, + pages = {8}, + langid = {english}, + file = {/home/src/Offline/Papers/kowalk et al_an improved privacy-aware system for objective and subjective ecological.pdf} +} + +@article{krahn2014health, + title = {Health Disparities of Adults with Intellectual Disabilities: What Do We Know? {{What}} Do We Do?}, + author = {Krahn, Gloria L and Fox, Michael H}, + date = {2014}, + journaltitle = {Journal of Applied Research in Intellectual Disabilities}, + shortjournal = {J. Appl. Res. Intellect. Disabil.}, + volume = {27}, + number = {5}, + pages = {431--446}, + publisher = {{Wiley Online Library}} +} + +@article{krahn2015persons, + title = {Persons with Disabilities as an Unrecognized Health Disparity Population}, + author = {Krahn, Gloria L and Walker, Deborah Klein and Correa-De-Araujo, Rosaly}, + date = {2015}, + journaltitle = {American journal of public health}, + shortjournal = {Am. J. Public Health}, + volume = {105}, + number = {S2}, + pages = {S198--S206}, + publisher = {{American Public Health Association}} +} + +@article{krakowiakSleepProblemsChildren2008, + title = {Sleep Problems in Children with Autism Spectrum Disorders, Developmental Delays, and Typical Development: A Population-Based Study}, + shorttitle = {Sleep Problems in Children with Autism Spectrum Disorders, Developmental Delays, and Typical Development}, + author = {Krakowiak, Paula and Goodlin-Jones, Beth and Hertz-Picciotto, Irva and Croen, Lisa A. and Hansen, Robin L.}, + date = {2008-06}, + journaltitle = {Journal of Sleep Research}, + shortjournal = {J Sleep Res}, + volume = {17}, + number = {2}, + pages = {197--206}, + issn = {0962-1105, 1365-2869}, + doi = {10.1111/j.1365-2869.2008.00650.x}, + langid = {english}, + keywords = {autism,sleep}, + file = {/home/cedarprince/Zotero/storage/8T63TVVS/krakowiak et al_2008_sleep problems in children with autism spectrum disorders, developmental.pdf;/home/src/Offline/Papers/krakowiak et al_2008_sleep problems in children with autism spectrum disorders, developmental.pdf} +} + +@book{kriegerEpidemiologyPeopleHealth2011, + title = {Epidemiology and the People's Health: Theory and Context}, + shorttitle = {Epidemiology and the People's Health}, + author = {Krieger, Nancy}, + date = {2011}, + publisher = {{Oxford University Press}}, + location = {{New York}}, + abstract = {"Epidemiology is often referred to as the science of public health. However, unlike other major sciences, its theoretical foundations are rarely articulated. While the idea of epidemiologic theory may seem dry and arcane, it is at its core about explaining the people's health. It is about life and death. It is about biology and society. It is about ecology and the economy. It is about how myriad aspects of people's lives--involving work, dignity, desire, love, play, conflict, discrimination, and injustice--become literally incorporated biologically into our bodies and manifest in our health status, individually and collectively. And it is about essential knowledge critical for improving the people's health and minimizing inequitable burdens of disease, disability, and death. Woven from a vast array of schools of thought, including those in the natural, social, and biomedical sciences, epidemiologic theory is a rich tapestry whose time for analysis is long overdue. By tracing its history and contours from ancient societies on through the development of--and debates within--contemporary epidemiology worldwide, Nancy Krieger shows how epidemiologic theory has long shaped epidemiologic practice, knowledge, and the politics of public health. Outlining an ecosocial theory of disease distribution that situates both population health and epidemiologic theory in societal and ecologic context, she offers a more holistic picture of how we embody the human experience"--Provided by publisher}, + isbn = {978-0-19-538387-4}, + langid = {english}, + pagetotal = {381}, + keywords = {_tablet,Epidemiologic Methods,Epidemiology,Methodology}, + annotation = {OCLC: ocn685111261}, + file = {/home/src/Papers/krieger_2011_epidemiology and the people's health.pdf} +} + +@article{kriegerMethodsScientificStudy2012, + title = {Methods for the {{Scientific Study}} of {{Discrimination}} and {{Health}}: {{An Ecosocial Approach}}}, + shorttitle = {Methods for the {{Scientific Study}} of {{Discrimination}} and {{Health}}}, + author = {Krieger, Nancy}, + date = {2012-05}, + journaltitle = {American Journal of Public Health}, + shortjournal = {Am J Public Health}, + volume = {102}, + number = {5}, + pages = {936--944}, + issn = {0090-0036, 1541-0048}, + doi = {10.2105/AJPH.2011.300544}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Krieger_2012_Methods for the Scientific Study of Discrimination and Health.pdf} +} + +@online{krogerJavisV0How, + title = {Javis v0.3: {{How}} to Animate a {{Fourier}} Series}, + shorttitle = {Javis v0.3}, + author = {Kröger, Ole}, + url = {https://opensourc.es/blog/javis-v0.3/}, + urldate = {2020-12-07}, + abstract = {The biggest changes in Javis v0.3 and how it makes animations easier. Making Fourier animations in a few minutes.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/TIRMGHY6/javis-v0.3.html} +} + +@article{kucharski2020effectiveness, + title = {Effectiveness of Isolation, Testing, Contact Tracing and Physical Distancing on Reducing Transmission of {{SARS-CoV-2}} in Different Settings}, + author = {Kucharski, Adam J and Klepac, Petra and Conlan, Andrew and Kissler, Stephen M and Tang, Maria and Fry, Hannah and Gog, Julia and Edmunds, John and Group, CMMID COVID-19 Working and others}, + date = {2020}, + journaltitle = {medRxiv}, + publisher = {{Cold Spring Harbor Laboratory Press}} +} + +@article{kucharskiEffectivenessIsolationTesting2020, + title = {Effectiveness of Isolation, Testing, Contact Tracing, and Physical Distancing on Reducing Transmission of {{SARS-CoV-2}} in Different Settings: A Mathematical Modelling Study}, + shorttitle = {Effectiveness of Isolation, Testing, Contact Tracing, and Physical Distancing on Reducing Transmission of {{SARS-CoV-2}} in Different Settings}, + author = {Kucharski, Adam J and Klepac, Petra and Conlan, Andrew J K and Kissler, Stephen M and Tang, Maria L and Fry, Hannah and Gog, Julia R and Edmunds, W John and Emery, Jon C and Medley, Graham and Munday, James D and Russell, Timothy W and Leclerc, Quentin J and Diamond, Charlie and Procter, Simon R and Gimma, Amy and Sun, Fiona Yueqian and Gibbs, Hamish P and Rosello, Alicia and van Zandvoort, Kevin and Hué, Stéphane and Meakin, Sophie R and Deol, Arminder K and Knight, Gwen and Jombart, Thibaut and Foss, Anna M and Bosse, Nikos I and Atkins, Katherine E and Quilty, Billy J and Lowe, Rachel and Prem, Kiesha and Flasche, Stefan and Pearson, Carl A B and Houben, Rein M G J and Nightingale, Emily S and Endo, Akira and Tully, Damien C and Liu, Yang and Villabona-Arenas, Julian and O'Reilly, Kathleen and Funk, Sebastian and Eggo, Rosalind M and Jit, Mark and Rees, Eleanor M and Hellewell, Joel and Clifford, Samuel and Jarvis, Christopher I and Abbott, Sam and Auzenbergs, Megan and Davies, Nicholas G and Simons, David}, + options = {useprefix=true}, + date = {2020-10}, + journaltitle = {The Lancet Infectious Diseases}, + shortjournal = {The Lancet Infectious Diseases}, + volume = {20}, + number = {10}, + pages = {1151--1160}, + issn = {14733099}, + doi = {10.1016/S1473-3099(20)30457-6}, + abstract = {Background The isolation of symptomatic cases and tracing of contacts has been used as an early COVID-19 containment measure in many countries, with additional physical distancing measures also introduced as outbreaks have grown. To maintain control of infection while also reducing disruption to populations, there is a need to understand what combination of measures—including novel digital tracing approaches and less intensive physical distancing—might be required to reduce transmission. We aimed to estimate the reduction in transmission under different control measures across settings and how many contacts would be quarantined per day in different strategies for a given level of symptomatic case incidence.}, + langid = {english}, + file = {/home/src/Papers/kucharski et al_2020_effectiveness of isolation, testing, contact tracing, and physical distancing.pdf} +} + +@article{kuhlmeiActigraphicDaytimeActivity2013, + title = {Actigraphic Daytime Activity Is Reduced in Patients with Cognitive Impairment and Apathy}, + author = {Kuhlmei, A. and Walther, B. and Becker, T. and Müller, U. and Nikolaus, T.}, + date = {2013-02}, + journaltitle = {European Psychiatry}, + shortjournal = {European Psychiatry}, + volume = {28}, + number = {2}, + pages = {94--97}, + issn = {09249338}, + doi = {10.1016/j.eurpsy.2011.04.006}, + abstract = {Objectives: Apathy is a neuropsychiatric symptom in mild cognitive impairment (MCI) and dementia. This study examines correlations between Apathy Evaluation Scale (AES) ratings and actigraphic measures of daytime activity. The aim of this study is to determine the value of ambulatory actigraphy in the assessment of locomotor deficits as a correlate of apathy in geriatric patients with cognitive impairment. Patients and methods: In this cross-sectional study a total of 82 participants were recruited, 32 patients with dementia, 21 patients with MCI and 23 elderly controls. Rating scales for apathy (AES) and depression (Beck Depression Inventory, BDI) were completed. To measure daytime activity a wrist-worn actigraph and an established protocol were used. A single measure of mean daytime activity per participant was calculated for further statistical analysis. Results: In the two groups of patients with MCI and dementia, apathy is associated with reduced daytime activity, independent of diagnosis (no group by apathy interaction). AES scores correlate significantly with daytime activity. Cognitive impairment reduces daytime activity (effect greater in dementia than in MCI). Daytime activity is negatively correlated with memory deficits. Conclusion: Ambulatory actigraphy is a promising method to evaluate self-initiated action as a correlate of apathy in patients with cognitive impairment. ß 2011 Elsevier Masson SAS. All rights reserved.}, + langid = {english}, + file = {/home/src/Offline/Papers/kuhlmei et al_2013_actigraphic daytime activity is reduced in patients with cognitive impairment.pdf} +} + +@book{kuhnStructureScientificRevolutions2012, + title = {The Structure of Scientific Revolutions}, + author = {Kuhn, Thomas S. and Hacking, Ian}, + date = {2012}, + edition = {Fourth edition}, + publisher = {{The University of Chicago Press}}, + location = {{Chicago ; London}}, + isbn = {978-0-226-45811-3 978-0-226-45812-0}, + langid = {english}, + pagetotal = {217}, + keywords = {History,Philosophy,Science}, + file = {/home/src/Papers/kuhn_hacking_2012_the structure of scientific revolutions.pdf} +} + +@article{kwaiWhatHeDid2018, + title = {What {{He Did}} on {{His Summer Break}}: {{Exposed}} a {{Global Security Flaw}}}, + author = {Kwai, Isabella}, + date = {2018-01-30}, + journaltitle = {The New York Times}, + url = {https://www.nytimes.com/2018/01/30/world/australia/strava-heat-map-student.html?smid=tw-nytimes&smtyp=cur}, + urldate = {2018-02-04}, + entrysubtype = {newspaper}, + keywords = {\#nosource} +} + +@online{kyrkouTrainingDeeplearningClassifier2018, + title = {Training a Deep-Learning Classifier for Aerial Top View Detection of Vehicles}, + author = {Kyrkou, Christos}, + date = {2018-03-27T11:41:23}, + url = {https://medium.com/@ckyrkou/training-a-deep-learning-classifier-for-aerial-top-view-detection-of-vehicles-874f88d81c4}, + urldate = {2019-07-29}, + abstract = {Deep learning approaches have demonstrated state-of-the-art performance in various computer vision tasks such as object detection and…}, + langid = {english}, + organization = {{Medium}}, + file = {/home/cedarprince/Zotero/storage/FQQ5QXAH/training-a-deep-learning-classifier-for-aerial-top-view-detection-of-vehicles-874f88d81c4.html} +} + +@article{ladhani2020increased, + title = {Increased Risk of {{SARS-CoV-2}} Infection in Staff Working across Different Care Homes: Enhanced {{CoVID-19}} Outbreak Investigations in {{London}} Care {{Homes}}}, + author = {Ladhani, Shamez N and Chow, J Yimmy and Janarthanan, Roshni and Fok, Jonathan and Crawley-Boevey, Emma and Vusirikala, Amoolya and Fernandez, Elena and Perez, Marina Sanchez and Tang, Suzanne and Dun-Campbell, Kate and others}, + date = {2020}, + journaltitle = {Journal of Infection}, + shortjournal = {J. Infect.}, + volume = {81}, + number = {4}, + pages = {621--624}, + publisher = {{Elsevier}} +} + +@article{lahav2007action, + title = {Action Representation of Sound: Audiomotor Recognition Network While Listening to Newly Acquired Actions}, + author = {Lahav, Amir and Saltzman, Elliot and Schlaug, Gottfried}, + date = {2007}, + journaltitle = {Journal of Neuroscience}, + shortjournal = {J. Neurosci.}, + volume = {27}, + number = {2}, + pages = {308--314}, + publisher = {{Soc Neuroscience}} +} + +@article{lambert1960verbal, + title = {Verbal Satiation and Changes in the Intensity of Meaning.}, + author = {Lambert, Wallace E and Jakobovits, Leon A}, + date = {1960}, + journaltitle = {Journal of Experimental Psychology}, + shortjournal = {J. Exp. Psychol.}, + volume = {60}, + number = {6}, + pages = {376}, + publisher = {{American Psychological Association}} +} + +@article{landes2019heterogeneity, + title = {Heterogeneity in Age at Death for Adults with Developmental Disability}, + author = {Landes, SD and Stevens, JD and Turk, MA}, + date = {2019}, + journaltitle = {Journal of Intellectual Disability Research}, + shortjournal = {J. Intellect. Disabil. Res.}, + volume = {63}, + number = {12}, + pages = {1482--1487}, + publisher = {{Wiley Online Library}} +} + +@article{landes2019obscuring, + title = {Obscuring Effect of Coding Developmental Disability as the Underlying Cause of Death on Mortality Trends for Adults with Developmental Disability: A Cross-Sectional Study Using {{US Mortality Data}} from 2012 to 2016}, + author = {Landes, Scott D and Stevens, James Dalton and Turk, Margaret A}, + date = {2019}, + journaltitle = {BMJ open}, + volume = {9}, + number = {2}, + pages = {e026614}, + publisher = {{British Medical Journal Publishing Group}} +} + +@article{landesCOVID19OutcomesPeople2020, + title = {{{COVID-19}} Outcomes among People with Intellectual and Developmental Disability Living in Residential Group Homes in {{New York State}}}, + author = {Landes, Scott D. and Turk, Margaret A. and Formica, Margaret K. and McDonald, Katherine E. and Stevens, J. Dalton}, + date = {2020-06}, + journaltitle = {Disability and Health Journal}, + shortjournal = {Disability and Health Journal}, + pages = {100969}, + issn = {19366574}, + doi = {10.1016/j.dhjo.2020.100969}, + abstract = {Background: People with intellectual and developmental disabilities (IDD) may be at higher risk of severe outcomes from COVID-19. Objective: To describe COVID-19 outcomes among people with IDD living in residential groups homes in the state of New York and the general population of New York State. Methods: Data for people with IDD are from a coalition of organizations providing over half of the residential services for the state of New York, and from the New York State Department of Health. Analysis describes COVID-19 case rates, case-fatality, and mortality among people with IDD living in residential group homes and New York State through May 28, 2020. Results: People with IDD living in residential group homes were at greater risk of severe COVID-19 outcomes: case rates e 7,841 per 100,000 for people with IDD compared to 1,910 for New York State; case-fatality e 15.0\% for people with IDD compared to 7.9\% for New York State; and mortality rate e 1,175 per 100,000 for people with IDD compared to 151 per 100,000 for New York State. Differences in cases and mortality rate were confirmed across regions of the state, but case-fatality rate was only higher for people with IDD in and around the New York City region. Conclusions: COVID-19 appears to present a greater risk to people with IDD, especially those living in congregate settings. A full understanding of the severity of this risk will not be possible until US states begin publicly sharing all relevant data they have on COVID-19 outcomes among this population.}, + langid = {english}, + file = {/home/src/Papers/landes et al_2020_covid-19 outcomes among people with intellectual and developmental disability.pdf} +} + +@article{landesCOVID19PneumoniaIncreased, + title = {{{COVID-19}} and {{Pneumonia}}: {{Increased Risk}} for {{Individuals}} with {{Intellectual}} and {{Developmental Disabilities}} during the {{Pandemic}}}, + author = {Landes, Scott D and Stevens, Dalton and Turk, Margaret A}, + pages = {5}, + langid = {english}, + file = {/home/src/Papers/landes et al_covid-19 and pneumonia.pdf} +} + +@article{langaDiagnosisManagementMild2014, + title = {The {{Diagnosis}} and {{Management}} of {{Mild Cognitive Impairment}}: {{A Clinical Review}}}, + shorttitle = {The {{Diagnosis}} and {{Management}} of {{Mild Cognitive Impairment}}}, + author = {Langa, Kenneth M. and Levine, Deborah A.}, + date = {2014-12-17}, + journaltitle = {JAMA}, + shortjournal = {JAMA}, + volume = {312}, + number = {23}, + pages = {2551}, + issn = {0098-7484}, + doi = {10.1001/jama.2014.13806}, + abstract = {Importance—Cognitive decline is a common and feared aspect of aging. Mild Cognitive Impairment (MCI) is defined as the “symptomatic pre-dementia stage” on the continuum of cognitive decline, characterized by objective impairment in cognition that is not severe enough to require help with usual activities of daily living.}, + langid = {english}, + file = {/home/src/Offline/Papers/langa_levine_2014_the diagnosis and management of mild cognitive impairment.pdf} +} + +@article{lansford1998satisfaction, + title = {Satisfaction with Social Networks: {{An}} Examination of Socioemotional Selectivity Theory across Cohorts.}, + author = {Lansford, Jennifer E and Sherman, Aurora M and Antonucci, Toni C}, + date = {1998}, + journaltitle = {Psychology and aging}, + shortjournal = {Psychol. Aging}, + volume = {13}, + number = {4}, + pages = {544}, + publisher = {{American Psychological Association}} +} + +@misc{lantzCoOccurringConditionsIndividuals2020, + title = {Co-{{Occurring Conditions}} in {{Individuals}} with {{Complex Forms}} of {{Autism Spectrum Disorder}}}, + author = {Lantz, Johanna and Hamlin, Theresa and Villavicencio, Tanya}, + date = {2020}, + publisher = {{The Center for Discovery}}, + file = {/home/src/Offline/Papers/lantz et al_2020_co-occurring conditions in individuals with complex forms of autism spectrum.pdf} +} + +@online{larcNASAFollowWater, + title = {{{NASA}} - {{Follow}} the {{Water}}:{$<$}br /{$>$}{{Finding}} a {{Perfect Match}} for {{Life}}}, + shorttitle = {{{NASA}} - {{Follow}} the {{Water}}}, + author = {LaRC, Bob Allen :}, + url = {https://www.nasa.gov/vision/earth/everydaylife/jamestown-water-fs.html}, + urldate = {2015-12-07}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/HZK5VFXG/jamestown-water-fs.html} +} + +@article{larson2001prevalence, + title = {Prevalence of Mental Retardation and Developmental Disabilities: Estimates from the 1994/1995 {{National Health Interview Survey Disability Supplements}}}, + author = {Larson, Sheryl A and Lakin, K Charlie and Anderson, Lynda and Kwak Lee, Nohoon and Lee, Jeoung Hak and Anderson, Deborah}, + date = {2001}, + journaltitle = {American Journal on Mental Retardation}, + shortjournal = {Am. J. Ment. Retard.}, + volume = {106}, + number = {3}, + pages = {231--252} +} + +@article{launer1992european, + title = {{{EUROPEAN STUDIES ON THE INCIDENCE OF DEMENTING DISEASE-PREFACE}}}, + author = {Launer, LJ and Brayne, C and Dartigues, JF and Hofman, A}, + date = {1992}, + publisher = {{KARGER ALLSCHWILERSTRASSE 10, CH-4009 BASEL, SWITZERLAND}}, + keywords = {\#nosource} +} + +@article{laveryWickedProblemsCommunity2016, + title = {‘{{Wicked}} Problems’, Community Engagement and the Need for an Implementation Science for Research Ethics}, + author = {Lavery, James}, + date = {2016-08-18}, + journaltitle = {Journal of Medical Ethics}, + shortjournal = {J. Med. Ethics}, + volume = {0}, + number = {0}, + file = {/home/jacob/Dropbox/Papers/Lavery - 2016 - ‘Wicked problems’, community engagement and the ne.pdf} +} + +@article{lawtonAssessmentOlderPeople, + title = {Assessment of {{Older People}}: {{Self-Maintaining}} and {{Instrumental Activities}} of {{Daily Living}}}, + author = {Lawton, M Powell and Brody, Elaine M}, + pages = {8}, + langid = {english}, + file = {/home/src/Offline/Papers/lawton_brody_assessment of older people.pdf} +} + +@article{lay2016linear, + title = {Linear {{Algebra}} and Its Applications 5th Edition}, + author = {Lay, David C}, + date = {2016}, + publisher = {{Pearson}} +} + +@article{lay2016linear, + title = {Linear {{Algebra}} and Its Applications 5th Edition}, + author = {Lay, David C}, + date = {2016}, + publisher = {{Pearson}} +} + +@article{le2005use, + title = {The Use of Severity Scores in the Intensive Care Unit}, + author = {Le Gall, Jean-Roger}, + date = {2005}, + journaltitle = {Intensive care medicine}, + shortjournal = {Intensive Care Med.}, + volume = {31}, + number = {12}, + pages = {1618--1623}, + publisher = {{Springer}} +} + +@online{LearnFastForget, + title = {Learn Fast and Forget about Forgetting | {{SuperMemo}}.Com}, + url = {https://www.supermemo.com/en}, + urldate = {2020-06-07}, + file = {/home/cedarprince/Zotero/storage/FZK6JDW8/en.html} +} + +@online{LearnLanguageFree, + title = {Learn a Language for Free}, + url = {https://www.duolingo.com/}, + urldate = {2020-06-07}, + abstract = {With our free mobile app or web and a few minutes a day, everyone can Duolingo. Learn 30+ languages online with bite-size lessons based on science.}, + langid = {english}, + organization = {{Duolingo}}, + file = {/home/cedarprince/Zotero/storage/Z9QV6M9L/www.duolingo.com.html} +} + +@article{leclerc2020settings, + title = {What Settings Have Been Linked to {{SARS-CoV-2}} Transmission Clusters?}, + author = {Leclerc, Quentin J and Fuller, Naomi M and Knight, Lisa E and Funk, Sebastian and Knight, Gwenan M and Group, CMMID COVID-19 Working and others}, + date = {2020}, + journaltitle = {Wellcome Open Research}, + shortjournal = {Wellcome Open Res.}, + volume = {5}, + number = {83}, + pages = {83}, + publisher = {{F1000 Research Limited}} +} + +@dataset{lecrubierMiniInternationalNeuropsychiatric2013, + title = {Mini {{International Neuropsychiatric Interview}}}, + author = {Lecrubier, Y. and Sheehan, D. V. and Weiller, E. and Amorim, P. and Bonora, I. and Sheehan, K. Harnett and Janavs, J. and Dunbar, G. C.}, + date = {2013-07-08}, + doi = {10.1037/t18597-000}, + langid = {english}, + keywords = {schizophrenia}, + file = {/Users/jzelko3/Knowledgebase/Papers/lecrubier et al_2013_mini international neuropsychiatric interview.pdf} +} + +@article{lehnertSpatialExplorationCDC2020, + title = {Spatial Exploration of the {{CDC}}'s {{Social Vulnerability Index}} and Heat-Related Health Outcomes in {{Georgia}}}, + author = {Lehnert, Erica Adams}, + date = {2020}, + journaltitle = {International Journal of Disaster Risk Reduction}, + shortjournal = {Int. J. Disaster Risk Reduct.}, + pages = {7}, + abstract = {Heat-related illness, an environmental exposure-related outcome commonly treated in U.S. hospital emergency departments (ED), is likely to rise with increased incidence of heat events related to climate change. Few studies demonstrate the spatial and statistical relationship of social vulnerability and heat-related health outcomes.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/9V97AGY6/Lehnert_2020_Spatial exploration of the CDC's Social Vulnerability Index and heat-related.pdf} +} + +@unpublished{lenzJuliaConnectoRFunctionallyOriented2021, + title = {The {{JuliaConnectoR}}: A Functionally Oriented Interface for Integrating {{Julia}} in {{R}}}, + shorttitle = {The {{JuliaConnectoR}}}, + author = {Lenz, Stefan and Hackenberg, Maren and Binder, Harald}, + date = {2021-03-29}, + shortjournal = {ArXiv200506334 Cs Stat}, + eprint = {2005.06334}, + eprinttype = {arxiv}, + primaryclass = {cs, stat}, + url = {http://arxiv.org/abs/2005.06334}, + urldate = {2021-08-13}, + abstract = {Like many groups considering the new programming language Julia, we faced the challenge of accessing the algorithms that we develop in Julia from R. Therefore, we developed the R package JuliaConnectoR, available from the CRAN repository and GitHub (https://github.com/stefan-m-lenz/JuliaConnectoR), in particular for making advanced deep learning tools available. For maintainability and stability, we decided to base communication between R and Julia on TCP, using an optimized binary format for exchanging data. Our package also specifically contains features that allow for a convenient interactive use in R. This makes it easy to develop R extensions with Julia or to simply call functionality from Julia packages in R. Interacting with Julia objects and calling Julia functions becomes user-friendly, as Julia functions and variables are made directly available as objects in the R workspace. We illustrate the further features of our package with code examples, and also discuss advantages over the two alternative packages JuliaCall and XRJulia. Finally, we demonstrate the usage of the package with a more extensive example for employing neural ordinary differential equations, a recent deep learning technique that has received much attention. This example also provides more general guidance for integrating deep learning techniques from Julia into R.}, + archiveprefix = {arXiv}, + keywords = {Computer Science - Machine Learning,Computer Science - Mathematical Software,Computer Science - Programming Languages,Statistics - Computation,Statistics - Machine Learning}, + file = {/home/cedarprince/Zotero/storage/59UB5Q87/Lenz et al_2021_The JuliaConnectoR.pdf;/home/cedarprince/Zotero/storage/XE2WX66A/2005.html} +} + +@article{leskoFrameworkDescriptiveEpidemiology2022, + title = {A Framework for Descriptive Epidemiology}, + author = {Lesko, Catherine and Fox, Matthew and Edwards, Jessie}, + date = {2022}, + journaltitle = {American Journal of Epidemiology}, + shortjournal = {Am. J. Epidemiol.}, + keywords = {_tablet}, + file = {/home/cedarprince/Zotero/storage/T9Q59DVY/Lesko et al_2022_A framework for descriptive epidemiology.pdf} +} + +@book{lewis1991four, + title = {The Four Loves}, + author = {Lewis, Clive Staples}, + date = {1991}, + publisher = {{Houghton Mifflin Harcourt}} +} + +@article{lewisHowHealthSystems2013, + title = {How {{Health Systems Could Avert}} ‘{{Triple Fail}}’ {{Events That Are Harmful}}, {{Are Costly}}, {{And Result In Poor Patient Satisfaction}}}, + author = {Lewis, Geraint and Kirkham, Heather and Duncan, Ian and Vaithianathan, Rhema}, + date = {2013}, + journaltitle = {Health Affairs}, + shortjournal = {Health Aff. (Millwood)}, + volume = {32}, + number = {4}, + file = {/home/src/Offline/Papers/lewis et al_2013_how health systems could avert ‘triple fail’ events that are harmful, are.pdf} +} + +@article{liDigitalHealthTracking2017, + title = {Digital {{Health}}: {{Tracking Physiomes}} and {{Activity Using Wearable Biosensors Reveals Useful Health-Related Information}}}, + shorttitle = {Digital {{Health}}}, + author = {Li, Xiao and Dunn, Jessilyn and Salins, Denis and Zhou, Gao and Zhou, Wenyu and Schüssler-Fiorenza Rose, Sophia Miryam and Perelman, Dalia and Colbert, Elizabeth and Runge, Ryan and Rego, Shannon and Sonecha, Ria and Datta, Somalee and McLaughlin, Tracey and Snyder, Michael P.}, + editor = {Kirkwood, Thomas}, + date = {2017-01-12}, + journaltitle = {PLOS Biology}, + shortjournal = {PLoS Biol}, + volume = {15}, + number = {1}, + pages = {e2001402}, + issn = {1545-7885}, + doi = {10.1371/journal.pbio.2001402}, + abstract = {A new wave of portable biosensors allows frequent measurement of health-related physiology. We investigated the use of these devices to monitor human physiological changes during various activities and their role in managing health and diagnosing and analyzing disease. By recording over 250,000 daily measurements for up to 43 individuals, we found personalized circadian differences in physiological parameters, replicating previous physiological findings. Interestingly, we found striking changes in particular environments, such as airline flights (decreased peripheral capillary oxygen saturation [SpO2] and increased radiation exposure). These events are associated with physiological macro-phenotypes such as fatigue, providing a strong association between reduced pressure/oxygen and fatigue on high-altitude flights. Importantly, we combined biosensor information with frequent medical measurements and made two important observations: First, wearable devices were useful in identification of early signs of Lyme disease and inflammatory responses; we used this information to develop a personalized, activity-based normalization framework to identify abnormal physiological signals from longitudinal data for facile disease detection. Second, wearables distinguish physiological differences between insulin-sensitive and -resistant individuals. Overall, these results indicate that portable biosensors provide useful information for monitoring personal activities and physiology and are likely to play an important role in managing health and enabling affordable health care access to groups traditionally limited by socioeconomic class or remote geography.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Li et al_2017_Digital Health.pdf} +} + +@article{liDigitalHealthTracking2017a, + title = {Digital {{Health}}: {{Tracking Physiomes}} and {{Activity Using Wearable Biosensors Reveals Useful Health-Related Information}}}, + shorttitle = {Digital {{Health}}}, + author = {Li, Xiao and Dunn, Jessilyn and Salins, Denis and Zhou, Gao and Zhou, Wenyu and Schüssler-Fiorenza Rose, Sophia Miryam and Perelman, Dalia and Colbert, Elizabeth and Runge, Ryan and Rego, Shannon and Sonecha, Ria and Datta, Somalee and McLaughlin, Tracey and Snyder, Michael P.}, + editor = {Kirkwood, Thomas}, + date = {2017-01-12}, + journaltitle = {PLOS Biology}, + shortjournal = {PLoS Biol}, + volume = {15}, + number = {1}, + pages = {e2001402}, + issn = {1545-7885}, + doi = {10.1371/journal.pbio.2001402}, + abstract = {A new wave of portable biosensors allows frequent measurement of health-related physiology. We investigated the use of these devices to monitor human physiological changes during various activities and their role in managing health and diagnosing and analyzing disease. By recording over 250,000 daily measurements for up to 43 individuals, we found personalized circadian differences in physiological parameters, replicating previous physiological findings. Interestingly, we found striking changes in particular environments, such as airline flights (decreased peripheral capillary oxygen saturation [SpO2] and increased radiation exposure). These events are associated with physiological macro-phenotypes such as fatigue, providing a strong association between reduced pressure/oxygen and fatigue on high-altitude flights. Importantly, we combined biosensor information with frequent medical measurements and made two important observations: First, wearable devices were useful in identification of early signs of Lyme disease and inflammatory responses; we used this information to develop a personalized, activity-based normalization framework to identify abnormal physiological signals from longitudinal data for facile disease detection. Second, wearables distinguish physiological differences between insulin-sensitive and -resistant individuals. Overall, these results indicate that portable biosensors provide useful information for monitoring personal activities and physiology and are likely to play an important role in managing health and enabling affordable health care access to groups traditionally limited by socioeconomic class or remote geography.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/C6KPB4ZD/Li et al. - 2017 - Digital Health Tracking Physiomes and Activity Us.pdf} +} + +@article{liHowMakeThat2018, + title = {How to {{Make A}}.{{I}}. {{That}}'s {{Good}} for {{People}}}, + author = {Li, Fei-Fei}, + date = {2018-03-07}, + journaltitle = {The New York Times}, + entrysubtype = {newspaper}, + journalsubtitle = {Opinion}, + keywords = {artificial-intelligence,ethics,human-centered-ai}, + file = {/home/jacob/Papers/How to Make A.I. That’s Good for People.html} +} + +@article{lindsayEvaluatingDisinfectantEfficacy2015, + title = {Evaluating Disinfectant Efficacy of a Silver-Based Disinfectant}, + author = {Lindsay, John M.}, + date = {2015}, + journaltitle = {Pharmaceutical Technology}, + number = {5}, + pages = {42}, + issn = {1543-2521}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edsgao&AN=edsgcl.417310176&site=eds-live&scope=site}, + abstract = {A disinfectant composed of a low-concentration suspension of silver ions is a quick-acting sporicidal disinfectant that is non-corrosive, is skin-safe (non-toxic), and is not a respiratory irritant. The disinfectant was [...]}, + entrysubtype = {magazine}, + keywords = {\#nosource,Antimicrobial,Disinfectants,Noble metals,Silver}, + annotation = {Database: Academic OneFile} +} + +@article{lindseyTrendsSuicidalBehaviors2019, + title = {Trends of {{Suicidal Behaviors Among High School Students}} in the {{United States}}: 1991–2017}, + shorttitle = {Trends of {{Suicidal Behaviors Among High School Students}} in the {{United States}}}, + author = {Lindsey, Michael A. and Sheftall, Arielle H. and Xiao, Yunyu and Joe, Sean}, + date = {2019-11-01}, + journaltitle = {Pediatrics}, + shortjournal = {Pediatrics}, + volume = {144}, + number = {5}, + pages = {e20191187}, + issn = {0031-4005}, + doi = {10.1542/peds.2019-1187}, + abstract = {10.1542/6138651475001Video AbstractPEDS-VA\_2019-11876138651475001To determine if racial and ethnic subgroups of adolescents are at high risk for engagement in suicidal behaviors.Using the nationally representative school-based Youth Risk Behavior Survey from the years 1991 to 2017, we conducted logistic regression analyses to examine trends by different racial and ethnic groups, with each suicide indicator serving as a dichotomous outcome. Participants included 198\,540 high school students.Across all sex and race and ethnic groups, there were significant linear decreases in self-reported suicidal ideation and suicide plans from 1991 to 2017. Female adolescents (odds ratio [OR], 0.98; P \< .001) had significant decreases in attempts over time. Black adolescents had positive linear trends for suicide attempts among both boys (OR, 1.04; P \< .001) and girls (OR, 1.02; P = .003). Black adolescent boys (OR, 1.04; P = .048) had a significant linear increase in injury by attempt.The results suggest that, over time, black youth have experienced an increase in suicide attempts, which is troubling because attempts are the most prominent risk factor associated with suicide death. For black boys, a significant increase in injury by attempt occurred, which suggests that black boys may be engaging in increasingly lethal means when attempting suicide. Examining trends of suicidal thoughts and behaviors over time by sex and race and ethnicity allow us to determine where to focus prevention and intervention efforts. Future research should examine the underlying reasons for these changes observed in US high school students.}, + file = {/Users/jzelko3/Knowledgebase/Papers/Lindsey et al_2019_Trends of Suicidal Behaviors Among High School Students in the United States.pdf;/home/cedarprince/Zotero/storage/2D7X33F3/Trends-of-Suicidal-Behaviors-Among-High-School.html} +} + +@article{linton1975memory, + title = {Memory for Real-World Events}, + author = {Linton, Marigold}, + date = {1975}, + journaltitle = {Explorations in cognition}, + shortjournal = {Explor. Cogn.}, + pages = {376--404} +} + +@online{LiPolymer5035621200mAh, + title = {Li-{{Polymer}} 503562 {{1200mAh}} 3.{{7V}} with {{PCM}}}, + url = {https://cdn-shop.adafruit.com/product-files/258/C101-_Li-Polymer_503562_1200mAh_3.7V_with_PCM_APPROVED_8.18.pdf}, + urldate = {2020-04-27}, + file = {/home/src/Offline/Papers/li-polymer 503562 1200mah 3.pdf} +} + +@online{lipsitchOpinionWhyIt, + title = {Opinion | {{Why}} It’s so Hard to Pin down the Risk of Dying from Coronavirus}, + author = {Lipsitch, Marc}, + url = {https://www.washingtonpost.com/opinions/2020/03/06/why-its-so-hard-pin-down-risk-dying-coronavirus/}, + urldate = {2020-03-10}, + abstract = {Scientists are doing their best to make sense of imperfect data.}, + langid = {english}, + organization = {{Washington Post}}, + file = {/home/cedarprince/Zotero/storage/GREJYBPV/www.washingtonpost.com.html} +} + +@book{lipsonHowWriteBA2005, + title = {How to {{Write}} a {{BA Thesis}}: {{A Practical Guide}} from {{Your First Ideas}} to {{Your Finished Paper}}}, + shorttitle = {How to {{Write}} a {{BA Thesis}}}, + author = {Lipson, Charles}, + date = {2005}, + publisher = {{University of Chicago Press}}, + doi = {10.7208/chicago/9780226481272.001.0001}, + isbn = {978-0-226-48126-5 978-0-226-48125-8 978-0-226-48127-2}, + langid = {english}, + file = {/home/src/Offline/Papers/lipson_2005_how to write a ba thesis.pdf} +} + +@article{litvanDiagnosticCriteriaMild2012, + title = {Diagnostic Criteria for Mild Cognitive Impairment in {{Parkinson}}'s Disease: {{Movement Disorder Society Task Force}} Guidelines}, + shorttitle = {Diagnostic Criteria for Mild Cognitive Impairment in {{Parkinson}}'s Disease}, + author = {Litvan, Irene and Goldman, Jennifer G. and Tröster, Alexander I. and Schmand, Ben A. and Weintraub, Daniel and Petersen, Ronald C. and Mollenhauer, Brit and Adler, Charles H. and Marder, Karen and Williams-Gray, Caroline H. and Aarsland, Dag and Kulisevsky, Jaime and Rodriguez-Oroz, Maria C. and Burn, David J. and Barker, Roger A. and Emre, Murat}, + date = {2012-03}, + journaltitle = {Movement Disorders}, + shortjournal = {Mov. Disord.}, + volume = {27}, + number = {3}, + pages = {349--356}, + issn = {08853185}, + doi = {10.1002/mds.24893}, + langid = {english}, + file = {/home/src/Offline/Papers/litvan et al_2012_diagnostic criteria for mild cognitive impairment in parkinson's disease.pdf} +} + +@article{loboZARADEMPProjectIncidence2005, + title = {The {{ZARADEMP Project}} on the Incidence, Prevalence and Risk Factors of Dementia (and Depression) in the Elderly Community:}, + author = {Lobo, Antonio and Saz, Pedro and Marcos, Guillermo and Dia, José-Luis and De-la-Cámara, Concepción and Ventura, Tirso and Angel Montañés, José and Lobo-Escolar, Antonio and Aznar, Sergio}, + date = {2005}, + journaltitle = {European Psychiatry}, + shortjournal = {Eur. Psychiatry}, + volume = {19}, + number = {1}, + pages = {40--54}, + file = {/home/src/Offline/Papers/lobo et al_2005_the zarademp project on the incidence, prevalence and risk factors of dementia.pdf} +} + +@article{lochlainn2020key, + title = {Key Predictors of Attending Hospital with {{COVID19}}: {{An}} Association Study from the {{COVID Symptom Tracker App}} in 2,618,948 Individuals}, + author = {Lochlainn, Mary Ni and Lee, Karla A and Sudre, Carole H and Varsavsky, Thomas and Cardoso, M Jorge and Menni, Cristina and Bowyer, Ruth CE and Nguyen, Long H and Drew, David Alden and Ganesh, Sajaysurya and others}, + date = {2020}, + journaltitle = {medRxiv}, + publisher = {{Cold Spring Harbor Laboratory Press}} +} + +@article{lorensenMarchingCubesHigh1987, + title = {Marching {{Cubes}}: {{A High Resolution}} 3d {{Surface Construction Algorithm}}}, + author = {Lorensen, William E and Cline, Harvey E}, + date = {1987}, + journaltitle = {Computer Graphics}, + shortjournal = {Comput. Graph.}, + pages = {7}, + abstract = {We present a new algorithm, called marching cubes, that creates triangle models of constant density surfaces from 3D medical data. Using a divide-and-conquer approach to generate inter-slice connectivity, we create a case table that defines triangle topology. The algorithm processes the 3D medical data in scan-line order and calculates triangle vertices using linear interpolation. We find the gradient of the original data, normalize it, and use it as a basis for shading the models. The detail in images produced from the generated surface models is the result of maintaining the inter-slice connectivity, surface data, and gradient information present in the original 3D data. Results from computed tomography (CT), magnetic resonance (MR), and single-photon emission computed tomography (SPECT) illustrate the quality and functionality of marching cubes. We also discuss improvements that decrease processing time and add solid modeling capabilities.}, + langid = {english}, + file = {/home/src/Papers/lorensen_cline_1987_marching cubes.pdf} +} + +@online{ltdIPEnclosureRatings2020, + title = {{{IP Enclosure Ratings}} \& {{Standards}}, {{IP66}}, {{IP65}}, {{IP55}}, {{IP54}}}, + author = {Ltd, Rainford Solutions}, + date = {2020-01-08T14:47:34+00:00}, + url = {https://www.rainfordsolutions.com/ip-enclosure-ratings-and-standards}, + urldate = {2020-02-11}, + abstract = {IP Enclosure Ratings \& Standards Explained, IP66, IP65, IP55, IP54}, + langid = {british}, + organization = {{Rainford Solutions Ltd}}, + file = {/home/cedarprince/Zotero/storage/UZPY8ETZ/ip-enclosure-ratings-and-standards.html} +} + +@article{lucasReportingMentalHealth2017, + title = {Reporting {{Mental Health Symptoms}}: {{Breaking Down Barriers}} to {{Care}} with {{Virtual Human Interviewers}}}, + shorttitle = {Reporting {{Mental Health Symptoms}}}, + author = {Lucas, Gale M. and Rizzo, Albert and Gratch, Jonathan and Scherer, Stefan and Stratou, Giota and Boberg, Jill and Morency, Louis-Philippe}, + date = {2017-10-12}, + journaltitle = {Frontiers in Robotics and AI}, + shortjournal = {Front. Robot. AI}, + volume = {4}, + pages = {51}, + issn = {2296-9144}, + doi = {10.3389/frobt.2017.00051}, + abstract = {A common barrier to healthcare for psychiatric conditions is the stigma associated with these disorders. Perceived stigma prevents many from reporting their symptoms. Stigma is a particularly pervasive problem among military service members, preventing them from reporting symptoms of combat-related conditions like posttraumatic stress disorder (PTSD). However, research shows (increased reporting by service members when anonymous assessments are used. For example, service members report more symptoms of PTSD when they anonymously answer the Post-Deployment Health Assessment (PDHA) symptom checklist compared to the official PDHA, which is identifiable and linked to their military records. To investigate the factors that influence reporting of psychological symptoms by service members, we used a transformative technology: automated virtual humans that interview people about their symptoms. Such virtual human interviewers allow simultaneous use of two techniques for eliciting disclosure that would otherwise be incompatible; they afford anonymity while also building rapport. We examined whether virtual human interviewers could increase disclosure of mental health symptoms among active-duty service members that just returned from a yearlong deployment in Afghanistan. Service members reported more symptoms during a conversation with a virtual human interviewer than on the official PDHA. They also reported more to a virtual human interviewer than on an anonymized PDHA. A second, larger sample of active-duty and former service members found a similar effect that approached statistical significance. Because respondents in both studies shared more with virtual human interviewers than an anonymized PDHA—even though both conditions control for stigma and ramifications for service members’ military records—virtual human interviewers that build rapport may provide a superior option to encourage reporting.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/F94NQUM7/Lucas et al. - 2017 - Reporting Mental Health Symptoms Breaking Down Ba.pdf} +} + +@article{ludvigsson2013use, + title = {Use of Computerized Algorithm to Identify Individuals in Need of Testing for Celiac Disease}, + author = {Ludvigsson, Jonas F and Pathak, Jyotishman and Murphy, Sean and Durski, Matthew and Kirsch, Phillip S and Chute, Christophe G and Ryu, Euijung and Murray, Joseph A}, + date = {2013}, + journaltitle = {Journal of the American Medical Informatics Association}, + shortjournal = {J. Am. Med. Inform. Assoc.}, + volume = {20}, + number = {e2}, + pages = {e306--e310}, + publisher = {{BMJ Publishing Group BMA House, Tavistock Square, London, WC1H 9JR}} +} + +@article{luhmannCommunicatingSlipBoxes, + title = {Communicating with {{Slip Boxes}}}, + author = {Luhmann, Niklas}, + pages = {6}, + langid = {english}, + file = {/home/src/Offline/Papers/luhmann_communicating with slip boxes.pdf} +} + +@article{luhmannLearningHowRead, + title = {Learning {{How}} to {{Read}}}, + author = {Luhmann, Niklas}, + pages = {3}, + langid = {english}, + file = {/home/src/Offline/Papers/luhmann_learning how to read.pdf} +} + +@unpublished{luukkonenLSTMBasedPredictionsProactive2016, + title = {{{LSTM-Based Predictions}} for {{Proactive Information Retrieval}}}, + author = {Luukkonen, Petri and Koskela, Markus and Floréen, Patrik}, + date = {2016-06-20}, + shortjournal = {ArXiv160606137 Cs}, + eprint = {1606.06137}, + eprinttype = {arxiv}, + primaryclass = {cs}, + url = {http://arxiv.org/abs/1606.06137}, + urldate = {2020-02-10}, + abstract = {We describe a method for proactive information retrieval targeted at retrieving relevant information during a writing task. In our method, the current task and the needs of the user are estimated, and the potential next steps are unobtrusively predicted based on the user’s past actions. We focus on the task of writing, in which the user is coalescing previously collected information into a text. Our proactive system automatically recommends the user relevant background information. The proposed system incorporates text input prediction using a long short-term memory (LSTM) network. We present simulations, which show that the system is able to reach higher precision values in an exploratory search setting compared to both a baseline and a comparison system.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {Computer Science - Computation and Language,Computer Science - Information Retrieval,Computer Science - Neural and Evolutionary Computing}, + file = {/home/src/Offline/Papers/luukkonen et al_2016_lstm-based predictions for proactive information retrieval.pdf} +} + +@book{mac2013categories, + title = {Categories for the Working Mathematician}, + author = {Mac Lane, Saunders}, + date = {2013}, + volume = {5}, + publisher = {{Springer Science \& Business Media}} +} + +@article{maclean2009interactions, + title = {Interactions between Endogenous and Exogenous Attention during Vigilance}, + author = {MacLean, Katherine A and Aichele, Stephen R and Bridwell, David A and Mangun, George R and Wojciulik, Ewa and Saron, Clifford D}, + date = {2009}, + journaltitle = {Attention, Perception, \& Psychophysics}, + shortjournal = {Atten. Percept. Psychophys.}, + volume = {71}, + number = {5}, + pages = {1042--1058}, + publisher = {{Springer}} +} + +@online{macymichellel.SPROUTCOVID19Measure2020, + title = {{{SPROUT COVID-19 Measure Framework}}}, + author = {{Macy, Michelle L.} and {Dana Aronson Schinasi} and {David McSwain} and {John Chuo}}, + date = {2020-03-24}, + url = {https://research.musc.edu/-/sm/research/resources/sctr/f/sprout-telehealth-measurement-framework-for-covid-19.ashx?la=en}, + urldate = {2022-05-02}, + file = {/home/cedarprince/Zotero/storage/HH3E5J3Q/sprout-telehealth-measurement-framework-for-covid-19.pdf} +} + +@online{magnuskiHowPlotTopomaps, + title = {How to Plot Topomaps the Way {{EEGLAB}} Does — {{MNE}} 0.21.2 Documentation}, + author = {Magnuski, Mikołaj}, + url = {https://mne.tools/stable/auto_examples/visualization/plot_eeglab_head_sphere.html?highlight=topoplot}, + urldate = {2020-12-07}, + file = {/home/cedarprince/Zotero/storage/P4C74ZTK/plot_eeglab_head_sphere.html} +} + +@online{magnuskiHowPlotTopomaps2020, + title = {How to Plot Topomaps the Way {{EEGLAB}} Does}, + author = {Magnuski, Mikołaj}, + date = {2020-03-27}, + url = {https://mne.tools/stable/auto_examples/visualization/plot_eeglab_head_sphere.html#sphx-glr-auto-examples-visualization-plot-eeglab-head-sphere-py}, + urldate = {2020-11-04}, + file = {/home/cedarprince/Zotero/storage/ACJ8XL6V/plot_eeglab_head_sphere.html} +} + +@article{majeed2009spatiotemporal, + title = {Spatiotemporal Dynamics of Low Frequency Fluctuations in {{BOLD fMRI}} of the Rat}, + author = {Majeed, Waqas and Magnuson, Matthew and Keilholz, Shella D}, + date = {2009}, + journaltitle = {Journal of Magnetic Resonance Imaging: An Official Journal of the International Society for Magnetic Resonance in Medicine}, + shortjournal = {J. Magn. Reson. Imaging Off. J. Int. Soc. Magn. Reson. Med.}, + volume = {30}, + number = {2}, + pages = {384--393}, + publisher = {{Wiley Online Library}} +} + +@article{makadyWhatRealWorldData2017, + title = {What {{Is Real-World Data}}? {{A Review}} of {{Definitions Based}} on {{Literature}} and {{Stakeholder Interviews}}}, + shorttitle = {What {{Is Real-World Data}}?}, + author = {Makady, Amr and de Boer, Anthonius and Hillege, Hans and Klungel, Olaf and Goettsch, Wim}, + options = {useprefix=true}, + date = {2017-07}, + journaltitle = {Value in Health}, + shortjournal = {Value in Health}, + volume = {20}, + number = {7}, + pages = {858--865}, + issn = {10983015}, + doi = {10.1016/j.jval.2017.03.008}, + abstract = {Background: Despite increasing recognition of the value of real-world data (RWD), consensus on the definition of RWD is lacking. Objectives: To review definitions publicly available for RWD to shed light on similarities and differences between them. Methods: A literature review and stakeholder interviews were used to compile data from eight groups of stakeholders. Data from documents and interviews were subjected to coding analysis. Definitions identified were classified into four categories: 1) data collected in a non-randomized controlled trial setting, 2) data collected in a non-interventional/ non-controlled setting, 3) data collected in a non-experimental setting, and 4) others (i.e., data that do not fit into the other three categories). The frequency of definitions identified per category was recorded. Results: Fifty-three documents and 20 interviews were assessed. Thirty-eight definitions were identified: 20 out of 38 definitions (53\%) were category 1 definitions, 9 (24\%) were category 2 definitions, 5 (13\%) were category 3 definitions, and 4 (11\%) were category 4 definitions. Differences were identified between, and within, definition categories.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Makady et al_2017_What Is Real-World Data.pdf} +} + +@article{makeig1999functionally, + title = {Functionally Independent Components of the Late Positive Event-Related Potential during Visual Spatial Attention}, + author = {Makeig, Scott and Westerfield, Marissa and Jung, Tzyy-Ping and Covington, James and Townsend, Jeanne and Sejnowski, Terrence J and Courchesne, Eric}, + date = {1999}, + journaltitle = {Journal of Neuroscience}, + shortjournal = {J. Neurosci.}, + volume = {19}, + number = {7}, + pages = {2665--2680}, + publisher = {{Soc Neuroscience}} +} + +@online{MakingThingsHardonYourselfbutinaGoodWay2011Pdf, + title = {Making-{{Things-Hard-on-Yourself-but-in-a-Good-Way-2011}}.Pdf}, + url = {https://teaching.yale-nus.edu.sg/wp-content/uploads/sites/25/2016/02/Making-Things-Hard-on-Yourself-but-in-a-Good-Way-2011.pdf}, + urldate = {2020-05-19} +} + +@article{malowSleepDisturbancesAutism2008, + title = {Sleep {{Disturbances}} and {{Autism}}}, + author = {Malow, Beth A. and McGrew, Susan G.}, + date = {2008}, + journaltitle = {Sleep Medicine Clinics}, + shortjournal = {Sleep Med. Clin.}, + volume = {3}, + number = {3}, + pages = {479--488}, + doi = {10.1016/j.jsmc.2008.04.004}, + keywords = {autism,sleep}, + file = {/home/cedarprince/Zotero/storage/HNIM86YN/Malow_McGrew_2008_Sleep Disturbances and Autism.pdf;/home/cedarprince/Zotero/storage/VSNXARDZ/Malow_McGrew_2008_Sleep Disturbances and Autism.pdf;/home/src/Offline/Papers/malow_mcgrew_2008_sleep disturbances and autism.pdf;/home/src/Offline/Papers/malow_mcgrew_2008_sleep disturbances and autism2.pdf} +} + +@article{mammarella2002spacing, + title = {Spacing Effects in Cued-Memory Tasks for Unfamiliar Faces and Nonwords}, + author = {Mammarella, Nicola and Russo, Riccardo and Avons, SE}, + date = {2002}, + journaltitle = {Memory \& cognition}, + shortjournal = {Mem. Cognit.}, + volume = {30}, + number = {8}, + pages = {1238--1251}, + publisher = {{Springer}} +} + +@article{manly1999absent, + title = {The Absent Mind:: Further Investigations of Sustained Attention to Response}, + author = {Manly, Tom and Robertson, Ian H and Galloway, Maria and Hawkins, Kari}, + date = {1999}, + journaltitle = {Neuropsychologia}, + volume = {37}, + number = {6}, + pages = {661--670}, + publisher = {{Elsevier}} +} + +@article{mann2018left, + title = {Left to Other Peoples’ Devices? {{A}} Political Economy Perspective on the Big Data Revolution in Development}, + author = {Mann, Laura}, + date = {2018}, + journaltitle = {Development and Change}, + shortjournal = {Dev. Change}, + volume = {49}, + number = {1}, + pages = {3--36}, + publisher = {{Wiley Online Library}} +} + +@article{marchaisDataGoldWe2020, + title = {‘{{The}} Data Is Gold, and We Are the Gold-Diggers’: Whiteness, Race and Contemporary Academic Research in Eastern {{DRC}}}, + shorttitle = {‘{{The}} Data Is Gold, and We Are the Gold-Diggers’}, + author = {Marchais, Gauthier and Bazuzi, Paulin and Amani Lameke, Aimable}, + date = {2020-09-01}, + journaltitle = {Critical African Studies}, + shortjournal = {Critical African Studies}, + volume = {12}, + number = {3}, + pages = {372--394}, + issn = {2168-1392, 2040-7211}, + doi = {10.1080/21681392.2020.1724806}, + langid = {english}, + file = {/home/src/Papers/marchais et al_2020_‘the data is gold, and we are the gold-diggers’.pdf} +} + +@incollection{marchesiProkaryoticEukaryoticDiversity2010, + title = {Prokaryotic and {{Eukaryotic Diversity}} of the {{Human Gut}}}, + booktitle = {Advances in {{Applied Microbiology}}}, + author = {Marchesi, Julian R.}, + date = {2010}, + volume = {72}, + pages = {43--62}, + publisher = {{Elsevier}}, + doi = {10.1016/S0065-2164(10)72002-5}, + isbn = {978-0-12-380989-6}, + langid = {english}, + file = {/home/src/Offline/Papers/marchesi_2010_prokaryotic and eukaryotic diversity of the human gut.pdf} +} + +@article{marcod.hueschUsingItLosing, + title = {Using {{It}} or {{Losing It}}? {{The Case}} for {{Data Scientists Inside Health Care}}}, + author = {{Marco D. Huesch} and {Timothy J. Mosher}}, + url = {https://catalyst.nejm.org/doi/full/10.1056/CAT.17.0493}, + urldate = {2021-06-18} +} + +@inproceedings{mariakakisSAILSingleAccess2014, + title = {{{SAIL}}: Single Access Point-Based Indoor Localization}, + shorttitle = {{{SAIL}}}, + booktitle = {Proceedings of the 12th Annual International Conference on {{Mobile}} Systems, Applications, and Services - {{MobiSys}} '14}, + author = {Mariakakis, Alex T. and Sen, Souvik and Lee, Jeongkeun and Kim, Kyu-Han}, + date = {2014}, + pages = {315--328}, + publisher = {{ACM Press}}, + location = {{Bretton Woods, New Hampshire, USA}}, + doi = {10.1145/2594368.2594393}, + abstract = {This paper presents SAIL, a Single Access Point Based Indoor Localization system. Although there have been advances in WiFi-based positioning techniques, we find that existing solutions either require a dense deployment of access points (APs), manual fingerprinting, energy hungry WiFi scanning, or sophisticated AP hardware. We design SAIL using a single commodity WiFi AP to avoid these restrictions. SAIL computes the distance between the client and an AP using the propagation delay of the signal traversing between the two, combines the distance with smartphone dead-reckoning techniques, and employs geometric methods to ultimately yield the client’s location using a single AP. SAIL combines physical layer (PHY) information and human motion to compute the propagation delay of the direct path by itself, eliminating the adverse effect of multipath and yielding sub-meter distance estimation accuracy. Furthermore, SAIL systematically addresses some of the common challenges towards dead-reckoning using smartphone sensors and achieves 2 − 5x accuracy improvements over existing techniques. We have implemented SAIL on commodity wireless APs and smartphones. Evaluation in a large-scale enterprise environment with 10 mobile users demonstrates that SAIL can capture the user’s location with a mean error of 2.3m using just a single AP.}, + eventtitle = {The 12th Annual International Conference}, + isbn = {978-1-4503-2793-0}, + langid = {english}, + file = {/home/src/Offline/Papers/mariakakis et al_2014_sail.pdf} +} + +@article{marinoPredictorsOutpatientMental2016, + title = {Predictors of Outpatient Mental Health Clinic Follow‐up after Hospitalization among {{M}} Edicaid‐enrolled Young Adults}, + author = {Marino, Leslie and Wissow, Lawrence S. and Davis, Maryann and Abrams, Michael T. and Dixon, Lisa B. and Slade, Eric P.}, + date = {2016}, + journaltitle = {Early intervention in psychiatry}, + shortjournal = {Early Interv. Psychiatry}, + volume = {10}, + number = {6}, + pages = {468--475}, + publisher = {{Wiley Online Library}}, + isbn = {1751-7885} +} + +@article{marmot2004status, + title = {Status Syndrome}, + author = {Marmot, Michael}, + date = {2004}, + journaltitle = {Significance}, + volume = {1}, + number = {4}, + pages = {150--154}, + publisher = {{Wiley Online Library}} +} + +@book{marmotSocialDeterminantsHealth2006, + title = {Social {{Determinants}} of {{Health}}}, + author = {Marmot, Michael and Wilkinson, Richard}, + date = {2006}, + edition = {2}, + publisher = {{Oxford University Press}}, + file = {/home/src/Papers/marmot_wilkinson_2006_social determinants of health.pdf} +} + +@article{martinezAgileDevelopmentSmartphone, + title = {Agile {{Development}} of a {{Smartphone App}} for {{Perinatal Monitoring}} in a {{Resource-Constrained Setting}}}, + author = {Martinez, Boris and Hall-Clifford, Rachel and Coyote, Enma and Stroux, Lisa and Valderrama, Camilo E and Francis, Aaron and Hendren, Cate and Rohloff, Peter and Clifford, Gari D}, + pages = {19}, + abstract = {Technology provides the potential to empower frontline healthcare workers with low levels of training and literacy, particularly in low- and middle-income countries. An obvious platform for achieving this aim is the smartphone, a low cost, almost ubiquitous device with good supply chain infrastructure and a general cultural acceptance for its use. In particular, the smartphone offers the opportunity to provide augmented or procedural information through active audiovisual aids to illiterate or untrained users, as described in this article. In this article, the process of refinement and iterative design of a smartphone application prototype to support perinatal surveillance in rural Guatemala for indigenous Maya lay midwives with low levels of literacy and technology exposure is described. Following on from a pilot to investigate the feasibility of this system, a two-year project to develop a robust in-field system was initiated, culminating in a randomized controlled trial of the system, which is ongoing.}, + langid = {english}, + keywords = {cliffordlab}, + file = {/home/src/Offline/Papers/martinez et al_agile development of a smartphone app for perinatal monitoring in a.pdf} +} + +@article{martinezMHealthInterventionImprove2018, + ids = {martinezMHealthInterventionImprove2018a}, + title = {{{mHealth}} Intervention to Improve the Continuum of Maternal and Perinatal Care in Rural {{Guatemala}}: A Pragmatic, Randomized Controlled Feasibility Trial}, + shorttitle = {{{mHealth}} Intervention to Improve the Continuum of Maternal and Perinatal Care in Rural {{Guatemala}}}, + author = {Martinez, Boris and Ixen, Enma Coyote and Hall-Clifford, Rachel and Juarez, Michel and Miller, Ann C. and Francis, Aaron and Valderrama, Camilo E. and Stroux, Lisa and Clifford, Gari D. and Rohloff, Peter}, + date = {2018-12}, + journaltitle = {Reproductive Health}, + shortjournal = {Reprod Health}, + volume = {15}, + number = {1}, + pages = {120}, + issn = {1742-4755}, + doi = {10.1186/s12978-018-0554-z}, + abstract = {Background/objective: Guatemala’s indigenous Maya population has one of the highest perinatal and maternal mortality rates in Latin America. In this population most births are delivered at home by traditional birth attendants (TBAs), who have limited support and linkages to public hospitals. The goal of this study was to characterize the detection of maternal and perinatal complications and rates of facility-level referral by TBAs, and to evaluate the impact of a mHealth decision support system on these rates. Methods: A pragmatic one-year feasibility trial of an mHealth decisions support system was conducted in rural Maya communities in collaboration with TBAs. TBAs were individually randomized in an unblinded fashion to either early-access or later-access to the mHealth system. TBAs in the early-access arm used the mHealth system throughout the study. TBAs in the later-access arm provided usual care until crossing over uni-directionally to the mHealth system at the study midpoint. The primary study outcome was the monthly rate of referral to facility-level care, adjusted for birth volume. Results: Forty-four TBAs were randomized, 23 to the early-access arm and 21 to the later-access arm. Outcomes were analyzed for 799 pregnancies (early-access 425, later-access 374). Monthly referral rates to facility-level care were significantly higher among the early-access arm (median 33 referrals per 100 births, IQR 22–58) compared to the later-access arm (median 20 per 100, IQR 0–30) (p = 0.03). At the study midpoint, the later-access arm began using the mHealth platform and its referral rates increased (median 34 referrals per 100 births, IQR 5–50) with no significant difference from the early-access arm (p = 0.58). Rates of complications were similar in both arms, except for hypertensive disorders of pregnancy, which were significantly higher among TBAs in the early-access arm (RR 3.3, 95\% CI 1.10–9.86). Conclusions: Referral rates were higher when TBAs had access to the mHealth platform. The introduction of mHealth supportive technologies for TBAs is feasible and can improve detection of complications and timely referral to facility-care within challenging healthcare delivery contexts. Trial registration: Clinicaltrials.gov NCT02348840.}, + langid = {english}, + keywords = {cliffordlab}, + file = {/Users/jzelko3/Knowledgebase/Papers/martinez et al_2018_mhealth intervention to improve the continuum of maternal and perinatal care in.pdf} +} + +@online{masterhowtolearnDemonstrationMyWorkflow2018, + title = {Demonstration: {{My Workflow}} of {{Incremental Reading}}}, + shorttitle = {Demonstration}, + author = {{Master How To Learn}}, + date = {2018-12-09}, + url = {https://www.masterhowtolearn.com/2018-12-09-demonstration-my-workflow-of-incremental-reading/}, + urldate = {2020-05-19}, + abstract = {In my previous The Significance of Incremental Reading in SuperMemo: Part I and Part II, I tried my best to explain Incremental Reading. In this article, I will…}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/JZQCTRWN/2018-12-09-demonstration-my-workflow-of-incremental-reading.html} +} + +@online{matherPopulationBulletin2015, + title = {Population {{Bulletin}}}, + author = {Mather, Mark and Jacobsen, Linda A and Pollard, Kelvin}, + date = {2015}, + langid = {english}, + organization = {{Population Reference Bureau}}, + file = {/home/src/Offline/Papers/mather et al_2015_population bulletin.pdf} +} + +@article{maupinFruitAccordsHealthcare2009, + title = {‘{{Fruit}} of the Accords’: {{Healthcare}} Reform and Civil Participation in {{Highland Guatemala}}}, + shorttitle = {‘{{Fruit}} of the Accords’}, + author = {Maupin, Jonathan Nathaniel}, + date = {2009-04}, + journaltitle = {Social Science \& Medicine}, + shortjournal = {Social Science \& Medicine}, + volume = {68}, + number = {8}, + pages = {1456--1463}, + issn = {02779536}, + doi = {10.1016/j.socscimed.2009.01.045}, + abstract = {Governmental-contracting of non-governmental organizations (NGOs) is a central strategy of neoliberal health reforms in Central America. More than improving the equity, efficiency, and quality of health services, contracting presents a potential mechanism to redefine antagonistic relationships between the state and civil society, particularly in countries ravaged by political violence. In this paper I examine the process of heath reform in Guatemala through the implementation of the Sistema Integral de Atencio´n en Salud (SIAS) in the municipality of San Martı´n Jilotepeque. Mandated in the 1996 Peace Accords, SIAS potentially facilitates decentralization and civil participation through governmental-contracting of NGOs to provide health services to underserved populations. Drawing on ethnographic interviews with NGO representatives, Ministry of Health (MOH) workers, and community health workers and midwives, I examine the contracting process and then address issues of equity, efficiency, and quality of services, as well as the process of decentralization. I argue that contracted NGOs are largely restricted to serve as administrators, removed from the delivery of services, and are heavily dependent upon the traditional MOH structure, which limits the ability of SIAS to improve health services or foster the processes of decentralization and democratization.}, + langid = {english}, + file = {/home/src/Offline/Papers/maupin_2009_‘fruit of the accords’.pdf} +} + +@article{maupinRemakingGuatemalanMidwife2008, + title = {Remaking the {{Guatemalan Midwife}}: {{Health Care Reform}} and {{Midwifery Training Programs}} in {{Highland Guatemala}}}, + shorttitle = {Remaking the {{Guatemalan Midwife}}}, + author = {Maupin, Jonathan N.}, + date = {2008-10-28}, + journaltitle = {Medical Anthropology}, + shortjournal = {Medical Anthropology}, + volume = {27}, + number = {4}, + pages = {353--382}, + issn = {0145-9740, 1545-5882}, + doi = {10.1080/01459740802427679}, + langid = {english}, + file = {/home/src/Offline/Papers/maupin_2008_remaking the guatemalan midwife.pdf} +} + +@thesis{mayhewMultirateSensorFusion1999, + title = {Multi-Rate {{Sensor Fusion}} for {{GPS Navigation Using Kalman Filter}}}, + author = {Mayhew, David M}, + date = {1999-05}, + institution = {{Virginia Polytechnic Institute and State University}}, + langid = {english}, + file = {/home/src/Offline/Papers/mayhew_1999_multi-rate sensor fusion for gps navigation using kalman filter.pdf} +} + +@article{mccabe2008seeing, + title = {Seeing Is Believing: {{The}} Effect of Brain Images on Judgments of Scientific Reasoning}, + author = {McCabe, David P and Castel, Alan D}, + date = {2008}, + journaltitle = {Cognition}, + volume = {107}, + number = {1}, + pages = {343--352}, + publisher = {{Elsevier}} +} + +@article{mcdaniel2011test, + title = {Test-Enhanced Learning in a Middle School Science Classroom: {{The}} Effects of Quiz Frequency and Placement.}, + author = {McDaniel, Mark A and Agarwal, Pooja K and Huelser, Barbie J and McDermott, Kathleen B and Roediger III, Henry L}, + date = {2011}, + journaltitle = {Journal of Educational Psychology}, + shortjournal = {J. Educ. Psychol.}, + volume = {103}, + number = {2}, + pages = {399}, + publisher = {{American Psychological Association}} +} + +@article{mcewen1998protective, + title = {Protective and Damaging Effects of Stress Mediators}, + author = {McEwen, Bruce S}, + date = {1998}, + journaltitle = {New England journal of medicine}, + shortjournal = {N. Engl. J. Med.}, + volume = {338}, + number = {3}, + pages = {171--179}, + publisher = {{Mass Medical Soc}} +} + +@article{mcewenStressedStressedOut2005, + title = {Stressed or Stressed out: {{What}} Is the Difference?}, + shorttitle = {Stressed or Stressed Out}, + author = {McEwen, Bruce S.}, + date = {2005-09}, + journaltitle = {Journal of Psychiatry and Neuroscience}, + shortjournal = {J Psychiatry Neurosci}, + volume = {30}, + number = {5}, + eprint = {16151535}, + eprinttype = {pmid}, + pages = {315--318}, + issn = {1180-4882}, + url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1197275/}, + urldate = {2020-05-04}, + abstract = {The term “allostasis” has been coined to clarify ambiguities associated with the word “stress.” Allostasis refers to the adaptive processes that maintain homeostasis through the production of mediators such as adrenalin, cortisol and other chemical messengers. These mediators of the stress response promote adaptation in the aftermath of acute stress, but they also contribute to allostatic overload, the wear and tear on the body and brain that result from being “stressed out.” This conceptual framework has created a need to know how to improve the efficiency of the adaptive response to stressors while minimizing overactivity of the same systems, since such overactivity results in many of the common diseases of modern life. This framework has also helped to demystify the biology of stress by emphasizing the protective as well as the damaging effects of the body's attempts to cope with the challenges known as stressors.}, + pmcid = {PMC1197275}, + file = {/home/src/Offline/Papers/mcewen_2005_stressed or stressed out.pdf} +} + +@article{mcgeoch1942psychology, + title = {The Psychology of Human Learning.}, + author = {McGeoch, John Alexander}, + date = {1942}, + publisher = {{Longmans, Green}} +} + +@misc{mcluhanUnderstandingMediaExtensions1994, + title = {Understanding {{Media}} the {{Extensions}} of {{Man}}}, + author = {McLuhan, Marshall}, + date = {1994-10}, + publisher = {{London and New York}}, + file = {/home/src/Papers/mcluhan_1994_understanding media the extensions of man2.pdf} +} + +@article{mcmanus2019prevalence, + title = {Prevalence of Non-Suicidal Self-Harm and Service Contact in {{England}}, 2000–14: Repeated Cross-Sectional Surveys of the General Population}, + author = {McManus, Sally and Gunnell, David and Cooper, Claudia and Bebbington, Paul E and Howard, Louise M and Brugha, Traolach and Jenkins, Rachel and Hassiotis, Angela and Weich, Scott and Appleby, Louis}, + date = {2019}, + journaltitle = {The lancet psychiatry}, + shortjournal = {Lancet Psychiatry}, + volume = {6}, + number = {7}, + pages = {573--581}, + publisher = {{Elsevier}} +} + +@patent{mcnultyAssetTrackingError2013, + type = {patentus}, + title = {Asset Tracking with Error Adaptive Boundary}, + author = {McNulty, John E. and Jones, Gregory M.}, + holder = {{Gemalto SA}}, + date = {2013-02-19}, + number = {8378815B1}, + url = {https://patents.google.com/patent/US8378815B1/en}, + urldate = {2020-04-21}, + keywords = {central station,operable,position,site,tracking}, + file = {/home/src/Offline/Papers/mcnulty_jones_2013_asset tracking with error adaptive boundary.pdf} +} + +@article{mearaGlobalSurgery20302015, + title = {Global {{Surgery}} 2030: Evidence and Solutions for Achieving Health, Welfare, and Economic Development}, + shorttitle = {Global {{Surgery}} 2030}, + author = {Meara, John G and Leather, Andrew J M and Hagander, Lars and Alkire, Blake C and Alonso, Nivaldo and Ameh, Emmanuel A and Bickler, Stephen W and Conteh, Lesong and Dare, Anna J and Davies, Justine and Mérisier, Eunice Dérivois and El-Halabi, Shenaaz and Farmer, Paul E and Gawande, Atul and Gillies, Rowan and Greenberg, Sarah L M and Grimes, Caris E and Gruen, Russell L and Ismail, Edna Adan and Kamara, Thaim Buya and Lavy, Chris and Lundeg, Ganbold and Mkandawire, Nyengo C and Raykar, Nakul P and Riesel, Johanna N and Rodas, Edgar and Rose, John and Roy, Nobhojit and Shrime, Mark G and Sullivan, Richard and Verguet, Stéphane and Watters, David and Weiser, Thomas G and Wilson, Iain H and Yamey, Gavin and Yip, Winnie}, + date = {2015-08}, + journaltitle = {The Lancet}, + shortjournal = {The Lancet}, + volume = {386}, + number = {9993}, + pages = {569--624}, + issn = {01406736}, + doi = {10.1016/S0140-6736(15)60160-X}, + langid = {english}, + file = {/home/src/Offline/Papers/meara et al_2015_global surgery 2030.pdf} +} + +@online{MedicareClaimsSynthetic, + title = {Medicare {{Claims Synthetic Public Use Files}} ({{SynPUFs}}) | {{CMS}}}, + url = {https://www.cms.gov/Research-Statistics-Data-and-Systems/Downloadable-Public-Use-Files/SynPUFs}, + urldate = {2021-08-13} +} + +@article{meltzer2017role, + title = {The Role of the Immune System in Autism Spectrum Disorder}, + author = {Meltzer, Amory and Van de Water, Judy}, + date = {2017}, + journaltitle = {Neuropsychopharmacology}, + volume = {42}, + number = {1}, + pages = {284--298}, + publisher = {{Nature Publishing Group}} +} + +@article{mendez1992development, + title = {Development of Scoring Criteria for the Clock Drawing Task in {{Alzheimer}}'s Disease}, + author = {Mendez, Mario F and Ala, Thomas and Underwood, Kara L}, + date = {1992}, + journaltitle = {Journal of the American Geriatrics Society}, + shortjournal = {J. Am. Geriatr. Soc.}, + volume = {40}, + number = {11}, + pages = {1095--1099}, + publisher = {{Wiley Online Library}}, + keywords = {\#nosource} +} + +@report{merritthawkinsPhysicianAppointmentWait2014, + title = {Physician {{Appointment Wait Times}} and {{Medicaid}} and {{Medicare Acceptance Rates}}}, + author = {{Merritt Hawkins}}, + date = {2014}, + pages = {32}, + location = {{Merritt Hawkins}}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/M73U22AW/Hawkins - Physician Appointment Wait Times and Medicaid and .pdf} +} + +@book{merton2011travels, + title = {The Travels and Adventures of Serendipity: {{A}} Study in Sociological Semantics and the Sociology of Science}, + author = {Merton, Robert K and Barber, Elinor}, + date = {2011}, + publisher = {{Princeton University Press}} +} + +@article{meuret2011unexpected, + title = {Do Unexpected Panic Attacks Occur Spontaneously?}, + author = {Meuret, Alicia E and Rosenfield, David and Wilhelm, Frank H and Zhou, Enlu and Conrad, Ansgar and Ritz, Thomas and Roth, Walton T}, + date = {2011}, + journaltitle = {Biological psychiatry}, + shortjournal = {Biol. Psychiatry}, + volume = {70}, + number = {10}, + pages = {985--991}, + publisher = {{Elsevier}} +} + +@article{meyer2015household, + title = {Household Surveys in Crisis}, + author = {Meyer, Bruce D and Mok, Wallace KC and Sullivan, James X}, + date = {2015}, + journaltitle = {Journal of Economic Perspectives}, + shortjournal = {J. Econ. Perspect.}, + volume = {29}, + number = {4}, + pages = {199--226} +} + +@video{michaelpennIndexedSets2020, + title = {Indexed {{Sets}}}, + editor = {{Michael Penn}}, + date = {2020-11-27}, + url = {https://www.youtube.com/watch?v=ZoR93jR9Ok0}, + urldate = {2022-10-01}, + editortype = {director} +} + +@article{middleton2014dynamic, + title = {Dynamic Duos: {{On}} Partnership and the Possibilities of Postcolonial Ethnography}, + author = {Middleton, Townsend and Pradhan, Eklavya}, + date = {2014}, + journaltitle = {Ethnography}, + volume = {15}, + number = {3}, + pages = {355--374}, + publisher = {{Sage Publications Sage UK: London, England}} +} + +@online{milchiorHowUseAnki2016, + title = {How {{I}} Use {{Anki}} to Learn Mathematics - {{LessWrong}}}, + author = {Milchior, Arthur}, + date = {2016-12-07}, + url = {https://www.lesswrong.com/posts/8ZugMc4E5959Xh86i/how-i-use-anki-to-learn-mathematics}, + urldate = {2023-01-09} +} + +@book{milewskiCategoryTheoryProgrammers2019, + title = {Category {{Theory}} for {{Programmers}}}, + author = {Milewski, Bartosz}, + date = {2019-08-12}, + edition = {Version v1.3.0-0-g6bb0bc0}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Milewski_Category Theory for Programmers.pdf} +} + +@article{miller1956magical, + title = {The Magical Number Seven, plus or Minus Two: {{Some}} Limits on Our Capacity for Processing Information.}, + author = {Miller, George A}, + date = {1956}, + journaltitle = {Psychological review}, + shortjournal = {Psychol. Rev.}, + volume = {63}, + number = {2}, + pages = {81}, + publisher = {{American Psychological Association}} +} + +@article{miller2001integrative, + title = {An Integrative Theory of Prefrontal Cortex Function}, + author = {Miller, Earl K and Cohen, Jonathan D}, + date = {2001}, + journaltitle = {Annual review of neuroscience}, + shortjournal = {Annu. Rev. Neurosci.}, + volume = {24}, + number = {1}, + pages = {167--202}, + publisher = {{Annual Reviews 4139 El Camino Way, PO Box 10139, Palo Alto, CA 94303-0139, USA}} +} + +@book{millerDeathSalesman1998, + title = {Death of a {{Salesman}}}, + author = {Miller, Arthur}, + date = {1998}, + publisher = {{Penguin Books}}, + langid = {english}, + file = {/home/src/Papers/miller_death of a salesman.pdf} +} + +@article{mills2007white, + title = {White Ignorance}, + author = {Mills, Charles}, + date = {2007}, + journaltitle = {Race and epistemologies of ignorance}, + shortjournal = {Race Epistemol. Ignorance}, + volume = {247}, + pages = {26--31}, + publisher = {{State University of New York Press Albany}} +} + +@article{millsSupportingIndividualsIntellectual2020, + title = {Supporting Individuals with Intellectual and Developmental Disability during the First 100 Days of the {{COVID}}‐19 Outbreak in the {{USA}}}, + author = {Mills, W. R. and Sender, S. and Lichtefeld, J. and Romano, N. and Reynolds, K. and Price, M. and Phipps, J. and White, L. and Howard, S. and Poltavski, D. and Barnes, R.}, + date = {2020-07}, + journaltitle = {Journal of Intellectual Disability Research}, + shortjournal = {Journal of Intellectual Disability Research}, + volume = {64}, + number = {7}, + pages = {489--496}, + issn = {0964-2633, 1365-2788}, + doi = {10.1111/jir.12740}, + langid = {english}, + file = {/home/src/Papers/mills et al_2020_supporting individuals with intellectual and developmental disability during.pdf} +} + +@article{miranda2008mental, + title = {Mental Health in the Context of Health Disparities}, + author = {Miranda, Jeanne and McGuire, Thomas G and Williams, David R and Wang, Philip}, + date = {2008}, + journaltitle = {american Journal of Psychiatry}, + shortjournal = {Am. J. Psychiatry}, + volume = {165}, + number = {9}, + pages = {1102--1108}, + publisher = {{Am Psychiatric Assoc}} +} + +@article{mirov2016multipurpose, + title = {Multipurpose Wearable Electrical Contact}, + author = {Mirov, Russell Norman and Lapetina, John}, + date = {2016-03-29}, + publisher = {{Google Patents}} +} + +@article{mirov2017multipurpose, + title = {Multipurpose Contacts for Delivering Electro-Haptic Feedback to a Wearer}, + author = {Mirov, Russell Norman and Lapetina, John}, + date = {2017-11-28}, + publisher = {{Google Patents}} +} + +@article{miskellyElectronicTrackingPatients2005, + title = {Electronic Tracking of Patients with Dementia and Wandering Using Mobile Phone Technology}, + author = {Miskelly, Frank}, + date = {2005-09-01}, + journaltitle = {Age and Ageing}, + shortjournal = {Age Ageing}, + volume = {34}, + number = {5}, + pages = {497--499}, + issn = {1468-2834, 0002-0729}, + doi = {10.1093/ageing/afi145}, + langid = {english}, + file = {/home/src/Offline/Papers/miskelly_2005_electronic tracking of patients with dementia and wandering using mobile phone.pdf} +} + +@article{mitchellNeverendingLearning2018, + title = {Never-Ending Learning}, + author = {Mitchell, T. and Kisiel, B. and Krishnamurthy, J. and Lao, N. and Mazaitis, K. and Mohamed, T. and Nakashole, N. and Platanios, E. and Ritter, A. and Samadi, M. and Settles, B. and Cohen, W. and Wang, R. and Wijaya, D. and Gupta, A. and Chen, X. and Saparov, A. and Greaves, M. and Welling, J. and Hruschka, E. and Talukdar, P. and Yang, B. and Betteridge, J. and Carlson, A. and Dalvi, B. and Gardner, M.}, + date = {2018-04-24}, + journaltitle = {Communications of the ACM}, + shortjournal = {Commun. ACM}, + volume = {61}, + number = {5}, + pages = {103--115}, + issn = {00010782}, + doi = {10.1145/3191513}, + abstract = {Whereas people learn many different types of knowledge from diverse experiences over many years, and become ­better learners over time, most current machine learning systems are much more narrow, learning just a single function or data model based on statistical analysis of a single data set. We suggest that people learn better than computers precisely because of this difference, and we suggest a key direction for machine learning research is to develop software architectures that enable intelligent agents to also learn many types of knowledge, continuously over many years, and to become better learners over time. In this paper we define more precisely this never-ending learning paradigm for machine learning, and we present one case study: the Never-Ending Language Learner (NELL), which achieves a number of the desired properties of a never-ending learner. NELL has been learning to read the Web 24hrs/ day since January 2010, and so far has acquired a knowledge base with 120mn diverse, confidence-weighted beliefs (e.g., servedWith(tea,biscuits)), while learning thousands of interrelated functions that continually improve its reading competence over time. NELL has also learned to reason over its knowledge base to infer new beliefs it has not yet read from those it has, and NELL is inventing new relational predicates to extend the ontology it uses to represent beliefs. We describe the design of NELL, experimental results illustrating its behavior, and discuss both its successes and shortcomings as a case study in never-ending learning. NELL can be tracked online at http://rtw.ml.cmu.edu, and followed on Twitter at @CMUNELL.}, + langid = {english}, + file = {/home/src/Offline/Papers/mitchell et al_2018_never-ending learning.pdf} +} + +@article{mitchison1999can, + title = {Can {{Hebbian}} Volume Learning Explain Discontinuities in Cortical Maps?}, + author = {Mitchison, Graeme J and Swindale, Nicholas V}, + date = {1999}, + journaltitle = {Neural computation}, + shortjournal = {Neural Comput.}, + volume = {11}, + number = {7}, + pages = {1519--1526}, + publisher = {{MIT Press}} +} + +@article{moher2009preferred, + title = {Preferred Reporting Items for Systematic Reviews and Meta-Analyses: The {{PRISMA}} Statement}, + author = {Moher, David and Liberati, Alessandro and Tetzlaff, Jennifer and Altman, Douglas G and Group, Prisma and others}, + date = {2009}, + journaltitle = {PLoS med}, + volume = {6}, + number = {7}, + pages = {e1000097}, + publisher = {{Public Library of Science}} +} + +@article{mohl2014non, + title = {Non-Suicidal Self-Injury and Indirect Self-Harm among {{Danish}} High School Students}, + author = {Møhl, Bo and La Cour, Peter and Skandsen, Annika}, + date = {2014}, + journaltitle = {Scandinavian Journal of Child and Adolescent Psychiatry and Psychology}, + shortjournal = {Scand. J. Child Adolesc. Psychiatry Psychol.}, + volume = {2}, + number = {1}, + pages = {11--18} +} + +@article{monsch1992comparisons, + title = {Comparisons of Verbal Fluency Tasks in the Detection of Dementia of the {{Alzheimer}} Type}, + author = {Monsch, Andreas U and Bondi, Mark W and Butters, Nelson and Salmon, David P and Katzman, Robert and Thal, Leon J}, + date = {1992}, + journaltitle = {Archives of neurology}, + shortjournal = {Arch. Neurol.}, + volume = {49}, + number = {12}, + pages = {1253--1258}, + publisher = {{American Medical Association}}, + keywords = {\#nosource} +} + +@article{monteithBigDataBipolar2016, + title = {Big Data for Bipolar Disorder}, + author = {Monteith, Scott and Glenn, Tasha and Geddes, John and Whybrow, Peter C. and Bauer, Michael}, + date = {2016}, + journaltitle = {International journal of bipolar disorders}, + shortjournal = {Int. J. Bipolar Disord.}, + volume = {4}, + number = {1}, + pages = {1--18}, + publisher = {{Springer}}, + isbn = {2194-7511} +} + +@online{moodyWFDBProgrammerGuide2019, + title = {{{WFDB Programmer}}’s {{Guide}}}, + author = {Moody, George}, + date = {2019-03-08}, + url = {https://www.physionet.org/physiotools/wpg/wpg.pdf}, + urldate = {2020-03-17}, + file = {/home/src/Offline/Papers/moody_2019_wfdb programmer’s guide.pdf} +} + +@article{morelandTimingStateTerritorial2020, + title = {Timing of {{State}} and {{Territorial COVID-19 Stay-at-Home Orders}} and {{Changes}} in {{Population Movement}} — {{United States}}, {{March}} 1–{{May}} 31, 2020}, + author = {Moreland, Amanda and Herlihy, Christine and Tynan, Michael A. and Sunshine, Gregory and McCord, Russell F. and Hilton, Charity and Poovey, Jason and Werner, Angela K. and Jones, Christopher D. and Fulmer, Erika B. and Gundlapalli, Adi V. and Strosnider, Heather and Potvien, Aaron and García, Macarena C. and Honeycutt, Sally and Baldwin, Grant and {CDC Public Health Law Program} and {CDC COVID-19 Response Team, Mitigation Policy Analysis Unit} and {CDC Public Health Law Program} and Clodfelter, Catherine and Howard-Williams, Mara and Jeong, Gi and Landsman, Lisa and Shelburne, Julia and {CDC COVID-19 Response Team, Mitigation Policy Analysis Unit} and Brown, Amanda and Cramer, Ryan and Gilchrist, Siobhan and Hulkower, Rachel and Limeres, Alexa and Popoola, Adebola}, + date = {2020-09-04}, + journaltitle = {MMWR. Morbidity and Mortality Weekly Report}, + shortjournal = {MMWR Morb. Mortal. Wkly. Rep.}, + volume = {69}, + number = {35}, + pages = {1198--1203}, + issn = {0149-2195, 1545-861X}, + doi = {10.15585/mmwr.mm6935a2}, + abstract = {What is already known about this topic? Stay-at-home orders are a community mitigation strategy used to reduce the spread of COVID-19 in the United States. What is added by this report? States and territories that issued mandatory stay-at-home orders experienced decreased population movement in most counties. The period after the first state relaxed a stay-at-home order was associated with increased population movement in states or territories that had not relaxed a stay-at-home order in the same period. What are the implications for public health practice? Stay-at-home orders can reduce activities associated with community spread of COVID-19, including population movement and close person-to-person contact outside the household. These findings can inform future public policies to reduce community spread of COVID-19.}, + langid = {english}, + file = {/home/src/Papers/moreland et al_2020_timing of state and territorial covid-19 stay-at-home orders and changes in.pdf} +} + +@article{morganRevitalisingEvidenceBase2007, + title = {Revitalising the Evidence Base for Public Health: An Assets Model}, + author = {Morgan, Antony and Ziglio, Erio}, + date = {2007}, + journaltitle = {IUHPE Promotion \& Education}, + shortjournal = {IUHPE Promot. Educ.}, + file = {/home/jacob/Dropbox/Papers/Morgan and Ziglio - 2007 - Revitalising the evidence base for public health .pdf} +} + +@article{morris1993current, + title = {Current Vision and Scoring Rules the Clinical Dementia Rating ({{CDR}})}, + author = {Morris, JC}, + date = {1993}, + journaltitle = {Neurology}, + volume = {43}, + pages = {2412--14}, + keywords = {\#nosource} +} + +@inproceedings{morris2005embedded, + title = {Embedded Assessment: Overcoming Barriers to Early Detection with Pervasive Computing}, + booktitle = {International Conference on Pervasive Computing}, + author = {Morris, Margaret and Intille, Stephen S and Beaudin, Jennifer S}, + date = {2005}, + pages = {333--346}, + organization = {{Springer}}, + keywords = {\#nosource} +} + +@inproceedings{morrisCatalyzingSocialInteraction2004, + title = {Catalyzing Social Interaction with Ubiquitous Computing: A Needs Assessment of Elders Coping with Cognitive Decline}, + shorttitle = {Catalyzing Social Interaction with Ubiquitous Computing}, + booktitle = {Extended Abstracts of the 2004 Conference on {{Human}} Factors and Computing Systems - {{CHI}} '04}, + author = {Morris, Margaret and Lundell, Jay and Dishman, Eric}, + date = {2004}, + pages = {1151}, + publisher = {{ACM Press}}, + location = {{Vienna, Austria}}, + doi = {10.1145/985921.986011}, + abstract = {This paper describes design directions for ubiquitous computing to facilitate social interaction. The study focuses on elders coping with cognitive decline and their caregivers, but it is expected that the concepts will have much broader applicability. Social needs and barriers were examined in a qualitative study of 45 households across the U.S. Directions for ubiquitous computing concepts are outlined to address these social needs and barriers. Two example concepts, an ambient display to facilitate joint activity and a social memory aid, are described in detail. An underlying principal of these design directions and concepts is the use of computing technologies as catalysts rather than substitutes for human relationships. These concepts are part of an integrated system of home health technologies under development in a multiyear “aging in place” study.}, + eventtitle = {Extended Abstracts of the 2004 Conference}, + isbn = {978-1-58113-703-3}, + langid = {english}, + file = {/home/src/Offline/Papers/morris et al_2004_catalyzing social interaction with ubiquitous computing.pdf} +} + +@article{morrisMildCognitiveImpairment2006, + title = {Mild {{Cognitive Impairment Is Early-Stage Alzheimer Disease}}: {{Time}} to {{Revise Diagnostic Criteria}}}, + shorttitle = {Mild {{Cognitive Impairment Is Early-Stage Alzheimer Disease}}}, + author = {Morris, John C.}, + date = {2006-01-01}, + journaltitle = {Archives of Neurology}, + shortjournal = {Arch Neurol}, + volume = {63}, + number = {1}, + pages = {15}, + issn = {0003-9942}, + doi = {10.1001/archneur.63.1.15}, + langid = {english}, + file = {/home/src/Offline/Papers/morris_2006_mild cognitive impairment is early-stage alzheimer disease.pdf} +} + +@article{morrowIdentifyingMappingCommunity1999, + title = {Identifying and Mapping Community Vulnerability}, + author = {Morrow, Betty Hearn}, + date = {1999}, + journaltitle = {Disasters}, + volume = {23}, + number = {1}, + pages = {1--18}, + publisher = {{Wiley Online Library}}, + isbn = {0361-3666} +} + +@article{mucci2006validity, + title = {Validity of Self-Reported Health Plan Information in a Population-Based Health Survey}, + author = {Mucci, Lorelei A and Wood, Phil A and Cohen, Bruce and Clements, Karen M and Brawarsky, Phyllis and Brooks, Daniel R}, + date = {2006}, + journaltitle = {Journal of Public Health Management and Practice}, + shortjournal = {J. Public Health Manag. Pract.}, + volume = {12}, + number = {6}, + pages = {570--577}, + publisher = {{LWW}} +} + +@article{muesUseMedicareDatabase2017, + title = {Use of the {{Medicare}} Database in Epidemiologic and Health Services Research: A Valuable Source of Real-World Evidence on the Older and Disabled Populations in the {{US}}}, + author = {Mues, Katherine E. and Liede, Alexander and Liu, Jiannong and Wetmore, James B. and Zaha, Rebecca and Bradbury, Brian D. and Collins, Allan J. and Gilbertson, David T.}, + date = {2017}, + journaltitle = {Clinical epidemiology}, + shortjournal = {Clin. Epidemiol.}, + volume = {9}, + pages = {267}, + publisher = {{Dove Press}} +} + +@article{mugecevikSARSCoV2TransmissionDynamics2020, + title = {{{SARS-CoV-2}} Transmission Dynamics Should Inform Policy}, + author = {{Muge Cevik} and {Julia L. Marcus} and {Caroline Buckee} and {Tara C Smith}}, + date = {2020}, + journaltitle = {SSRN Electronic Journal}, + shortjournal = {SSRN Electron. J.}, + file = {/home/src/Papers/muge cevik et al_2020_sars-cov-2 transmission dynamics should inform policy.pdf} +} + +@book{munznerVisualizationAnalysisDesign2014, + title = {Visualization {{Analysis}} and {{Design}}}, + author = {Munzner, Tamara}, + date = {2014-12-01}, + edition = {0}, + publisher = {{A K Peters/CRC Press}}, + doi = {10.1201/b17511}, + isbn = {978-0-429-08890-2}, + langid = {english}, + file = {/home/src/Offline/Papers/munzner_2014_visualization analysis and design.pdf} +} + +@article{murre2007modeling, + title = {Modeling Amnesia: Connectionist and Mathematical Approaches}, + author = {Murre, Jaap MJ and Meeter, Martijn and Chessa, Antonio G}, + date = {2007}, + journaltitle = {Statistical and process models for neuroscience and aging}, + shortjournal = {Stat. Process Models Neurosci. Aging}, + pages = {119--162}, + publisher = {{Lawrence Erlbaum Mahwah, NJ}} +} + +@article{murre2013mathematical, + title = {A Mathematical Model of Forgetting and Amnesia}, + author = {Murre, Jaap MJ and Chessa, Antonio G and Meeter, Martijn}, + date = {2013}, + journaltitle = {Frontiers in psychology}, + shortjournal = {Front. Psychol.}, + volume = {4}, + pages = {76}, + publisher = {{Frontiers}} +} + +@article{murreReplicationAnalysisEbbinghaus2015, + title = {Replication and {{Analysis}} of {{Ebbinghaus}}’ {{Forgetting Curve}}}, + author = {Murre, Jaap M. J. and Dros, Joeri}, + editor = {Chialvo, Dante R.}, + date = {2015-07-06}, + journaltitle = {PLOS ONE}, + shortjournal = {PLoS ONE}, + volume = {10}, + number = {7}, + pages = {e0120644}, + issn = {1932-6203}, + doi = {10.1371/journal.pone.0120644}, + langid = {english}, + file = {/home/src/Papers/murre_dros_2015_replication and analysis of ebbinghaus’ forgetting curve.pdf} +} + +@article{mynatt2001developing, + title = {Developing Technology to Support the Functional Independence of Older Adults}, + author = {Mynatt, Elizabeth D and Rogers, Wendy A}, + date = {2001}, + journaltitle = {Ageing International}, + shortjournal = {Ageing Int.}, + volume = {27}, + number = {1}, + pages = {24--41}, + publisher = {{Springer}}, + keywords = {\#nosource} +} + +@article{nandeEffectEvictionMoratoria2021, + title = {The Effect of Eviction Moratoria on the Transmission of {{SARS-CoV-2}}}, + author = {Nande, Anjalika and Sheen, Justin and Walters, Emma L. and Klein, Brennan and Chinazzi, Matteo and Gheorghe, Andrei H. and Adlam, Ben and Shinnick, Julianna and Tejeda, Maria Florencia and Scarpino, Samuel V. and Vespignani, Alessandro and Greenlee, Andrew J. and Schneider, Daniel and Levy, Michael Z. and Hill, Alison L.}, + date = {2021-12}, + journaltitle = {Nature Communications}, + shortjournal = {Nat Commun}, + volume = {12}, + number = {1}, + pages = {2274}, + issn = {2041-1723}, + doi = {10.1038/s41467-021-22521-5}, + abstract = {Abstract Massive unemployment during the COVID-19 pandemic could result in an eviction crisis in US cities. Here we model the effect of evictions on SARS-CoV-2 epidemics, simulating viral transmission within and among households in a theoretical metropolitan area. We recreate a range of urban epidemic trajectories and project the course of the epidemic under two counterfactual scenarios, one in which a strict moratorium on evictions is in place and enforced, and another in which evictions are allowed to resume at baseline or increased rates. We find, across scenarios, that evictions lead to significant increases in infections. Applying our model to Philadelphia using locally-specific parameters shows that the increase is especially profound in models that consider realistically heterogenous cities in which both evictions and contacts occur more frequently in poorer neighborhoods. Our results provide a basis to assess eviction moratoria and show that policies to stem evictions are a warranted and important component of COVID-19 control.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/RSUP93CA/Nande et al_2021_The effect of eviction moratoria on the transmission of SARS-CoV-2.pdf} +} + +@online{NassimTalebWould, + title = {Nassim {{Taleb}} Would Love the {{Zettelkasten Method}}}, + url = {https://zettelkasten.de/posts/zettelkasten-antifragile/}, + urldate = {2020-03-17}, + file = {/home/cedarprince/Zotero/storage/FJR9B9RD/zettelkasten-antifragile.html} +} + +@book{national2010prevention, + title = {The Prevention and Treatment of Missing Data in Clinical Trials}, + author = {Council, National Research and others}, + date = {2010}, + publisher = {{National Academies Press}} +} + +@online{nationalinstitutesofhealthNationalInstituteMinority, + title = {National {{Institute}} on {{Minority Health}} and {{Health Disparities}}}, + author = {National Institutes of Health}, + url = {https://www.nimhd.nih.gov/}, + urldate = {2022-05-31}, + abstract = {NIMHD oversees several programs central to NIH's mission of uncovering new knowledge that will lead to better health for everyone.}, + langid = {english}, + organization = {{NIMHD}}, + file = {/home/cedarprince/Zotero/storage/PQZKRHHG/www.nimhd.nih.gov.html} +} + +@online{nationalinstitutesofhealthUNITE2021, + title = {{{UNITE}}}, + author = {{National Institutes of Health}}, + date = {2021-02-24T12:29:41-05:00}, + url = {https://www.nih.gov/ending-structural-racism/unite}, + urldate = {2022-05-31}, + abstract = {Learn about NIH’s efforts to identify and address racism and support equity and inclusion within its biomedical research community.}, + langid = {english}, + organization = {{National Institutes of Health (NIH)}}, + file = {/home/cedarprince/Zotero/storage/FXAJA9T8/unite.html} +} + +@article{navon1984resources, + title = {Resources—{{A}} Theoretical Soup Stone?}, + author = {Navon, David}, + date = {1984}, + journaltitle = {Psychological review}, + shortjournal = {Psychol. Rev.}, + volume = {91}, + number = {2}, + pages = {216}, + publisher = {{American Psychological Association}} +} + +@book{nelson1991national, + title = {National Adult Reading Test ({{NART}}).}, + author = {Nelson, Hazel E and Willison, Jonathan}, + date = {1991}, + publisher = {{Nfer-Nelson Windsor}}, + keywords = {\#nosource} +} + +@article{nestsiarovichUsingMachineLearning2021, + title = {Using {{Machine Learning Imputed Outcomes}} to {{Assess Drug-Dependent Risk}} of {{Self-Harm}} in {{Patients}} with {{Bipolar Disorder}}: {{A Comparative Effectiveness Study}}}, + shorttitle = {Using {{Machine Learning Imputed Outcomes}} to {{Assess Drug-Dependent Risk}} of {{Self-Harm}} in {{Patients}} with {{Bipolar Disorder}}}, + author = {Nestsiarovich, Anastasiya and Kumar, Praveen and Lauve, Nicolas Raymond and Hurwitz, Nathaniel G and Mazurie, Aurélien J and Cannon, Daniel C and Zhu, Yiliang and Nelson, Stuart James and Crisanti, Annette S and Kerner, Berit and Tohen, Mauricio and Perkins, Douglas J and Lambert, Christophe Gerard}, + date = {2021-04-21}, + journaltitle = {JMIR Mental Health}, + shortjournal = {JMIR Ment Health}, + volume = {8}, + number = {4}, + pages = {e24522}, + issn = {2368-7959}, + doi = {10.2196/24522}, + abstract = {Background: Incomplete suicidality coding in administrative claims data is a known obstacle for observational studies. With most of the negative outcomes missing from the data, it is challenging to assess the evidence on treatment strategies for the prevention of self-harm in bipolar disorder (BD), including pharmacotherapy and psychotherapy. There are conflicting data from studies on the drug-dependent risk of self-harm, and there is major uncertainty regarding the preventive effect of monotherapy and drug combinations.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Nestsiarovich et al_2021_Using Machine Learning Imputed Outcomes to Assess Drug-Dependent Risk of.pdf} +} + +@online{Neumitra, + title = {Neumitra}, + url = {https://netscientific.net/portfolios/neumitra/}, + urldate = {2020-02-11}, + langid = {american}, + organization = {{NetScientific}}, + file = {/home/cedarprince/Zotero/storage/FPSKRDW5/neumitra.html} +} + +@report{newyorkstatedepartmentofhealthFactorsAssociatedNursing2020, + title = {Factors {{Associated}} with {{Nursing Home Infections}} and {{Fatalities}} in {{New York State During}} the {{COVID-19 Global Health Crisis}}}, + author = {{New York State Department of Health}}, + date = {2020-07-20}, + institution = {{New York State Department of Health}} +} + +@online{nielsenUsingSpacedRepetition2019, + title = {Using Spaced Repetition Systems to See through a Piece of Mathematics}, + author = {Nielsen, Michael}, + date = {2019}, + url = {http://cognitivemedium.com/srs-mathematics} +} + +@online{NIHCommonData, + title = {{{NIH Common Data Elements}} ({{CDE}}) {{Repository}}}, + url = {https://cde.nlm.nih.gov/home}, + urldate = {2020-12-30} +} + +@article{nock2010self, + title = {Self-Injury}, + author = {Nock, Matthew K}, + date = {2010}, + journaltitle = {Annual review of clinical psychology}, + shortjournal = {Annu. Rev. Clin. Psychol.}, + volume = {6}, + pages = {339--363}, + publisher = {{Annual Reviews}} +} + +@article{nock2010self, + title = {Self-Injury}, + author = {Nock, Matthew K}, + date = {2010}, + journaltitle = {Annual review of clinical psychology}, + shortjournal = {Annu. Rev. Clin. Psychol.}, + volume = {6}, + pages = {339--363}, + publisher = {{Annual Reviews}} +} + +@book{norris2001digital, + title = {Digital Divide: {{Civic}} Engagement, Information Poverty, and the {{Internet}} Worldwide}, + author = {Norris, Pippa and others}, + date = {2001}, + publisher = {{Cambridge university press}} +} + +@article{nouriComparisonOptimizationBiological2015, + title = {Comparison and Optimization of Biological and Antibacterial Activity of Indian White Shrimp Waste Extracted by Biosynthesis Methods through Response Surface Methodology}, + author = {Nouri, M. and Khodaiyan, F. and Razavi, H. and Mousavi, M.A.}, + date = {2015}, + journaltitle = {Journal of Pure and Applied Microbiology}, + shortjournal = {J. Pure Appl. Microbiol.}, + volume = {9}, + number = {3}, + pages = {357--365}, + keywords = {\#nosource} +} + +@article{nouriImprovementChitosanProduction, + title = {Improvement of Chitosan Production from {{Persian Gulf}} Shrimp Waste by Response Surface Methodology}, + author = {Nouri, Marjan and Khodaiyan, Faramarz and Razavi, Seyed Hadi and Mousavi, Mohammad}, + journaltitle = {Food Hydrocolloids}, + shortjournal = {Food Hydrocolloids}, + issn = {0268-005X}, + doi = {10.1016/j.foodhyd.2015.08.027}, + keywords = {\#nosource,Chitosan,Degree of deacetylation,Molecular weight,Response surface methodology (RSM)} +} + +@article{o2004reduced, + title = {Reduced Electrodermal Response to Errors Predicts Poor Sustained Attention Performance in Attention Deficit Hyperactivity Disorder}, + author = {O'Connell, Redmond G and Bellgrove, Mark A and Dockree, Paul M and Robertson, Ian H}, + date = {2004}, + journaltitle = {Neuroreport}, + volume = {15}, + number = {16}, + pages = {2535--2538}, + publisher = {{LWW}} +} + +@book{o2016weapons, + title = {Weapons of Math Destruction: {{How}} Big Data Increases Inequality and Threatens Democracy}, + author = {O'neil, Cathy}, + date = {2016}, + publisher = {{Broadway Books}} +} + +@article{obermeyerDissectingRacialBias2019, + title = {Dissecting Racial Bias in an Algorithm Used to Manage the Health of Populations}, + author = {Obermeyer, Ziad and Powers, Brian and Vogeli, Christine and Mullainathan, Sendhil}, + date = {2019}, + pages = {8}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/KQ7QIKF8/Obermeyer et al_2019_Dissecting racial bias in an algorithm used to manage the health of populations.pdf} +} + +@book{observationalhealthdatasciencesandinformaticscollaborativeBookOHDSI2021, + title = {The {{Book}} of {{OHDSI}}}, + author = {{Observational Health Data Sciences and Informatics Collaborative}}, + date = {2021}, + publisher = {{OHDSI}}, + url = {https://ohdsi.github.io/TheBookOfOhdsi/}, + file = {/home/src/Papers/observational health data sciences and informatics collaborative_2021_the book of ohdsi.pdf} +} + +@incollection{observationalhealthdatasciencesandinformaticscollaborativeChapter19Study2021, + title = {Chapter 19 {{Study Steps}}}, + booktitle = {The {{Book}} of {{OHDSI}}}, + author = {{Observational Health Data Sciences and Informatics Collaborative}}, + date = {2021}, + url = {https://ohdsi.github.io/TheBookOfOhdsi/StudySteps.html}, + urldate = {2021-05-20} +} + +@incollection{observationalhealthdatasciencesandinformaticscollaborativeChapterCommonData2021, + title = {Chapter 4 {{The Common Data Model}}}, + booktitle = {The {{Book}} of {{OHDSI}}}, + author = {{Observational Health Data Sciences and Informatics Collaborative}}, + date = {2021}, + url = {https://ohdsi.github.io/TheBookOfOhdsi/CommonDataModel.html#fn20}, + urldate = {2021-05-20} +} + +@article{oclooPhysicochemicalFunctionalCharacteristics2011, + title = {Physicochemical and Functional Characteristics of Radiation-Processed Shrimp Chitosan}, + author = {Ocloo, F.C.K. and Quayson, E.T. and Adu-Gyamfi, A. and Quarcoo, E.A. and Asare, D. and Serfor-Armah, Y. and Woode, B.K.}, + year = {2011/1/1/2011///}, + journaltitle = {Radiation Physics and Chemistry}, + shortjournal = {Radiation Physics and Chemistry}, + volume = {80}, + pages = {837--841}, + issn = {0969-806X}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0969806X11000971&site=eds-live&scope=site}, + abstract = {The effects of gamma irradiation on chitosan samples were determined in terms of physicochemical and functional properties. Shrimp chitosan was extracted from shell using a chemical process involving demineralization, deproteinization, decolorization and deacetylation. Commercial snow chitosan was also used. Samples (in a solid state) were given irradiation dose of 25kGy at a dose rate of 1.1013kGy/h in air and 0kGy samples were used as controls. Results showed that moisture contents were between 8.690\% and 13.645\%. There were no significant differences (P{$>$}0.05) in the degree of deacetylation of the chitosan samples. Significant differences (P{$<$}0.05) were observed in the viscosity and viscosity-average molecular weight of the chistosan samples. Viscosity and molecular weight decreased when the samples were given the irradiation dose of 25kGy. Chitosan samples had low antioxidant activity compared with BHT. Water binding capacity ranged from 582.40\% to 656.75\% and fat binding capacity was between 431.00\% and 560.55\%. Irradiation had a major effect on the viscosity and the viscosity-average molecular weight of the chitosan samples.}, + keywords = {\#nosource} +} + +@online{officeforpeoplewithdevelopmentaldisabilitiesRevisedStaffingGuidance2020, + title = {Revised {{Staffing Guidance}} for {{Management}} of {{COVID-19}}}, + author = {{Office for People with Developmental Disabilities}}, + date = {2020-06-12}, + url = {https://opwdd.ny.gov/system/files/documents/2020/06/6.12.2020-opwdd_covid19_staffguidance_updated-symptoms.pdf}, + urldate = {2020-07-14}, + file = {/home/cedarprince/Zotero/storage/CUFXUEF4/6.12.2020-opwdd_covid19_staffguidance_updated-symptoms.pdf} +} + +@article{officeofinspectorgeneralInaccuraciesMedicareRace2022, + title = {Inaccuracies in {{Medicare}}'s {{Race}} and {{Ethnicity Data Hinder}} the {{Ability To Assess Health Disparities}}}, + author = {{Office of Inspector General}}, + date = {2022-06}, + pages = {24}, + langid = {english}, + keywords = {_tablet_modified}, + file = {/Users/jzelko3/Knowledgebase/Papers/Office of Inspector General_2022_Inaccuracies in Medicare's Race and Ethnicity Data Hinder the Ability To Assess.pdf} +} + +@online{oklobdzijaDidDisplacementPlay2021, + title = {Did {{Displacement Play}} a {{Role}} in {{California}}'s {{COVID-19 Surge}}?}, + author = {Oklobdzija, Stan}, + date = {2021-02-16T21:56:45+00:00}, + url = {https://cayimby.org/did-displacement-play-a-role-in-californias-covid-19-surge/}, + urldate = {2021-02-17}, + abstract = {For the past two months, Southern California was America’s COVID-19 epicenter. Throughout the month of January, someone in Los Angeles County died every six minutes~from …}, + langid = {english}, + organization = {{California YIMBY}}, + file = {/home/jzelko3@icl.gtri.org/Knowledgebase/Papers/oklobdzija_2021_did displacement play a role in california's covid-19 surge.pdf} +} + +@article{olszewskiNeueWegeZur1929, + title = {Neue {{Wege}} Zur {{Wassersterilisierung}} ({{Katadyn}}). {{Von Dr}}. {{Georg A}}. {{Krause}}, {{München}}. 20 {{Seiten}}, Mit 2 {{Abb}}. Und 5 {{Tabellen}}. {{Verlag}} von {{J}}. {{F}}. {{Bergmann}}, {{München}} 1928. {{Preis RM}}. 1,20}, + author = {Olszewski, W.}, + date = {1929}, + journaltitle = {Angewandte Chemie}, + shortjournal = {Angew. Chem.}, + volume = {42}, + number = {21}, + pages = {559--559}, + issn = {1521-3757}, + doi = {10.1002/ange.19290422118}, + keywords = {\#nosource} +} + +@article{onbehalfoftheedgecopdteamDigitalHealthSystem2017, + title = {Digital Health System for Personalised {{COPD}} Long-Term Management}, + author = {{on behalf of the EDGE COPD Team} and Velardo, Carmelo and Shah, Syed Ahmar and Gibson, Oliver and Clifford, Gari and Heneghan, Carl and Rutter, Heather and Farmer, Andrew and Tarassenko, Lionel}, + date = {2017-12}, + journaltitle = {BMC Medical Informatics and Decision Making}, + shortjournal = {BMC Med Inform Decis Mak}, + volume = {17}, + number = {1}, + pages = {19}, + issn = {1472-6947}, + doi = {10.1186/s12911-017-0414-8}, + abstract = {Background: Recent telehealth studies have demonstrated minor impact on patients affected by long-term conditions. The use of technology does not guarantee the compliance required for sustained collection of high-quality symptom and physiological data. Remote monitoring alone is not sufficient for successful disease management. A patient-centred design approach is needed in order to allow the personalisation of interventions and encourage the completion of daily self-management tasks. Methods: A digital health system was designed to support patients suffering from chronic obstructive pulmonary disease in self-managing their condition. The system includes a mobile application running on a consumer tablet personal computer and a secure backend server accessible to the health professionals in charge of patient management. The patient daily routine included the completion of an adaptive, electronic symptom diary on the tablet, and the measurement of oxygen saturation via a wireless pulse oximeter. Results: The design of the system was based on a patient-centred design approach, informed by patient workshops. One hundred and ten patients in the intervention arm of a randomised controlled trial were subsequently given the tablet computer and pulse oximeter for a 12-month period. Patients were encouraged, but not mandated, to use the digital health system daily. The average used was 6.0 times a week by all those who participated in the full trial. Three months after enrolment, patients were able to complete their symptom diary and oxygen saturation measurement in less than 1 m 40s (96\% of symptom diaries). Custom algorithms, based on the self-monitoring data collected during the first 50 days of use, were developed to personalise alert thresholds. Conclusions: Strategies and tools aimed at refining a digital health intervention require iterative use to enable convergence on an optimal, usable design. ‘Continuous improvement’ allowed feedback from users to have an immediate impact on the design of the system (e.g., collection of quality data), resulting in high compliance with self-monitoring over a prolonged period of time (12-month). Health professionals were prompted by prioritisation algorithms to review patient data, which led to their regular use of the remote monitoring website throughout the trial. Trial registration: Trial registration: ISRCTN40367841. Registered 17/10/2012.}, + langid = {english}, + file = {/home/src/Offline/Papers/on behalf of the edge copd team et al_2017_digital health system for personalised copd long-term management.pdf} +} + +@online{OnlineMaterialsInformation, + title = {Online {{Materials Information Resource}} - {{MatWeb}}}, + url = {http://www.matweb.com/}, + urldate = {2020-04-27}, + file = {/home/cedarprince/Zotero/storage/P3B7K5Z4/www.matweb.com.html} +} + +@book{oppenheimDiscretetimeSignalProcessing1999, + title = {Discrete-Time Signal Processing}, + author = {Oppenheim, Alan V. and Schafer, Ronald W. and Buck, John R.}, + date = {1999}, + edition = {2nd ed}, + publisher = {{Prentice Hall}}, + location = {{Upper Saddle River, N.J}}, + isbn = {978-0-13-754920-7}, + pagetotal = {870}, + keywords = {Discrete-time systems,Mathematics,Signal processing,textbook}, + file = {/home/src/Papers/oppenheim et al_1999_discrete-time signal processing.pdf} +} + +@misc{oppenheimSignalsSystems, + title = {Signals and {{Systems}}}, + author = {Oppenheim, Alan V. and Willsky, Alan}, + keywords = {textbook}, + file = {/home/src/Papers/oppenheim_willsky_signals and systems.pdf} +} + +@online{OrderEstimoteBeacons, + title = {Order {{Estimote Beacons}}}, + url = {https://order.estimote.com/buy/proximity-devkit-2018}, + urldate = {2020-04-30}, + file = {/home/cedarprince/Zotero/storage/LY3XM32B/proximity-devkit-2018.html} +} + +@misc{orgeraUrbanRuralDifferences, + title = {Urban and Rural Differences in Coronavirus Pandemic Preparedness}, + author = {Orgera, Kendal and McDermott, Daniel and Rae, Matthew and Claxton, Gary and Koma, Wyatt and Cox, Cynthia}, + url = {https://www.healthsystemtracker.org/brief/urban-and-rural-differences-in-coronavirus-pandemic-preparedness/}, + urldate = {2020-04-28}, + abstract = {The coronavirus outbreak has hit densely populated urban areas of the United States first and hardest. Some health systems have experienced surges of patients, raising concerns that there are not enough hospital beds, staffing, and equipment. The novel coronavirus was slower to spread to rural areas in the U.S., but that appears to be changing, …}, + langid = {american}, + file = {/home/cedarprince/Zotero/storage/F7KGKWSU/urban-and-rural-differences-in-coronavirus-pandemic-preparedness.html} +} + +@article{ormstad2018role, + title = {Role of the Immune System in Autism Spectrum Disorders ({{ASD}})}, + author = {Ormstad, Heidi and Bryn, Vesna and Saugstad, Ola D and Skjeldal, Ola and Maes, Michael}, + date = {2018}, + journaltitle = {CNS \& Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS \& Neurological Disorders)}, + shortjournal = {CNS Neurol. Disord.-Drug Targets Former. Curr. Drug Targets-CNS Neurol. Disord.}, + volume = {17}, + number = {7}, + pages = {489--495}, + publisher = {{Bentham Science Publishers}} +} + +@article{ornstein2015epidemiology, + title = {Epidemiology of the Homebound Population in the {{United States}}}, + author = {Ornstein, Katherine A and Leff, Bruce and Covinsky, Kenneth E and Ritchie, Christine S and Federman, Alex D and Roberts, Laken and Kelley, Amy S and Siu, Albert L and Szanton, Sarah L}, + date = {2015}, + journaltitle = {JAMA internal medicine}, + shortjournal = {JAMA Intern. Med.}, + volume = {175}, + number = {7}, + pages = {1180--1186}, + publisher = {{American Medical Association}} +} + +@article{orwellAnimalFarmFairy, + title = {Animal {{Farm}}: {{A Fairy Story}}}, + author = {Orwell, George}, + pages = {131}, + langid = {english}, + file = {/home/src/Papers/orwell_animal farm.pdf} +} + +@article{osipovObjectiveIdentificationAnalysis2015, + title = {Objective Identification and Analysis of Physiological and Behavioral Signs of Schizophrenia}, + author = {Osipov, Maxim and Behzadi, Yashar and Kane, John M. and Petrides, Georgios and Clifford, Gari D.}, + date = {2015-09-03}, + journaltitle = {Journal of Mental Health}, + shortjournal = {Journal of Mental Health}, + volume = {24}, + number = {5}, + pages = {276--282}, + issn = {0963-8237, 1360-0567}, + doi = {10.3109/09638237.2015.1019048}, + abstract = {Background: A patient’s physical activity is often used by psychiatrists to contribute to the diagnostic process for mental disorders. Typically, it is based mostly on self-reports or observations, and hardly ever upon actigraphy. Other signals related to physiology are rarely used, despite the fact that the autonomic nervous system is often affected by mental disorders. Aim: This study attempted to fuse physiological and physical activity data and discover features that are predictive for schizophrenia. Method: Continuous simultaneous heart rate (HR) and physical activity recordings were made on 16 individuals with schizophrenia and 19 healthy controls. Statistical characteristics of the recorded data were analyzed, as well as non-linear rest–activity measures and disorganization measures. Results: Four most predictive features for schizophrenia were identified, namely, the standard deviation and mode of locomotor activity, dynamics of Multiscale Entropy change over scales of HR signal and the mean HR. A classifier trained on these features provided a cross-validation accuracy of 95.3\% (AUC ¼ 0.99) for differentiating between schizophrenia patients and controls, compared to 78.5 and 85.5\% accuracy (AUC ¼ 0.85 and AUC ¼ 0.90) using only the HR or locomotor activity features. Conclusion: Physiological and physical activity signals provide complimentary information for assessment of mental health.}, + langid = {english}, + file = {/home/src/Offline/Papers/osipov et al_2015_objective identification and analysis of physiological and behavioral signs of.pdf} +} + +@article{ovadyaREDUCINGMALICIOUSUSE2019, + title = {{{REDUCING MALICIOUS USE OF SYNTHETIC MEDIA RESEARCH}}: {{CONSIDERATIONS AND POTENTIAL RELEASE PRACTICES FOR MACHINE LEARNING}}}, + author = {Ovadya, Aviv and Whittlestone, Jess}, + date = {2019}, + pages = {11}, + abstract = {The aim of this paper is to facilitate nuanced discussion around research norms and practices to mitigate the harmful impacts of advances in machine learning (ML). We focus particularly on the use of ML to create “synthetic media” (e.g. to generate or manipulate audio, video, images, and text), and the question of what publication and release processes around such research might look like, though many of the considerations discussed will apply to ML research more broadly. We are not arguing for any specific approach on when or how research should be distributed, but instead try to lay out some useful tools, analogies, and options for thinking about these issues.}, + langid = {english}, + file = {/home/src/Offline/Papers/ovadya_whittlestone_2019_reducing malicious use of synthetic media research.pdf} +} + +@article{overhage2012validation, + title = {Validation of a Common Data Model for Active Safety Surveillance Research}, + author = {Overhage, J Marc and Ryan, Patrick B and Reich, Christian G and Hartzema, Abraham G and Stang, Paul E}, + date = {2012}, + journaltitle = {Journal of the American Medical Informatics Association}, + shortjournal = {J. Am. Med. Inform. Assoc.}, + volume = {19}, + number = {1}, + pages = {54--60}, + publisher = {{BMJ Group BMA House, Tavistock Square, London, WC1H 9JR}} +} + +@article{owens2002fatal, + title = {Fatal and Non-Fatal Repetition of Self-Harm: Systematic Review}, + author = {Owens, David and Horrocks, Judith and House, Allan}, + date = {2002}, + journaltitle = {The British Journal of Psychiatry}, + shortjournal = {Br. J. Psychiatry}, + volume = {181}, + number = {3}, + pages = {193--199}, + publisher = {{Cambridge University Press}} +} + +@article{ozonoff2011recurrence, + title = {Recurrence Risk for Autism Spectrum Disorders: A Baby Siblings Research Consortium Study}, + author = {Ozonoff, Sally and Young, Gregory S and Carter, Alice and Messinger, Daniel and Yirmiya, Nurit and Zwaigenbaum, Lonnie and Bryson, Susan and Carver, Leslie J and Constantino, John N and Dobkins, Karen and others}, + date = {2011}, + journaltitle = {Pediatrics}, + volume = {128}, + number = {3}, + pages = {e488-e495}, + publisher = {{Am Acad Pediatrics}} +} + +@article{padovanProportionSciencePhilosophy2002, + title = {Proportion: {{Science}}, {{Philosophy}}, {{Architecture}}}, + shorttitle = {Proportion}, + author = {Padovan, Richard}, + date = {2002}, + journaltitle = {Nexus Network Journal}, + shortjournal = {Nexus Netw. J.}, + volume = {4}, + number = {1}, + pages = {113--122}, + doi = {10.1007/s00004-001-0008-7}, + file = {/home/src/Offline/Papers/padovan_2002_proportion.pdf;/home/cedarprince/Zotero/storage/ECAB9AQC/Golden_ratio.html} +} + +@article{palinkas1990biocultural, + title = {The Biocultural Context of Social Networks and Depression among the Elderly}, + author = {Palinkas, Lawrence A and Wingard, Deborah L and Barrett-Connor, Elizabeth}, + date = {1990}, + journaltitle = {Social Science \& Medicine}, + shortjournal = {Soc. Sci. Med.}, + volume = {30}, + number = {4}, + pages = {441--447}, + publisher = {{Elsevier}} +} + +@article{palmius2014multi, + title = {A Multi-Sensor Monitoring System for Objective Mental Health Management in Resource Constrained Environments}, + author = {Palmius, Nick and Osipov, M and Bilderbeck, AC and Goodwin, GM and Saunders, K and Tsanas, A and Clifford, GD}, + date = {2014}, + publisher = {{IET}} +} + +@article{palmiusDetectingBipolarDepression2017, + title = {Detecting {{Bipolar Depression From Geographic Location Data}}}, + author = {Palmius, N. and Tsanas, A. and Saunders, K. E. A. and Bilderbeck, A. C. and Geddes, J. R. and Goodwin, G. M. and De Vos, M.}, + date = {2017-08}, + journaltitle = {IEEE Transactions on Biomedical Engineering}, + shortjournal = {IEEE Trans. Biomed. Eng.}, + volume = {64}, + number = {8}, + pages = {1761--1771}, + issn = {0018-9294, 1558-2531}, + doi = {10.1109/TBME.2016.2611862}, + langid = {english}, + file = {/home/src/Offline/Papers/palmius et al_2017_detecting bipolar depression from geographic location data.pdf} +} + +@article{pandeArtificialIntelligenceBlack18, + title = {Artificial {{Intelligence}}'s '{{Black Box}}' {{Is Nothing}} to {{Fear}}}, + author = {Pande, Vijay}, + date = {0018-01-25}, + journaltitle = {The New York Times}, + url = {https://www.nytimes.com/2018/01/25/opinion/artificial-intelligence-black-box.html}, + urldate = {2018-02-04}, + entrysubtype = {newspaper}, + keywords = {\#nosource} +} + +@article{paperAccurateLocationDetection, + title = {Accurate {{Location Detection}}}, + author = {Paper, White}, + pages = {7}, + langid = {english}, + file = {/home/src/Offline/Papers/paper_accurate location detection.pdf} +} + +@article{pareek2020ethnicity, + title = {Ethnicity and {{COVID-19}}: An Urgent Public Health Research Priority}, + author = {Pareek, Manish and Bangash, Mansoor N and Pareek, Nilesh and Pan, Daniel and Sze, Shirley and Minhas, Jatinder S and Hanif, Wasim and Khunti, Kamlesh}, + date = {2020}, + journaltitle = {The Lancet}, + volume = {395}, + number = {10234}, + pages = {1421--1422}, + publisher = {{Elsevier}} +} + +@article{park1999subband, + title = {Subband-Based Blind Signal Separation for Noisy Speech Recognition}, + author = {Park, Hyung-Min and Jung, Ho-Young and Lee, Te-Won and Lee, Soo-Young}, + date = {1999}, + journaltitle = {Electronics Letters}, + shortjournal = {Electron. Lett.}, + volume = {35}, + number = {23}, + pages = {2011--2012}, + publisher = {{IET}} +} + +@article{park2011reliability, + title = {Reliability and Usefulness of the Pressure Pain Threshold Measurement in Patients with Myofascial Pain}, + author = {Park, Giburm and Kim, Chan Woo and Park, Si Bog and Kim, Mi Jung and Jang, Seong Ho}, + date = {2011}, + journaltitle = {Annals of rehabilitation medicine}, + shortjournal = {Ann. Rehabil. Med.}, + volume = {35}, + number = {3}, + pages = {412}, + publisher = {{Korean Academy of Rehabilitation Medicine}} +} + +@article{park2020early, + title = {Early Release-Coronavirus Disease Outbreak in Call Center, South Korea}, + author = {Park, Shin Young and Kim, Young-Man and Yi, Seonju and Lee, Sangeun and Na, Baeg-Ju and Kim, Chang Bo and Kim, Jung-il and Kim, Hea Sook and Kim, Young Bok and Park, Yoojin and others}, + date = {2020} +} + +@inproceedings{paterDefiningDigitalSelfHarm2017, + title = {Defining {{Digital Self-Harm}}}, + booktitle = {Proceedings of the 2017 {{ACM Conference}} on {{Computer Supported Cooperative Work}} and {{Social Computing}}}, + author = {Pater, Jessica and Mynatt, Elizabeth}, + date = {2017-02-25}, + pages = {1501--1513}, + publisher = {{ACM}}, + location = {{Portland Oregon USA}}, + doi = {10.1145/2998181.2998224}, + abstract = {Self-harm is the infliction of pain or injury onto oneself. Though historically these behaviors were relegated to the fringes of communities, information technology now enables new ways to foster and encourage these dangerous activities. This paper defines the concept of digital selfharm as the online communication and activity that leads to, supports, or exacerbates, non-suicidal yet intentional harm or impairment of an individual’s physical wellbeing. We outline a research agenda for the CSCW community to understand the correlation and possible causation of offline self-harm behaviors due to online activities, and to design and assess technologies focused on prevention, mitigation and treatment. CAUTION: This paper includes media that could potentially be triggering to those dealing with an eating disorder or with other self-harm related illnesses. Please use caution when reading or disseminating this paper.}, + eventtitle = {{{CSCW}} '17: {{Computer Supported Cooperative Work}} and {{Social Computing}}}, + isbn = {978-1-4503-4335-0}, + langid = {english}, + file = {/home/src/Papers/pater_mynatt_2017_defining digital self-harm.pdf} +} + +@inproceedings{patterson2003inferring, + title = {Inferring High-Level Behavior from Low-Level Sensors}, + booktitle = {International Conference on Ubiquitous Computing}, + author = {Patterson, Donald J and Liao, Lin and Fox, Dieter and Kautz, Henry}, + date = {2003}, + pages = {73--89}, + organization = {{Springer}}, + keywords = {\#nosource} +} + +@unpublished{pattersonCategoricalDataStructures2021, + title = {Categorical {{Data Structures}} for {{Technical Computing}}}, + author = {Patterson, Evan and Lynch, Owen and Fairbanks, James}, + date = {2021-06-08}, + shortjournal = {ArXiv210604703 Cs Math}, + eprint = {2106.04703}, + eprinttype = {arxiv}, + primaryclass = {cs, math}, + url = {http://arxiv.org/abs/2106.04703}, + urldate = {2021-09-27}, + abstract = {Many mathematical objects can be represented as functors from finitely-presented categories \$\textbackslash mathsf\{C\}\$ to \$\textbackslash mathsf\{Set\}\$. For instance, graphs are functors to \$\textbackslash mathsf\{C\}\$ from the category with two parallel arrows. Such functors are known informally as \$\textbackslash mathsf\{C\}\$-sets. In this paper, we describe and implement an extension of \$\textbackslash mathsf\{C\}\$-sets having data attributes with fixed types, such as graphs with labeled vertices or real-valued edge weights. We call such structures "acsets," short for "attributed \$\textbackslash mathsf\{C\}\$-sets." Derived from previous work on algebraic databases, acsets are a joint generalization of graphs and data frames. They also encompass more elaborate graph-like objects such as wiring diagrams and Petri nets with rate constants. We develop the mathematical theory of acsets and then describe a generic implementation in the Julia programming language, which uses advanced language features to achieve performance comparable with specialized data structures.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {Computer Science - Databases,Computer Science - Logic in Computer Science,Mathematics - Category Theory}, + file = {/Users/jzelko3/Knowledgebase/Papers/Patterson et al_2021_Categorical Data Structures for Technical Computing.pdf} +} + +@book{pawsonRealisticEvaluation2003, + title = {Realistic {{Evaluation}}}, + author = {Pawson, Ray and Tilley, Nick}, + date = {2003}, + publisher = {{SAGE Publications Ltd}}, + file = {/home/jacob/Dropbox/Papers/Pawson and Tilley - 2003 - Realistic Evaluation.pdf} +} + +@online{PDASocietyManaging, + title = {{{PDA Society}} • {{Managing}} Meltdowns}, + url = {https://www.pdasociety.org.uk/families/managing-meltdowns}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/FFNQ6TUT/managing-meltdowns.html} +} + +@article{peak2020individual, + title = {Individual Quarantine versus Active Monitoring of Contacts for the Mitigation of {{COVID-19}}: A Modelling Study}, + author = {Peak, Corey M and Kahn, Rebecca and Grad, Yonatan H and Childs, Lauren M and Li, Ruoran and Lipsitch, Marc and Buckee, Caroline O}, + date = {2020}, + journaltitle = {The Lancet Infectious Diseases}, + shortjournal = {Lancet Infect. Dis.}, + publisher = {{Elsevier}} +} + +@book{pearlBookWhyNew2018, + title = {The Book of Why: The New Science of Cause and Effect}, + shorttitle = {The Book of Why}, + author = {Pearl, Judea and Mackenzie, Dana}, + date = {2018}, + edition = {First edition}, + publisher = {{Basic Books}}, + location = {{New York}}, + abstract = {"Everyone has heard the claim, "Correlation does not imply causation." What might sound like a reasonable dictum metastasized in the twentieth century into one of science's biggest obstacles, as a legion of researchers became unwilling to make the claim that one thing could cause another. Even two decades ago, asking a statistician a question like "Was it the aspirin that stopped my headache?" would have been like asking if he believed in voodoo, or at best a topic for conversation at a cocktail party rather than a legitimate target of scientific inquiry. Scientists were allowed to posit only that the probability that one thing was associated with another. This all changed with Judea Pearl, whose work on causality was not just a victory for common sense, but a revolution in the study of the world"--}, + isbn = {978-0-465-09760-9}, + langid = {english}, + pagetotal = {418}, + keywords = {Causation,Inference}, + file = {/home/src/Papers/pearl_mackenzie_2018_the book of why.pdf} +} + +@book{pearlCausalityModelsReasoning2009, + title = {Causality {{Models}}, {{Reasoning}} and {{Inference}} by {{Judea Pearl}}}, + author = {Pearl, Judea}, + date = {2009}, + abstract = {Written by one of the preeminent researchers in the field, this book provides a comprehensive exposition of modern analysis of causation. It shows how causality has grown from a nebulous concept into a mathematical theory with significant applications in the fields of statistics, artificial intelligence, economics, philosophy, cognitive science, and the health and social sciences. Judea Pearl presents a comprehensive theory of causality which unifies the probabilistic, manipulative, counterfactual, and structural approaches to causation and offers simple mathematical tools for studying the relationships between causal connections and statistical associations. The book opens the way for including causal analysis in the standard curricula of statistics, artificial intelligence, business, epidemiology, social sciences, and economics. Students in these fields will find natural models, simple inferential procedures, and precise mathematical definitions of causal concepts that traditional texts have evaded or made unduly complicated. The first edition of Causality has led to a paradigmatic change in the way that causality is treated in statistics, philosophy, computer science, social science, and economics. Cited in more than 2,800 scientific publications, it continues to liberate scientists from the traditional molds of statistical thinking. In this revised edition, Pearl elucidates thorny issues, answers readers’ questions, and offers a panoramic view of recent advances in this field of research. Causality will be of interest to students and professionals in a wide variety of fields. Anyone who wishes to elucidate meaningful relationships from data, predict effects of actions and policies, assess explanations of reported events, or form theories of causal understanding and causal speech will find this book stimulating and invaluable.}, + file = {/home/src/Offline/Papers/pearl_2009_causality models, reasoning and inference by judea pearl.pdf} +} + +@online{PediatricYouthNeoprene, + title = {Pediatric \& {{Youth Neoprene Ankle Support Sleeve Brace}}, {{FLA}}}, + url = {https://www.hightidehealth.com/fla-pediatric-neoprene-ankle-support-sleeve-brace.html}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/RJMU9QCI/fla-pediatric-neoprene-ankle-support-sleeve-brace.html} +} + +@incollection{peirisCoronaviruses2012, + title = {Coronaviruses}, + booktitle = {Medical {{Microbiology}}}, + author = {Peiris, J.S.M.}, + date = {2012}, + pages = {587--593}, + publisher = {{Elsevier}}, + doi = {10.1016/B978-0-7020-4089-4.00072-X}, + isbn = {978-0-7020-4089-4}, + langid = {english}, + file = {/home/src/Offline/Papers/peiris_2012_coronaviruses.pdf} +} + +@article{perrin2015americans, + title = {Americans’ Internet Access: 2000-2015}, + author = {Perrin, Andrew and Duggan, Maeve}, + date = {2015}, + publisher = {{Pew Research Center}} +} + +@article{petersenCurrentConceptsMild2001, + title = {Current {{Concepts}} in {{Mild Cognitive Impairment}}}, + author = {Petersen, Ronald C. and Doody, Rachelle and Kurz, Alexander and Mohs, Richard C. and Morris, John C. and Rabins, Peter V. and Ritchie, Karen and Rossor, Martin and Thal, Leon and Winblad, Bengt}, + date = {2001-12-01}, + journaltitle = {Archives of Neurology}, + shortjournal = {Arch Neurol}, + volume = {58}, + number = {12}, + pages = {1985}, + issn = {0003-9942}, + doi = {10.1001/archneur.58.12.1985}, + langid = {english}, + file = {/home/src/Offline/Papers/petersen et al_2001_current concepts in mild cognitive impairment.pdf} +} + +@article{petersenMildCognitiveImpairment2004, + title = {Mild Cognitive Impairment as a Diagnostic Entity}, + author = {Petersen, R. C.}, + date = {2004-09}, + journaltitle = {Journal of Internal Medicine}, + shortjournal = {J Intern Med}, + volume = {256}, + number = {3}, + pages = {183--194}, + issn = {0954-6820, 1365-2796}, + doi = {10.1111/j.1365-2796.2004.01388.x}, + abstract = {Petersen RC (Mayo Clinic College of Medicine, Rochester, MN, USA). Mild cognitive impairment as a diagnostic entity (Key Symposium). J Intern Med 2004; 256: 183–194.}, + langid = {english}, + file = {/home/src/Offline/Papers/petersen_2004_mild cognitive impairment as a diagnostic entity.pdf} +} + +@article{petersenMildCognitiveImpairment2005, + title = {Mild {{Cognitive Impairment}} as a {{Clinical Entity}} and {{Treatment Target}}}, + author = {Petersen, Ronald C. and Morris, John C.}, + date = {2005-07-01}, + journaltitle = {Archives of Neurology}, + shortjournal = {Arch Neurol}, + volume = {62}, + number = {7}, + pages = {1160}, + issn = {0003-9942}, + doi = {10.1001/archneur.62.7.1160}, + abstract = {Mild cognitive impairment is an evolving construct. While appropriate questions have been raised concerning its definition, outcome, and potential treatments, considerable progress has been made. We agree with Gauthier and Touchon4 that MCI is heterogeneous. The heterogeneity reflects a refinement of the entity rather than a weakness. Just as the construct of dementia has been refined over the years to reflect increasing sophistication in diagnostic skill, so has the characterization of MCI been refined. If the approach to classifying the syndrome of MCI into multiple subtypes is combined with the presumed etiology, much of the variability in the literature can be resolved.}, + langid = {english}, + file = {/home/src/Offline/Papers/petersen_morris_2005_mild cognitive impairment as a clinical entity and treatment target.pdf} +} + +@article{petersenMildCognitiveImpairment2009, + title = {Mild {{Cognitive Impairment}}: {{Ten Years Later}}}, + shorttitle = {Mild {{Cognitive Impairment}}}, + author = {Petersen, Ronald C. and Roberts, Rosebud O. and Knopman, David S. and Boeve, Bradley F. and Geda, Yonas E. and Ivnik, Robert J. and Smith, Glenn E. and Jack, Clifford R.}, + date = {2009-12-01}, + journaltitle = {Archives of Neurology}, + shortjournal = {Arch Neurol}, + volume = {66}, + number = {12}, + issn = {0003-9942}, + doi = {10.1001/archneurol.2009.266}, + langid = {english}, + file = {/home/src/Offline/Papers/petersen et al_2009_mild cognitive impairment.pdf} +} + +@article{picard2012washable, + title = {Washable Wearable Biosensor}, + author = {Picard, Rosalind W and Williams, Clayton J and Fletcher, Richard Ribon and Eydgahi, Hoda and Poh, Ming-Zher and Wilder-Smith, Oliver Orion and Kyunghee, KIM and Dobson, Kelly and Lee, Jackie Chia-Hsun}, + date = {2012-03-20}, + publisher = {{Google Patents}} +} + +@article{picardFutureAffectiveTechnology2009, + title = {Future Affective Technology for Autism and Emotion Communication}, + author = {Picard, Rosalind W.}, + date = {2009-12-12}, + journaltitle = {Philosophical Transactions of the Royal Society B: Biological Sciences}, + shortjournal = {Phil. Trans. R. Soc. B}, + volume = {364}, + number = {1535}, + pages = {3575--3584}, + issn = {0962-8436, 1471-2970}, + doi = {10.1098/rstb.2009.0143}, + langid = {english}, + file = {/home/src/Offline/Papers/picard_2009_future affective technology for autism and emotion communication.pdf} +} + +@article{picardMultipleArousalTheory2016, + title = {Multiple {{Arousal Theory}} and {{Daily-Life Electrodermal Activity Asymmetry}}}, + author = {Picard, Rosalind W. and Fedor, Szymon and Ayzenberg, Yadid}, + date = {2016-01}, + journaltitle = {Emotion Review}, + shortjournal = {Emotion Review}, + volume = {8}, + number = {1}, + pages = {62--75}, + issn = {1754-0739, 1754-0747}, + doi = {10.1177/1754073914565517}, + abstract = {Using “big data” from sensors worn continuously outside the lab, researchers have observed patterns of objective physiology that challenge some of the long-standing theoretical concepts of emotion and its measurement. One challenge is that emotional arousal, when measured as sympathetic nervous system activation through electrodermal activity, can sometimes differ significantly across the two halves of the upper body. We show that traditional measures on only one side may lead to misjudgment of arousal. This article presents daily life and controlled study data, as well as existing evidence from neuroscience, supporting the influence of multiple emotional substrates in the brain causing innervation on different sides of the body. We describe how a theory of multiple arousals explains the asymmetric EDA findings.}, + langid = {english}, + file = {/home/src/Offline/Papers/picard et al_2016_multiple arousal theory and daily-life electrodermal activity asymmetry.pdf} +} + +@article{pierannunziSystematicReviewPublications2013, + title = {A Systematic Review of Publications Assessing Reliability and Validity of the {{Behavioral Risk Factor Surveillance System}} ({{BRFSS}}), 2004–2011}, + author = {Pierannunzi, Carol and Hu, Shaohua Sean and Balluz, Lina}, + date = {2013-12}, + journaltitle = {BMC Medical Research Methodology}, + shortjournal = {BMC Med Res Methodol}, + volume = {13}, + number = {1}, + pages = {49}, + issn = {1471-2288}, + doi = {10.1186/1471-2288-13-49}, + abstract = {Background: In recent years response rates on telephone surveys have been declining. Rates for the behavioral risk factor surveillance system (BRFSS) have also declined, prompting the use of new methods of weighting and the inclusion of cell phone sampling frames. A number of scholars and researchers have conducted studies of the reliability and validity of the BRFSS estimates in the context of these changes. As the BRFSS makes changes in its methods of sampling and weighting, a review of reliability and validity studies of the BRFSS is needed. Methods: In order to assess the reliability and validity of prevalence estimates taken from the BRFSS, scholarship published from 2004–2011 dealing with tests of reliability and validity of BRFSS measures was compiled and presented by topics of health risk behavior. Assessments of the quality of each publication were undertaken using a categorical rubric. Higher rankings were achieved by authors who conducted reliability tests using repeated test/ retest measures, or who conducted tests using multiple samples. A similar rubric was used to rank validity assessments. Validity tests which compared the BRFSS to physical measures were ranked higher than those comparing the BRFSS to other self-reported data. Literature which undertook more sophisticated statistical comparisons was also ranked higher. Results: Overall findings indicated that BRFSS prevalence rates were comparable to other national surveys which rely on self-reports, although specific differences are noted for some categories of response. BRFSS prevalence rates were less similar to surveys which utilize physical measures in addition to self-reported data. There is very little research on reliability and validity for some health topics, but a great deal of information supporting the validity of the BRFSS data for others. Conclusions: Limitations of the examination of the BRFSS were due to question differences among surveys used as comparisons, as well as mode of data collection differences. As the BRFSS moves to incorporating cell phone data and changing weighting methods, a review of reliability and validity research indicated that past BRFSS landline only data were reliable and valid as measured against other surveys. New analyses and comparisons of BRFSS data which include the new methodologies and cell phone data will be needed to ascertain the impact of these changes on estimates in the future.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/VWAF7MSQ/Pierannunzi et al. - 2013 - A systematic review of publications assessing reli.pdf} +} + +@book{pimsleurModernStandardArabic2012, + title = {Modern {{Standard Arabic}}}, + author = {{Pimsleur}}, + date = {2012}, + publisher = {{Simon \& Schuster, Inc.}}, + file = {/home/src/Offline/Papers/pimsleur_2012_modern standard arabic.pdf} +} + +@article{pinkerWhyAcademicsStink, + title = {Why {{Academics Stink}} at {{Writing}}}, + author = {Pinker, Steven}, + pages = {16}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/FEN97UM2/Pinker - Why Academics Stink at Writing.pdf} +} + +@online{pishbinSinglestepElectrochemicalDeposition, + title = {Single-Step Electrochemical Deposition of Antimicrobial Orthopaedic Coatings Based on a Bioactive Glass/Chitosan/Nano-Silver Composite System}, + author = {Pishbin, F. and Mourino, V. and Gilchrist, J. and McComb, D. and Kreppel, S. and Salih, V.}, + url = {http://ezproxy.corning-cc.edu:2120/science/article/pii/S1742706113001244?np=y}, + urldate = {2016-02-20}, + file = {/home/cedarprince/Zotero/storage/JSJM98T9/S1742706113001244.html} +} + +@book{pitreJesusJewishRoots2011, + title = {Jesus and the {{Jewish}} Roots of the {{Eucharist}}: Unlocking the Secrets of the {{Last Supper}}}, + shorttitle = {Jesus and the {{Jewish}} Roots of the {{Eucharist}}}, + author = {Pitre, Brant James}, + date = {2011}, + edition = {1st ed}, + publisher = {{Doubleday}}, + location = {{New York}}, + abstract = {Examines the Last Supper from a Jewish perspective, describing Passover during the time of Jesus Christ and the meaning behind his Eucharistic words, and discussing ancient Jewish beliefs about the Passover, the Manna, and the Bread of Presence}, + isbn = {978-0-385-53184-9 978-0-385-53186-3}, + langid = {english}, + pagetotal = {228}, + keywords = {_tablet,Catholic Church,History,Judaism,Lord's Supper,Relations Catholic Church,Relations Judaism}, + annotation = {OCLC: ocn630500245}, + file = {/home/src/Papers/pitre_2011_jesus and the jewish roots of the eucharist.pdf} +} + +@online{PLAVsABS, + title = {{{PLA}} vs. {{ABS}}: {{What}}'s the Difference?}, + shorttitle = {{{PLA}} vs. {{ABS}}}, + url = {https://www.3dhubs.com/knowledge-base/pla-vs-abs-whats-difference/}, + urldate = {2020-04-27}, + abstract = {PLA and ABS are the most popular materials on 3D Hubs. This comparison will help you select the best option for your project.}, + langid = {english}, + organization = {{3D Hubs}}, + file = {/home/cedarprince/Zotero/storage/V8HZ925S/pla-vs-abs-whats-difference.html} +} + +@misc{POSITIVENEGATIVESYNDROME, + title = {{{POSITIVE AND NEGATIVE SYNDROME SCALE}} ({{PANSS}}) {{RATING CRITERIA}}}, + keywords = {schizophrenia}, + file = {/home/src/Offline/Papers/positive and negative syndrome scale (panss) rating criteria.pdf} +} + +@article{posner1980attention, + title = {Attention and the Detection of Signals.}, + author = {Posner, Michael I and Snyder, Charles R and Davidson, Brian J}, + date = {1980}, + journaltitle = {Journal of experimental psychology: General}, + shortjournal = {J. Exp. Psychol. Gen.}, + volume = {109}, + number = {2}, + pages = {160}, + publisher = {{American Psychological Association}} +} + +@article{posner2004attention, + title = {Attention and Cognitive Control}, + author = {Posner, Michael I and Snyder, Charles R and Solso, R}, + date = {2004}, + journaltitle = {Cognitive psychology: Key readings}, + shortjournal = {Cogn. Psychol. Key Read.}, + volume = {205}, + publisher = {{Psychology Press New York, NY}} +} + +@article{powellApplyingHealthJustice2020, + title = {Applying the {{Health Justice Framework}} to {{Address Health}} and {{Health Care Inequities Experienced}} by {{People}} with {{Disabilities During}} and {{After COVID-19}}}, + author = {Powell, Robyn}, + date = {2020}, + journaltitle = {SSRN Electronic Journal}, + shortjournal = {SSRN Journal}, + issn = {1556-5068}, + doi = {10.2139/ssrn.3687730}, + abstract = {The COVID-19 pandemic has been especially devastating for people with disabilities, as well as other members of marginalized communities. Indeed, an emerging body of scholarship has revealed striking disparities experienced by people with disabilities. In particular, scholars have shined a light on issues relating to triage policies that allow for the rationing of critical health care and resources, such as ventilators, for people with disabilities if resources become limited and hospitals cannot treat all patients during the pandemic. These injustices are a deserving issue that urgently warrants extensive consideration by policymakers, legal professionals, and scholars.}, + langid = {english}, + file = {/home/src/Papers/powell_2020_applying the health justice framework to address health and health care.pdf} +} + +@article{pradeepNobleMetalNanoparticles2009, + title = {Noble Metal Nanoparticles for Water Purification: {{A}} Critical Review}, + author = {Pradeep, T. and {Anshup}}, + date = {2009-10-30}, + journaltitle = {Thin Solid Films}, + shortjournal = {Thin Solid Films}, + volume = {517}, + number = {24}, + pages = {6441--6478}, + issn = {0040-6090}, + doi = {10.1016/j.tsf.2009.03.195}, + keywords = {Drinking water,Heavy metal ions,Micro-organisms,Nanoparticles,Nanotechnology,Noble metals,Pesticides,Water purification}, + file = {/home/cedarprince/Zotero/storage/P6R8MU54/S004060900900683X.html} +} + +@online{PradeepResearchGroup, + title = {Pradeep {{Research Group}}}, + url = {http://www.dstuns.iitm.ac.in/complete-list.php}, + urldate = {2015-11-08}, + file = {/home/cedarprince/Zotero/storage/A5AVXJ88/complete-list.html} +} + +@book{prasher2008physical, + title = {Physical Health of Adults with Intellectual Disabilities}, + author = {Prasher, Vee and Janicki, Matthew}, + date = {2008}, + publisher = {{John Wiley \& Sons}} +} + +@report{PregnancyMortalitySurveillance, + title = {Pregnancy {{Mortality Surveillance System}}}, + institution = {{Centers for Disease Control}}, + url = {https://www.cdc.gov/reproductivehealth/maternalinfanthealth/pregnancy-mortality-surveillance-system.htm}, + keywords = {\#nosource} +} + +@online{PrevalenceCerebralPalsy, + title = {Prevalence of {{Cerebral Palsy}} | {{Incidence}} | {{CerebralPalsy}}.{{orgCerebralPalsy}}.Org}, + url = {https://www.cerebralpalsy.org/about-cerebral-palsy/prevalence-and-incidence}, + urldate = {2020-02-26}, + file = {/home/cedarprince/Zotero/storage/NXENJ3RT/prevalence-and-incidence.html} +} + +@article{prince2017relationship, + title = {The Relationship between Autism Symptoms and Arousal Level in Toddlers with Autism Spectrum Disorder, as Measured by Electrodermal Activity}, + author = {Prince, Emily Barbara and Kim, Elizabeth S and Wall, Carla Anne and Gisin, Eugenia and Goodwin, Matthew S and Simmons, Elizabeth Schoen and Chawarska, Kaisa and Shic, Frederick}, + date = {2017}, + journaltitle = {Autism}, + volume = {21}, + number = {4}, + pages = {504--508}, + publisher = {{SAGE Publications Sage UK: London, England}} +} + +@article{przybylski2017large, + title = {A Large-Scale Test of the Goldilocks Hypothesis: Quantifying the Relations between Digital-Screen Use and the Mental Well-Being of Adolescents}, + author = {Przybylski, Andrew K and Weinstein, Netta}, + date = {2017}, + journaltitle = {Psychological Science}, + shortjournal = {Psychol. Sci.}, + volume = {28}, + number = {2}, + pages = {204--215}, + publisher = {{Sage Publications Sage CA: Los Angeles, CA}} +} + +@article{pyc2009testing, + title = {Testing the Retrieval Effort Hypothesis: {{Does}} Greater Difficulty Correctly Recalling Information Lead to Higher Levels of Memory?}, + author = {Pyc, Mary A and Rawson, Katherine A}, + date = {2009}, + journaltitle = {Journal of Memory and Language}, + shortjournal = {J. Mem. Lang.}, + volume = {60}, + number = {4}, + pages = {437--447}, + publisher = {{Elsevier}} +} + +@article{qiuChinaSpendBillions2011, + title = {China to {{Spend Billions Cleaning Up Groundwater}}}, + author = {Qiu, Jane}, + date = {2011-11-11}, + journaltitle = {Science}, + shortjournal = {Science}, + volume = {334}, + number = {6057}, + pages = {745--745}, + doi = {10.1126/science.334.6057.745}, + keywords = {\#nosource} +} + +@online{quarlesLetterStravaCommunity, + title = {A {{Letter}} to the {{Strava Community}}}, + author = {Quarles, James}, + url = {https://blog.strava.com/press/a-letter-to-the-strava-community/}, + urldate = {2018-02-04}, + organization = {{A Letter to the Strava Community}}, + keywords = {\#nosource} +} + +@inproceedings{quigleyNormativeMisperceptionsSuicidal2014, + title = {Normative Misperceptions of Suicidal and Self-Harming Behaviours in an Undergraduate Student Population}, + author = {Quigley, Jody and Rasmussen, Susan and Mcalaney, John}, + date = {2014-04-24}, + abstract = {Introduction: A systematic review of 86 papers revealed that adolescents’ suicidal and self-harming behaviour is positively associated with similar behaviours in people they know. Social norms research into other damaging health behaviours suggests that one’s engagement in a given behaviour is related to perceived social norms surrounding that behaviour, but social norms are often misperceived, such that it may be those misperceptions which are related to behaviour. Interventions which reduce such misperceptions have proven effective in reducing those behaviours. The current study aimed to address the dearth of research into the role of social norms regarding suicidal and self-harming behaviours. Method: 184 undergraduates completed an anonymous, online self-report survey exploring their engagement in, and approval of, suicidal and self-harming behaviours, and their perceptions of others’ engagement in (descriptive norms), and approval of (injunctive norms), those behaviours. Results: Consistent with previous social norms research, participants tended to overestimate the descriptive norms of suicidal and self-harming behaviours for less familiar groups (e.g. “students in general”) relative to their own. However, contrary to previous research, they also tended to underestimate descriptive norms for those closer to them (e.g. “your siblings”). No differences were found with regard to injunctive norms. Conclusions: Results suggest that The Social Norms Approach, which has been used in other areas to correct misperceptions and reduce target behaviours, may be applicable to suicidal and self-harming behaviours, but only in terms of descriptive norms. Further research is underway to explore the unexpected findings.} +} + +@online{quinnUseWeeklyReview, + title = {Use a {{Weekly Review List}} to {{Stay}} a {{Step Ahead This Semester}}}, + author = {Quinn, Sean}, + url = {https://lifehacker.com/use-a-weekly-review-list-to-stay-a-step-ahead-this-seme-5611657}, + urldate = {2020-03-19}, + abstract = {Incorporate a weekly review in your schedule this semester and really get things done.}, + langid = {american}, + organization = {{Lifehacker}}, + file = {/home/cedarprince/Zotero/storage/M9Z8CZXW/use-a-weekly-review-list-to-stay-a-step-ahead-this-seme-5611657.html} +} + +@online{Quizlet, + title = {Quizlet}, + url = {https://quizlet.com/}, + urldate = {2020-06-07}, + abstract = {Quizlet makes simple learning tools that let you study anything. Start learning today with flashcards, games and learning tools — all for free.}, + langid = {american}, + organization = {{Quizlet}}, + file = {/home/cedarprince/Zotero/storage/7VW8RDQW/quizlet.com.html} +} + +@article{radloff1977ces, + title = {The {{CES-D}} Scale: {{A}} Self-Report Depression Scale for Research in the General Population}, + author = {Radloff, Lenore Sawyer}, + date = {1977}, + journaltitle = {Applied psychological measurement}, + shortjournal = {Appl. Psychol. Meas.}, + volume = {1}, + number = {3}, + pages = {385--401}, + publisher = {{Sage Publications Sage CA: Thousand Oaks, CA}}, + keywords = {\#nosource} +} + +@article{rajpurkarCheXNetRadiologistLevelPneumonia17, + title = {{{CheXNet}}: {{Radiologist-Level Pneumonia Detection}} on {{Chest X-Rays}} with {{Deep Learning}}}, + author = {Rajpurkar, Pranav and Irvin, Jeremy and Zhu, Kaylie and Yang, Brandon and Mehta, Hershel and Duan, Tony and Ding, Daisy and Bagul, Aarti and Langlotz, Curtis and Shpanskaya, Katie and Lungren, Matthew and Ng, Andrew}, + date = {0017-12-01}, + journaltitle = {CoRR}, + volume = {abs/1711/05225}, + url = {http://arxiv.org/abs/1711.05225}, + urldate = {2018-02-04}, + keywords = {\#nosource} +} + +@article{rapsangScoringSystemsIntensive2014, + title = {Scoring Systems in the Intensive Care Unit: {{A}} Compendium}, + shorttitle = {Scoring Systems in the Intensive Care Unit}, + author = {Rapsang, Amy and Shyam, Devajit C.}, + date = {2014-04}, + journaltitle = {Indian Journal of Critical Care Medicine}, + shortjournal = {Indian J. Crit. Care Med.}, + volume = {18}, + number = {4}, + pages = {220--228}, + issn = {0972-5229, 1998-359X}, + doi = {10.4103/0972-5229.130573}, + abstract = {Severity scales are important adjuncts of treatment in the intensive care unit (ICU) in order to predict patient outcome, comparing quality-of-care and stratification for clinical trials. Even though disease severity scores are not the key elements of treatment, they are however, an essential part of improvement in clinical decisions and in identifying patients with unexpected outcomes. Prediction models do face many challenges, but, proper application of these models helps in decision making at the right time and in decreasing hospital cost. In fact, they have become a necessary tool to describe ICU populations and to explain differences in mortality. However, it is also important to note that the choice of the severity score scale, index, or model should accurately match the event, setting or application; as mis-application, of such systems can lead to wastage of time, increased cost, unwarranted extrapolations and poor science.This article provides a brief overview of ICU severity scales (along with their predicted death/survival rate calculations) developed over the last 3 decades including several of them which has been revised accordingly.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Rapsang_Shyam_2014_Scoring systems in the intensive care unit.pdf} +} + +@article{rashidReviewEmpiricalLiterature2008, + title = {A {{Review}} of the {{Empirical Literature}} on the {{Relationships Between Indoor Environment}} and {{Stress}} in {{Health Care}} and {{Office Settings}}: {{Problems}} and {{Prospects}} of {{Sharing Evidence}}}, + shorttitle = {A {{Review}} of the {{Empirical Literature}} on the {{Relationships Between Indoor Environment}} and {{Stress}} in {{Health Care}} and {{Office Settings}}}, + author = {Rashid, Mahbub and Zimring, Craig}, + date = {2008-03}, + journaltitle = {Environment and Behavior}, + shortjournal = {Environment and Behavior}, + volume = {40}, + number = {2}, + pages = {151--190}, + issn = {0013-9165, 1552-390X}, + doi = {10.1177/0013916507311550}, + langid = {english}, + file = {/home/src/Offline/Papers/rashid_zimring_2008_a review of the empirical literature on the relationships between indoor.pdf} +} + +@online{raspberrypifoundationTeachLearnMakeN.D., + title = {Teach, {{Learn}}, and {{Make}} with {{Raspberry Pi}} – {{Raspberry Pi}}}, + author = {{Raspberry Pi Foundation}}, + year = {N.D.}, + url = {https://www.raspberrypi.org}, + urldate = {2020-04-30}, + file = {/home/cedarprince/Zotero/storage/UGKPJKRV/www.raspberrypi.org.html} +} + +@inproceedings{rauterReliableHumanDetection2013, + title = {Reliable {{Human Detection}} and {{Tracking}} in {{Top-View Depth Images}}}, + booktitle = {2013 {{IEEE Conference}} on {{Computer Vision}} and {{Pattern Recognition Workshops}}}, + author = {Rauter, Michael}, + date = {2013-06}, + pages = {529--534}, + publisher = {{IEEE}}, + location = {{OR, USA}}, + doi = {10.1109/CVPRW.2013.84}, + abstract = {The paper presents a method for human detection and tracking in depth images captured by a top-view camera system. We introduce a new feature descriptor which outperforms state-of-the-art features like Simplified Local Ternary Patterns in the given scenario. We use this feature descriptor to train a head-shoulder detector using a discriminative class scheme. A separate processing step ensures that only a minimal but sufficient number of headshoulder candidates is evaluated. This contributes to an excellent runtime performance. A final tracking step reliably propagates detections in time and provides stable tracking results. The quality of the presented method allows us to recognize many challenging situations with humans tailgating and piggybacking.}, + eventtitle = {2013 {{IEEE Conference}} on {{Computer Vision}} and {{Pattern Recognition Workshops}} ({{CVPRW}})}, + isbn = {978-0-7695-4990-3}, + langid = {english}, + file = {/home/src/Offline/Papers/rauter_2013_reliable human detection and tracking in top-view depth images.pdf} +} + +@article{ray2015disparities, + title = {Disparities in Time Spent Seeking Medical Care in the {{United States}}}, + author = {Ray, Kristin N and Chari, Amalavoyal V and Engberg, John and Bertolet, Marnie and Mehrotra, Ateev}, + date = {2015}, + journaltitle = {JAMA internal medicine}, + shortjournal = {JAMA Intern. Med.}, + volume = {175}, + number = {12}, + pages = {1983--1986}, + publisher = {{American Medical Association}} +} + +@online{RayKurzweilJessica2018, + title = {Ray {{Kurzweil}} \& {{Jessica Coen}} | {{THE POWER OF IDEAS TO TRANSFORM THE WORLD}} | {{SXSW}} 2018 - {{YouTube}}}, + date = {2018-03-14}, + url = {https://www.youtube.com/watch?v=CiLmyA-gAZk}, + urldate = {2018-05-22}, + organization = {{YouTube}}, + keywords = {artificial-intelligence,ethics,sxsw,technology}, + file = {/home/cedarprince/Zotero/storage/7ZSI9KYW/watch.html} +} + +@software{RCallJl2021, + title = {{{RCall}}.Jl}, + date = {2021-08-10T19:40:22Z}, + origdate = {2015-01-02T20:33:30Z}, + url = {https://github.com/JuliaInterop/RCall.jl}, + urldate = {2021-08-13}, + abstract = {Call R from Julia}, + organization = {{Julia Interop}} +} + +@online{RealtimePhysiologicalSignals, + title = {Real-Time Physiological Signals | {{E4 EDA}}/{{GSR}} Sensor}, + url = {https://www.empatica.com/research/e4}, + urldate = {2019-12-10}, + abstract = {The E4 wristband is a wearable wireless device designed for research: acquire continuous physiological data in real time.}, + langid = {american}, + organization = {{Empatica}}, + file = {/home/cedarprince/Zotero/storage/WH4ZJNGJ/e4.html} +} + +@online{RealtimePhysiologicalSignalsa, + title = {Real-Time Physiological Signals | {{E4 EDA}}/{{GSR}} Sensor}, + url = {https://www.empatica.com/research/e4}, + urldate = {2020-02-11}, + abstract = {The E4 wristband is a wearable wireless device designed for research: acquire continuous physiological data in real time.}, + langid = {american}, + organization = {{Empatica}}, + file = {/home/cedarprince/Zotero/storage/78WDY8HG/e4.html} +} + +@article{reeves2020class, + title = {Class and {{COVID}}: {{How}} the Less Affluent Face Double Risks}, + author = {Reeves, R and Rothwell, Jonathan}, + date = {2020}, + journaltitle = {Retrieved March}, + volume = {30}, + pages = {2020} +} + +@article{reevesMentalIllnessSurveillance2011, + title = {Mental Illness Surveillance among Adults in the {{United States}}}, + author = {Reeves, William C. and Pratt, Laura A. and Thompson, William and Ahluwalia, Indu B. and Dhingra, Satvinder S. and McKnight-Eily, Lela R. and Harrison, Leslie and D'Angelo, Denise V. and Williams, Letitia and Morrow, Brian}, + date = {2011} +} + +@article{reinertsenContinuousAssessmentSchizophrenia2017, + title = {Continuous Assessment of Schizophrenia Using Heart Rate and Accelerometer Data}, + author = {Reinertsen, Erik and Osipov, Maxim and Liu, Chengyu and Kane, John M and Petrides, Georgios and Clifford, Gari D}, + date = {2017-06-27}, + journaltitle = {Physiological measurement}, + shortjournal = {Physiol Meas}, + volume = {38}, + number = {7}, + eprint = {28653659}, + eprinttype = {pmid}, + pages = {1456--1471}, + issn = {0967-3334}, + doi = {10.1088/1361-6579/aa724d}, + abstract = {Objective Schizophrenia has been associated with changes in heart rate (HR) and physical activity measures. However, the relationship between analysis window length and classifier accuracy using these features has yet to be quantified. Approach Here we used objective HR and activity data to classify contiguous days of data as belonging to a schizophrenia patient or a healthy control. HR and physical activity recordings were made on 12 medicated subjects with schizophrenia and 12 healthy controls. Features derived from these data included classical statistical characteristics, rest-activity metrics, transfer entropy, and multiscale fuzzy entropy. We varied the analysis window length from two to eight days, and selected features via minimal-redundancy-maximal-relevance. A support vector machine was trained to classify schizophrenia from control windows on a daily basis. Model performance was assessed via subject-wise leave-one-out-crossfold-validation. Main results An analysis window length of eight days resulted in an area under a receiver operating characteristic curve (AUC) of 0.96. Reducing the analysis window length to two days only lowered the AUC to 0.91. The type of most predictive features varied with analysis window length. Significance Our results suggest continuous tracking of subjects with schizophrenia over short time scales may be sufficient to estimate illness severity on a daily basis.}, + pmcid = {PMC5699450}, + file = {/home/src/Offline/Papers/reinertsen et al_2017_continuous assessment of schizophrenia using heart rate and accelerometer data.pdf} +} + +@article{reinertsenMultiscaleNetworkDynamics2018, + title = {Multiscale Network Dynamics between Heart Rate and Locomotor Activity Are Altered in Schizophrenia}, + author = {Reinertsen, Erik and Shashikumar, Supreeth P and Shah, Amit J and Nemati, Shamim and Clifford, Gari D}, + date = {2018-10-30}, + journaltitle = {Physiological Measurement}, + shortjournal = {Physiol. Meas.}, + volume = {39}, + number = {11}, + pages = {115001}, + issn = {1361-6579}, + doi = {10.1088/1361-6579/aae1ed}, + abstract = {Objective.—Changes in heart rate (HR) and locomotor activity reflect changes in autonomic physiology, behavior, and mood. These systems may involve interrelated neural circuits that are altered in psychiatric illness, yet their interactions are poorly understood. We hypothesized interactions between HR and locomotor activity could be used to discriminate patients with schizophrenia from controls, and would be less able to discriminate non-psychiatric patients from controls.}, + langid = {english}, + file = {/home/src/Offline/Papers/reinertsen et al_2018_multiscale network dynamics between heart rate and locomotor activity are.pdf} +} + +@article{reinertsenReviewPhysiologicalBehavioral2018, + title = {A Review of Physiological and Behavioral Monitoring with Digital Sensors for Neuropsychiatric Illnesses}, + author = {Reinertsen, Erik and Clifford, Gari D.}, + date = {2018-05-15}, + journaltitle = {Physiological measurement}, + shortjournal = {Physiol Meas}, + volume = {39}, + number = {5}, + eprint = {29671754}, + eprinttype = {pmid}, + pages = {05TR01}, + issn = {0967-3334}, + doi = {10.1088/1361-6579/aabf64}, + abstract = {Physiological, behavioral, and psychological changes associated with neuropsychiatric illness are reflected in several related signals, including actigraphy, location, word sentiment, voice tone, social activity, heart rate, and responses to standardized questionnaires. These signals can be passively monitored using sensors in smartphones, wearable accelerometers, Holter monitors, and multimodal sensing approaches that fuse multiple data types. Connection of these devices to the internet has made large scale studies feasible and is enabling a revolution in neuropsychiatric monitoring. Currently, evaluation and diagnosis of neuropsychiatric disorders relies on clinical visits, which are infrequent and out of the context of a patient’s home environment. Moreover, the demand for clinical care far exceeds the supply of providers. The growing prevalence of context-aware and physiologically relevant digital sensors in consumer technology could help address these challenges, enable objective indexing of patient severity, and inform rapid adjustment of treatment in real-time. Here we review recent studies utilizing such sensors in the context of neuropsychiatric illnesses including stress and depression, bipolar disorder, schizophrenia, post traumatic stress disorder, Alzheimer’s disease, and Parkinson’s disease.}, + pmcid = {PMC5995114}, + file = {/home/src/Offline/Papers/reinertsen_clifford_2018_a review of physiological and behavioral monitoring with digital sensors for.pdf} +} + +@article{reinhardt2012salivary, + title = {Salivary Cortisol, Heart Rate, Electrodermal Activity and Subjective Stress Responses to the {{Mannheim Multicomponent Stress Test}} ({{MMST}})}, + author = {Reinhardt, Tatyana and Schmahl, Christian and Wüst, Stefan and Bohus, Martin}, + date = {2012}, + journaltitle = {Psychiatry research}, + shortjournal = {Psychiatry Res.}, + volume = {198}, + number = {1}, + pages = {106--111}, + publisher = {{Elsevier}} +} + +@article{reitan1958validity, + title = {Validity of the {{Trail Making Test}} as an Indicator of Organic Brain Damage}, + author = {Reitan, Ralph M}, + date = {1958}, + journaltitle = {Perceptual and motor skills}, + shortjournal = {Percept. Mot. Skills}, + volume = {8}, + number = {3}, + pages = {271--276}, + publisher = {{SAGE Publications Sage CA: Los Angeles, CA}}, + keywords = {\#nosource} +} + +@article{rethlefsenPrevalenceSpecificGait2017, + title = {Prevalence of Specific Gait Abnormalities in Children with Cerebral Palsy Revisited: Influence of Age, Prior Surgery, and {{Gross Motor Function Classification System}} Level}, + shorttitle = {Prevalence of Specific Gait Abnormalities in Children with Cerebral Palsy Revisited}, + author = {Rethlefsen, Susan A. and Blumstein, Gideon and Kay, Robert M. and Dorey, Frederick and Wren, Tishya A. L.}, + date = {2017}, + journaltitle = {Developmental Medicine \& Child Neurology}, + shortjournal = {Dev. Med. Child Neurol.}, + volume = {59}, + number = {1}, + pages = {79--88}, + issn = {1469-8749}, + doi = {10.1111/dmcn.13205}, + abstract = {Aim To examine the impact of age, surgery, and Gross Motor Function Classification System (GMFCS) level on the prevalence of gait problems in children with cerebral palsy (CP). Method Gait analysis records were retrospectively reviewed for ambulatory patients with CP. Gait abnormalities were identified using physical exam and kinematic data. Relationships among age, sex, previous surgery, GMFCS level, and prevalence of gait abnormalities associated with crouch and out-toeing, and equinus and in-toeing were assessed using univariable and multivariable logistic regression. Results One-thousand and five records were reviewed. The most common gait problems were in-toeing, excessive knee flexion, stiff knee, hip flexion, internal rotation, adduction, and equinus (all {$>$}50\%). Odds ratios (OR) for various gait problems associated with crouch and out-toeing increased (OR 1.07–1.32), and those associated with equinus and in-toeing decreased (OR 0.80–0.94) significantly with increasing age for patients in GMFCS levels I to III. The same trends were seen with prior surgery (OR for crouch and out-toeing: 1.86–7.14; OR for equinus and in-toeing: 0.16–0.59). Interpretation The prevalence of gait abnormalities varies by GMFCS level, but similarities exist among levels. The study results suggest that in younger children, particularly those in GMFCS levels III and IV, treatments for equinus and in-toeing should be undertaken with caution because these problems tend to decrease with age even without orthopedic intervention. Such children may end up with the ‘opposite’ deformities of calcaneal crouch and out-toeing, which tend to increase in prevalence with age.}, + langid = {english}, + file = {/home/src/Offline/Papers/rethlefsen et al_2017_prevalence of specific gait abnormalities in children with cerebral palsy.pdf;/home/cedarprince/Zotero/storage/A2EDTCF7/dmcn.html} +} + +@article{rheeHumanMobilityPatterns, + title = {Human {{Mobility Patterns}} and {{Their Impact}} on {{Routing}} in {{Human-Driven Mobile Networks}}}, + author = {Rhee, Injong and Shin, Minsu and Hong, Seongik and Lee, Kyunghan and Chong, Song}, + pages = {7}, + abstract = {We conduct a statistical study of human mobility using over 1000 hours of GPS traces of human walks involving 44 participants in five different locations, two university campuses, state fair, New York City, and Disney World. Our data reveals statistical features similar to those in what physicists have long called Levy random walks (or Levy walks). These features include heavy-tail distributions of flight lengths and super-diffusive nature of mobility. We find that these tendencies are likely caused by human intentions in deciding travel destinations (and distance and sojourn time thereof), but not by geographical constraints such as roads, buildings, boundaries, etc, and that geographical constraints, instead, cause truncations of flight lengths and discontinuity in the statistical tendency of mobility statistics. Based on these findings, we construct a simple Levy walk mobility model that emulates human walk patterns expected in outdoor mobile networks carried by humans. Based on these findings, we construct a simple Levy walk mobility model that emulates human walk patterns expected in outdoor mobile network environments. We demonstrate that the Levy walk model can be used to recreate the statistical patterns commonly observed in previous mobility studies such as the power-law distributions of human inter-contact times and that the simulation performance of mobile network routing protocols under the Levy walk model exhibits distinctive performance features unexplored under existing mobility models.}, + langid = {english}, + file = {/home/src/Offline/Papers/rhee et al_human mobility patterns and their impact on routing in human-driven mobile.pdf} +} + +@article{rhodesJustintimeInformationRetrieval2000, + title = {Just-in-Time Information Retrieval Agents}, + author = {Rhodes, B. J. and Maes, P.}, + date = {2000}, + journaltitle = {IBM Systems Journal}, + shortjournal = {IBM Syst. J.}, + volume = {39}, + number = {3.4}, + pages = {685--704}, + issn = {0018-8670}, + doi = {10.1147/sj.393.0685}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/rhodes_maes_2000_just-in-time information retrieval agents.pdf} +} + +@article{rhodesRemembranceAgentContinuously, + title = {Remembrance {{Agent}}: {{A Continuously Running Automated Information Retrieval System}}}, + author = {Rhodes, Bradley J and Starner, Thad}, + pages = {4}, + abstract = {The Remembrance Agent (RA) is a program which augmentshumanmemoryby displaying a list of documents which might be relevant to the user’s current context. Unlike most information retrieval systems, the RAruns continuouslywithout user intervention. Its unobtrusive interface allows a user to pursue or ignore the RA’ssuggestions as desired.}, + langid = {english}, + file = {/home/src/Papers/rhodes_starner_remembrance agent.pdf} +} + +@article{richesson2014electronic, + title = {Electronic Health Records-Based Phenotyping}, + author = {Richesson, Rachel and Smerek, Michelle}, + date = {2014}, + journaltitle = {Rethinking clinical trials: A living textbook of pragmatic clinical trials}, + shortjournal = {Rethink. Clin. Trials Living Textb. Pragmatic Clin. Trials}, + volume = {2016}, + file = {/home/src/Papers/richesson_smerek_2014_electronic health records-based phenotyping2.pdf} +} + +@software{rishubaglaHumanDetectionAerial2019, + title = {Human Detection on {{Aerial}} Video. {{Contribute}} to {{RishuBagla}}/{{Object-detection}} Development by Creating an Account on {{GitHub}}}, + author = {RishuBagla}, + date = {2019-03-11T18:34:58Z}, + origdate = {2019-03-11T15:11:52Z}, + url = {https://github.com/RishuBagla/Object-detection}, + urldate = {2019-07-29}, + keywords = {\#nosource} +} + +@article{ritchieDesigningPreventionProgrammes2010, + title = {Designing Prevention Programmes to Reduce Incidence of Dementia: Prospective Cohort Study of Modifiable Risk Factors}, + shorttitle = {Designing Prevention Programmes to Reduce Incidence of Dementia}, + author = {Ritchie, K. and Carriere, I. and Ritchie, C. W. and Berr, C. and Artero, S. and Ancelin, M.-L.}, + date = {2010-08-05}, + journaltitle = {BMJ}, + shortjournal = {BMJ}, + volume = {341}, + pages = {c3885-c3885}, + issn = {0959-8138, 1468-5833}, + doi = {10.1136/bmj.c3885}, + abstract = {Objective To estimate the percentage reduction in incidence of dementia that would be obtained if specific risk factors were eliminated. Design Prospective seven year cohort study. Setting General population, Montpellier, France. Participants 1433 people aged over 65 with a mean baseline age of 72.5 (SD 5.1) years. Main outcome measures Diagnosis of mild cognitive impairment or dementia established by a standardised neurological examination. Results Cox models were constructed to derive hazard ratios and determine confounding and interaction effects for potentially modifiable risk factors for dementia. Mean percentage population attributable fractions were calculated with 95\% confidence intervals derived from bootstrapping for seven year incidence of mild cognitive impairment or dementia. The final model retained crystallised intelligence (population attributable fraction 18.11\%, 95\% confidence interval 10.91\% to 25.42\%), depression (10.31\%, 3.66\% to 17.17\%), fruit and vegetable consumption (6.46\%, 0.15\% to 13.06\%), diabetes (4.88\%, 1.87\% to 7.98\%), and apolipoprotein E ε4 allele (7.11\%, 2.44\% to 11.98\%). Conclusions Increasing crystallised intelligence and fruit and vegetable consumption and eliminating depression and diabetes are likely to have the biggest impact on reducing the incidence of dementia, outweighing even the effect of removing the principal known genetic risk factor. Although causal relations cannot be concluded with certainty, the study suggests priorities that may inform public health programmes.}, + issue = {aug05 2}, + langid = {english}, + file = {/home/src/Offline/Papers/ritchie et al_2010_designing prevention programmes to reduce incidence of dementia.pdf} +} + +@book{robertsGettingHealthReform2008, + title = {Getting {{Health Reform Right}}}, + author = {Roberts, Marc and Hsiao, William and Berman, Peter and Reich, Michael}, + date = {2008-04-17}, + publisher = {{Oxford University Press}}, + doi = {10.1093/acprof:oso/9780195371505.001.0001}, + isbn = {978-0-19-537150-5}, + langid = {english}, + file = {/home/src/Papers/roberts et al_2008_getting health reform right.pdf} +} + +@article{robertson1997oops, + title = {Oops!': Performance Correlates of Everyday Attentional Failures in Traumatic Brain Injured and Normal Subjects}, + author = {Robertson, Ian H and Manly, Tom and Andrade, Jackie and Baddeley, Bart T and Yiend, Jenny}, + date = {1997}, + journaltitle = {Neuropsychologia}, + volume = {35}, + number = {6}, + pages = {747--758}, + publisher = {{Pergamon}} +} + +@article{robinsonMeetEllieMachine, + title = {Meet {{Ellie}}, the Machine That Can Detect Depression}, + author = {Robinson, Ann}, + journaltitle = {The Guardian}, + pages = {3}, + langid = {english}, + keywords = {carnegie-mellon,complab,depression,mental-health}, + file = {/home/src/Offline/Papers/robinson_meet ellie, the machine that can detect depression.pdf} +} + +@article{rocheFreedomChoiceExpressions2018, + title = {Freedom of Choice, Expressions of Gratitude: {{Patient}} Experiences of Short-Term Surgical Missions in {{Guatemala}}}, + shorttitle = {Freedom of Choice, Expressions of Gratitude}, + author = {Roche, Stephanie and Brockington, Morgan and Fathima, Sana and Nandi, Meghna and Silverberg, Benjamin and Rice, Henry E. and Hall-Clifford, Rachel}, + date = {2018-07}, + journaltitle = {Social Science \& Medicine}, + shortjournal = {Social Science \& Medicine}, + volume = {208}, + pages = {117--125}, + issn = {02779536}, + doi = {10.1016/j.socscimed.2018.05.021}, + abstract = {Lack of surgical care has been highlighted as a critical global health problem, and short-term medical missions (STMMs) have become a de facto measure to address this shortfall. Participation in STMMs is an increasingly popular activity for foreign medical professionals to undertake in low- and middle-income countries (LMICs) where their clinical skills may be in short supply. While there is emerging literature on the STMM phenomenon, patient experiences of surgical missions are underrepresented. This research addresses this gap through thirtyseven in-depth interviews with patients or caregivers who received care from a short-term surgical mission within the three years prior to the four-week data collection period in July and August 2013. Interviews were conducted in Antigua, Guatemala and nearby communities, and participants came from 9 different departments of the country. These first-hand accounts of health-seeking through a surgical mission provide important insights into the benefits and challenges of STMMs that patients encounter, including waiting time, ancillary costs, and access to care. Patient agency in care-seeking is considered within the pluralistic, privatized health care context in Guatemala in which foreign participants deliver STMM care.}, + langid = {english}, + file = {/home/src/Offline/Papers/roche et al_2018_freedom of choice, expressions of gratitude.pdf} +} + +@article{rocheMakingSurgicalMissions2015, + title = {Making Surgical Missions a Joint Operation: {{NGO}} Experiences of Visiting Surgical Teams and the Formal Health Care System in {{Guatemala}}}, + shorttitle = {Making Surgical Missions a Joint Operation}, + author = {Roche, Stephanie and Hall-Clifford, Rachel}, + date = {2015-11-26}, + journaltitle = {Global Public Health}, + shortjournal = {Global Public Health}, + volume = {10}, + number = {10}, + pages = {1201--1214}, + issn = {1744-1692, 1744-1706}, + doi = {10.1080/17441692.2015.1011189}, + langid = {english}, + file = {/home/src/Offline/Papers/roche_hall-clifford_2015_making surgical missions a joint operation.pdf} +} + +@article{rodriguezSCALEASSESSMENTNEGATIVE, + title = {{{SCALE FOR THE ASSESSMENT OF NEGATIVE SYMPTOMS}}}, + author = {Rodriguez, Rose}, + pages = {11}, + langid = {english}, + keywords = {schizophrenia}, + file = {/home/src/Offline/Papers/rodriguez_scale for the assessment of negative symptoms.pdf} +} + +@article{roediger2011test, + title = {Test-Enhanced Learning in the Classroom: Long-Term Improvements from Quizzing.}, + author = {Roediger III, Henry L and Agarwal, Pooja K and McDaniel, Mark A and McDermott, Kathleen B}, + date = {2011}, + journaltitle = {Journal of Experimental Psychology: Applied}, + shortjournal = {J. Exp. Psychol. Appl.}, + volume = {17}, + number = {4}, + pages = {382}, + publisher = {{American Psychological Association}} +} + +@misc{rohloffDevelopmentSmallHealth, + title = {Beyond {{Development}}, {{Small Health Care NGOs}}}, + author = {Rohloff, Peter}, + file = {/home/src/Offline/Papers/rohloff_beyond development, small health care ngos.pdf} +} + +@article{rohrerThinkingClearlyCorrelations, + title = {Thinking {{Clearly About Correlations}} and {{Causation}}: {{Graphical Causal Models}} for {{Observational Data}}}, + author = {Rohrer, Julia M}, + pages = {16}, + abstract = {Correlation does not imply causation; but often, observational data are the only option, even though the research question at hand involves causality. This article discusses causal inference based on observational data, introducing readers to graphical causal models that can provide a powerful tool for thinking more clearly about the interrelations between variables. Topics covered include the rationale behind the statistical control of third variables, common procedures for statistical control, and what can go wrong during their implementation. Certain types of third variables—colliders and mediators—should not be controlled for because that can actually move the estimate of an association away from the value of the causal effect of interest. More subtle variations of such harmful control include using unrepresentative samples, which can undermine the validity of causal conclusions, and statistically controlling for mediators. Drawing valid causal inferences on the basis of observational data is not a mechanistic procedure but rather always depends on assumptions that require domain knowledge and that can be more or less plausible. However, this caveat holds not only for research based on observational data, but for all empirical research endeavors.}, + langid = {english}, + file = {/home/src/Offline/Papers/rohrer_thinking clearly about correlations and causation.pdf} +} + +@article{ronald2006genetic, + title = {Genetic Heterogeneity between the Three Components of the Autism Spectrum: A Twin Study}, + author = {Ronald, Angelica and Happé, Francesca and Bolton, Patrick and Butcher, Lee M and Price, Thomas S and Wheelwright, Sally and Baron-Cohen, Simon and Plomin, Robert}, + date = {2006}, + journaltitle = {Journal of the American Academy of Child \& Adolescent Psychiatry}, + shortjournal = {J. Am. Acad. Child Adolesc. Psychiatry}, + volume = {45}, + number = {6}, + pages = {691--699}, + publisher = {{Elsevier}} +} + +@article{rosen1981rosen, + title = {The Rosen Drawing Test}, + author = {Rosen, W}, + date = {1981}, + journaltitle = {Bronx, NY: Veterans Administration Medical Center}, + shortjournal = {Bronx NY Veterans Adm. Med. Cent.}, + keywords = {\#nosource} +} + +@article{rosen1984new, + title = {A New Rating Scale for {{Alzheimer}}'s Disease.}, + author = {Rosen, Wilma G and Mohs, Richard C and Davis, Kenneth L}, + date = {1984}, + journaltitle = {The American journal of psychiatry}, + shortjournal = {Am. J. Psychiatry}, + publisher = {{American Psychiatric Assn}}, + keywords = {\#nosource} +} + +@article{rosenberg2009characteristics, + title = {Characteristics and Concordance of Autism Spectrum Disorders among 277 Twin Pairs}, + author = {Rosenberg, Rebecca E and Law, J Kiely and Yenokyan, Gayane and McGready, John and Kaufmann, Walter E and Law, Paul A}, + date = {2009}, + journaltitle = {Archives of pediatrics \& adolescent medicine}, + shortjournal = {Arch. Pediatr. Adolesc. Med.}, + volume = {163}, + number = {10}, + pages = {907--914}, + publisher = {{American Medical Association}} +} + +@book{rosenDiscreteMathematicsIts2019, + title = {Discrete Mathematics and Its Applications}, + author = {Rosen, Kenneth H.}, + date = {2019}, + edition = {Eighth edition}, + publisher = {{McGraw-Hill}}, + location = {{New York, NY}}, + isbn = {978-1-259-67651-2}, + langid = {english}, + pagetotal = {942}, + keywords = {Computer science,Mathematics}, + file = {/home/src/Papers/rosen_2019_discrete mathematics and its applications.pdf} +} + +@article{rosnerWilcoxonSignedRank2006, + title = {The {{Wilcoxon Signed Rank Test}} for {{Paired Comparisons}} of {{Clustered Data}}}, + author = {Rosner, Bernard and Glynn, Robert J. and Lee, Mei-Ling T.}, + date = {2006}, + journaltitle = {Biometrics}, + volume = {62}, + number = {1}, + pages = {185--192}, + issn = {1541-0420}, + doi = {10.1111/j.1541-0420.2005.00389.x}, + abstract = {The Wilcoxon signed rank test is a frequently used nonparametric test for paired data (e.g., consisting of pre- and posttreatment measurements) based on independent units of analysis. This test cannot be used for paired comparisons arising from clustered data (e.g., if paired comparisons are available for each of two eyes of an individual). To incorporate clustering, a generalization of the randomization test formulation for the signed rank test is proposed, where the unit of randomization is at the cluster level (e.g., person), while the individual paired units of analysis are at the subunit within cluster level (e.g., eye within person). An adjusted variance estimate of the signed rank test statistic is then derived, which can be used for either balanced (same number of subunits per cluster) or unbalanced (different number of subunits per cluster) data, with an exchangeable correlation structure, with or without tied values. The resulting test statistic is shown to be asymptotically normal as the number of clusters becomes large, if the cluster size is bounded. Simulation studies are performed based on simulating correlated ranked data from a signed log-normal distribution. These studies indicate appropriate type I error for data sets with ≥20 clusters and a superior power profile compared with either the ordinary signed rank test based on the average cluster difference score or the multivariate signed rank test of Puri and Sen (1971, Nonparametric Methods in Multivariate Analysis, New York: John Wiley). Finally, the methods are illustrated with two data sets, (i) an ophthalmologic data set involving a comparison of electroretinogram (ERG) data in retinitis pigmentosa (RP) patients before and after undergoing an experimental surgical procedure, and (ii) a nutritional data set based on a randomized prospective study of nutritional supplements in RP patients where vitamin E intake outside of study capsules is compared before and after randomization to monitor compliance with nutritional protocols.}, + langid = {english}, + keywords = {Clustered data,Nonparametric tests,Ophthalmologic data,Paired data}, + annotation = {\_eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1541-0420.2005.00389.x}, + file = {/home/src/Papers/rosner et al_2006_the wilcoxon signed rank test for paired comparisons of clustered data.pdf;/home/cedarprince/Zotero/storage/Q3K65QDI/j.1541-0420.2005.00389.html} +} + +@article{rossEffectsBreaksGoal2014, + title = {Effects of Breaks and Goal Switches on the Vigilance Decrement}, + author = {Ross, Hayden A. and Russell, Paul N. and Helton, William S.}, + date = {2014-06}, + journaltitle = {Experimental Brain Research}, + shortjournal = {Exp Brain Res}, + volume = {232}, + number = {6}, + pages = {1729--1737}, + issn = {0014-4819, 1432-1106}, + doi = {10.1007/s00221-014-3865-5}, + abstract = {In this report, we examined the impact of rest breaks and goal switches on the vigilance decrement—the change in performance with time-on-task—and subjective stress and workload. In study 1, we examined the decrement in a visual line-length discrimination task employed in previous research. The task had a linear decrement in perceptual sensitivity with time-on-task based on the results of a trend analysis (orthogonal polynomial contrasts). In addition, the task had a profile of self-reported stress and workload similar to other moderately demanding vigilance tasks. In study 2, we examined the decrement in the same task with the factorial inclusion of rest breaks and goal switches late in the task. The inclusion of rest breaks resulted in a significant cubic trend in perceptual sensitivity. After the first rest break, there was a reversal of the linear downward decrement in perceptual sensitivity, but the second rest break did not elicit this change. The inclusion of goal switches did not cause any significant deviation from the linear trend and did not attenuate the decrement. In addition, the inclusion of rest breaks resulted in reduced self-reported effort and temporal demand. The results of the present study cohere with the expectations of a resource depletion account of the vigilance decrement.}, + langid = {english}, + file = {/home/src/Offline/Papers/ross et al_2014_effects of breaks and goal switches on the vigilance decrement.pdf} +} + +@book{roughgardenAlgorithmsIlluminatedPart2017, + title = {Algorithms Illuminated. {{Part}} 1: {{The Basics}}}, + shorttitle = {Algorithms Illuminated. {{Part}} 1}, + author = {Roughgarden, Tim}, + date = {2017}, + publisher = {{Soundlikeyourself Publishing}}, + location = {{San Francisco, CA}}, + isbn = {978-0-9992829-0-8}, + langid = {english}, + annotation = {OCLC: 1057268303}, + file = {/home/src/Papers/roughgarden_2017_algorithms illuminated.pdf} +} + +@article{rylko-bauerReclaimingAppliedAnthropology2006, + title = {Reclaiming {{Applied Anthropology}}: {{Its Past}}, {{Present}}, and {{Future}}}, + shorttitle = {Reclaiming {{Applied Anthropology}}}, + author = {Rylko-Bauer, Barbara and Singer, Merrill and Willigen, John Van}, + date = {2006-03}, + journaltitle = {American Anthropologist}, + shortjournal = {American Anthropologist}, + volume = {108}, + number = {1}, + pages = {178--190}, + issn = {0002-7294, 1548-1433}, + doi = {10.1525/aa.2006.108.1.178}, + langid = {english}, + file = {/home/src/Offline/Papers/rylko-bauer et al_2006_reclaiming applied anthropology.pdf} +} + +@article{sachdevPrevalenceMildCognitive2015, + title = {The {{Prevalence}} of {{Mild Cognitive Impairment}} in {{Diverse Geographical}} and {{Ethnocultural Regions}}: {{The COSMIC Collaboration}}}, + shorttitle = {The {{Prevalence}} of {{Mild Cognitive Impairment}} in {{Diverse Geographical}} and {{Ethnocultural Regions}}}, + author = {Sachdev, Perminder S. and Lipnicki, Darren M. and Kochan, Nicole A. and Crawford, John D. and Thalamuthu, Anbupalam and Andrews, Gavin and Brayne, Carol and Matthews, Fiona E. and Stephan, Blossom C. M. and Lipton, Richard B. and Katz, Mindy J. and Ritchie, Karen and Carrière, Isabelle and Ancelin, Marie-Laure and Lam, Linda C. W. and Wong, Candy H. Y. and Fung, Ada W. T. and Guaita, Antonio and Vaccaro, Roberta and Davin, Annalisa and Ganguli, Mary and Dodge, Hiroko and Hughes, Tiffany and Anstey, Kaarin J. and Cherbuin, Nicolas and Butterworth, Peter and Ng, Tze Pin and Gao, Qi and Reppermund, Simone and Brodaty, Henry and Schupf, Nicole and Manly, Jennifer and Stern, Yaakov and Lobo, Antonio and Lopez-Anton, Raúl and Santabárbara, Javier and {Cohort Studies of Memory in an International Consortium (COSMIC)}}, + editor = {Arendt, Thomas}, + date = {2015-11-05}, + journaltitle = {PLOS ONE}, + shortjournal = {PLoS ONE}, + volume = {10}, + number = {11}, + pages = {e0142388}, + issn = {1932-6203}, + doi = {10.1371/journal.pone.0142388}, + abstract = {Background Changes in criteria and differences in populations studied and methodology have produced a wide range of prevalence estimates for mild cognitive impairment (MCI). Methods Uniform criteria were applied to harmonized data from 11 studies from USA, Europe, Asia and Australia, and MCI prevalence estimates determined using three separate definitions of cognitive impairment. Results The published range of MCI prevalence estimates was 5.0\%–36.7\%. This was reduced with all cognitive impairment definitions: performance in the bottom 6.681\% (3.2\%–10.8\%); Clinical Dementia Rating of 0.5 (1.8\%–14.9\%); Mini-Mental State Examination score of 24–27 (2.1\%–20.7\%). Prevalences using the first definition were 5.9\% overall, and increased with age (P {$<$} .001) but were unaffected by sex or the main races/ethnicities investigated (Whites and Chinese). Not completing high school increased the likelihood of MCI (P .01). Conclusion Applying uniform criteria to harmonized data greatly reduced the variation in MCI prevalence internationally.}, + langid = {english}, + file = {/home/src/Offline/Papers/sachdev et al_2015_the prevalence of mild cognitive impairment in diverse geographical and.pdf} +} + +@article{sachdevSydneyMemoryAgeing2010, + title = {The {{Sydney Memory}} and {{Ageing Study}} ({{MAS}}): Methodology and Baseline Medical and Neuropsychiatric Characteristics of an Elderly Epidemiological Non-Demented Cohort of {{Australians}} Aged 70–90 Years}, + shorttitle = {The {{Sydney Memory}} and {{Ageing Study}} ({{MAS}})}, + author = {Sachdev, Perminder S. and Brodaty, Henry and Reppermund, Simone and Kochan, Nicole A. and Trollor, Julian N. and Draper, Brian and Slavin, Melissa J. and Crawford, John and Kang, Kristan and Broe, G. Anthony and Mather, Karen A. and Lux, Ora and {the Memory and Ageing Study Team}}, + date = {2010-12}, + journaltitle = {International Psychogeriatrics}, + shortjournal = {Int. Psychogeriatr.}, + volume = {22}, + number = {8}, + pages = {1248--1264}, + issn = {1041-6102, 1741-203X}, + doi = {10.1017/S1041610210001067}, + abstract = {Background: The Sydney Memory and Ageing Study (Sydney MAS) was initiated in 2005 to examine the clinical characteristics and prevalence of mild cognitive impairment (MCI) and related syndromes, and to determine the rate of change in cognitive function over time. Methods: Non-demented community-dwelling individuals (N = 1037) aged 70–90 were recruited from two areas of Sydney, following a random approach to 8914 individuals on the electoral roll. They underwent detailed neuropsychiatric and medical assessments and donated a blood sample for clinical chemistry, proteomics and genomics. A knowledgeable informant was also interviewed. Structural MRI scans were performed on 554 individuals, and subgroups participated in studies of falls and balance, metabolic and inflammatory markers, functional MRI and prospective memory. The cohort is to be followed up with brief telephone reviews annually, and detailed assessments biannually. Results: This is a generally well-functioning cohort mostly living in private homes and rating their health as being better than average, although vascular risk factors are common. Most (95.5\%) participants or their informants identified a cognitive difficulty, and 43.5\% had impairment on at least one neuropsychological test. MCI criteria were met by 34.8\%; with19.3\% qualifying for amnestic MCI, whereas 15.5\% had non-amnestic MCI; 1.6\% had impairment on neuropsychological test performance but no subjective complaints; and 5.8\% could not be classified. The rate of MCI was 30.9\% in the youngest (70–75) and 39.1\% in the oldest (85–90) age bands. Rates of depression and anxiety were 7.1\% and 6.9\% respectively. Conclusions: Cognitive complaints are common in the elderly, and nearly one in three meet criteria for MCI. Longitudinal follow-up of this cohort will delineate the progression of complaints and objective cognitive impairment, and the determinants of such change.}, + langid = {english}, + file = {/home/src/Offline/Papers/sachdev et al_2010_the sydney memory and ageing study (mas).pdf} +} + +@article{sacks2015introduction, + title = {Introduction of Mobile Health Tools to Support {{Ebola}} Surveillance and Contact Tracing in {{Guinea}}}, + author = {Sacks, Jilian A and Zehe, Elizabeth and Redick, Cindil and Bah, Alhoussaine and Cowger, Kai and Camara, Mamady and Diallo, Aboubacar and Gigo, Abdel Nasser Iro and Dhillon, Ranu S and Liu, Anne}, + date = {2015}, + journaltitle = {Global Health: Science and Practice}, + shortjournal = {Glob. Health Sci. Pract.}, + volume = {3}, + number = {4}, + pages = {646--659}, + publisher = {{Global Health: Science and Practice}} +} + +@article{saeb2015mobile, + title = {Mobile Phone Sensor Correlates of Depressive Symptom Severity in Daily-Life Behavior: An Exploratory Study}, + author = {Saeb, Sohrab and Zhang, Mi and Karr, Christopher J and Schueller, Stephen M and Corden, Marya E and Kording, Konrad P and Mohr, David C}, + date = {2015}, + journaltitle = {Journal of medical Internet research}, + shortjournal = {J. Med. Internet Res.}, + volume = {17}, + number = {7}, + pages = {e175}, + publisher = {{JMIR Publications Inc., Toronto, Canada}}, + keywords = {\#nosource} +} + +@article{sagiEnsembleLearningSurvey2018, + title = {Ensemble Learning: {{A}} Survey}, + shorttitle = {Ensemble Learning}, + author = {Sagi, Omer and Rokach, Lior}, + date = {2018-07}, + journaltitle = {Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery}, + shortjournal = {WIREs Data Mining Knowl Discov}, + volume = {8}, + number = {4}, + pages = {e1249}, + issn = {19424787}, + doi = {10.1002/widm.1249}, + langid = {english}, + file = {/home/src/Offline/Papers/sagi_rokach_2018_ensemble learning.pdf} +} + +@inproceedings{sakoglu2009dynamic, + title = {Dynamic Windowing Reveals Task-Modulation of Functional Connectivity in Schizophrenia Patients vs Healthy Controls}, + booktitle = {Proc. {{Intl}}. {{Soc}}. {{Mag}}. {{Reson}}. {{Med}}}, + author = {Sakoglu, U and Calhoun, VD}, + date = {2009}, + volume = {17}, + pages = {3675} +} + +@article{salernoLGBTQPopulationsPsychologically, + title = {{{LGBTQ Populations}}: {{Psychologically Vulnerable Communities}} in the {{COVID-19 Pandemic}}}, + author = {Salerno, John P and Williams, Natasha D and Gattamorta, Karina A}, + pages = {4}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/M5H3TZ6F/Salerno et al_LGBTQ Populations.pdf} +} + +@article{salmoni1984knowledge, + title = {Knowledge of Results and Motor Learning: A Review and Critical Reappraisal.}, + author = {Salmoni, Alan W and Schmidt, Richard A and Walter, Charles B}, + date = {1984}, + journaltitle = {Psychological bulletin}, + shortjournal = {Psychol. Bull.}, + volume = {95}, + number = {3}, + pages = {355}, + publisher = {{American Psychological Association}} +} + +@online{saneaustraliaSelfharm2019, + title = {Self-Harm}, + author = {{SANE Australia}}, + date = {2019}, + url = {https://www.sane.org/information-stories/facts-and-guides/self-harm}, + urldate = {2020-06-16} +} + +@article{sankarBiopolymerreinforcedSyntheticGranular2013, + title = {Biopolymer-Reinforced Synthetic Granular Nanocomposites for Affordable Point-of-Use Water Purification}, + author = {Sankar, Mohan Udhaya and Aigal, Sahaja and Chaudhary, Amrita and {Anshup} and Kumar, Avula Anil and Chaudhari, Kamalesh and Pradeep, Thalappil}, + date = {2013-05-06}, + journaltitle = {Proceedings of the National Academy of Sciences of the United States}, + shortjournal = {PNAS}, + volume = {110}, + number = {21}, + doi = {10.1073/pnas. 1220222110}, + keywords = {Filtration,India,Inexpensive,Nanoparticle,Silver,Water}, + file = {/home/src/Offline/Papers/sankar et al_2013_biopolymer-reinforced synthetic granular nanocomposites for affordable.pdf;/home/cedarprince/Zotero/storage/8822M8GD/8459.html} +} + +@article{sanoAutonomicSleepPatterns, + title = {Autonomic {{Sleep Patterns}} in {{Children}} with {{Autism Spectrum Disorders}}}, + author = {Sano, Akane and Picard, Rosalind and Malow, Beth and Goldman, Suzanne}, + pages = {1}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/AFCMRJ4F/Sano et al. - Autonomic Sleep Patterns in Children with Autism S.pdf} +} + +@misc{sanoStressRecognitionUsing2013, + title = {Stress {{Recognition Using Wearable Sensors}} and {{Mobile Phones}}}, + author = {Sano, Akane and Picard, Rosalind}, + date = {2013}, + publisher = {{Humaine Association Conference on Affective Computing and Intelligent Interaction}}, + file = {/home/cedarprince/Zotero/storage/NVIYL97K/Sano-et-al.-2013-Stress-recognition-using-wearable-sensors-and-mobile-phones.pdf} +} + +@inproceedings{sanoStressRecognitionUsing2013a, + title = {Stress {{Recognition Using Wearable Sensors}} and {{Mobile Phones}}}, + booktitle = {2013 {{Humaine Association Conference}} on {{Affective Computing}} and {{Intelligent Interaction}}}, + author = {Sano, Akane and Picard, Rosalind W.}, + date = {2013-09}, + pages = {671--676}, + publisher = {{IEEE}}, + location = {{Geneva, Switzerland}}, + doi = {10.1109/ACII.2013.117}, + abstract = {In this study, we aim to find physiological or behavioral markers for stress. We collected 5 days of data for 18 participants: a wrist sensor (accelerometer and skin conductance), mobile phone usage (call, short message service, location and screen on/off) and surveys (stress, mood, sleep, tiredness, general health, alcohol or caffeinated beverage intake and electronics usage). We applied correlation analysis to find statistically significant features associated with stress and used machine learning to classify whether the participants were stressed or not. In comparison to a baseline 87.5\% accuracy using the surveys, our results showed over 75\% accuracy in a binary classification using screen on, mobility, call or activity level information (some showed higher accuracy than the baseline). The correlation analysis showed that the higherreported stress level was related to activity level, SMS and screen on/off patterns.}, + eventtitle = {2013 {{Humaine Association Conference}} on {{Affective Computing}} and {{Intelligent Interaction}} ({{ACII}})}, + isbn = {978-0-7695-5048-0}, + langid = {english}, + file = {/home/src/Offline/Papers/sano_picard_2013_stress recognition using wearable sensors and mobile phones.pdf} +} + +@incollection{sapolsky1993endocrinology, + title = {Endocrinology Alfresco: Psychoendocrine Studies of Wild Baboons}, + booktitle = {Recent Progress in Hormone Research}, + author = {Sapolsky, Robert M}, + date = {1993}, + pages = {437--468}, + publisher = {{Elsevier}} +} + +@incollection{sarason1988social, + title = {Social Support, Personality, and Health}, + booktitle = {Individual Differences, Stress, and Health Psychology}, + author = {Sarason, Irwin G}, + date = {1988}, + pages = {109--128}, + publisher = {{Springer}} +} + +@article{sarkarPerformanceIntensiveCare2021, + title = {Performance of Intensive Care Unit Severity Scoring Systems across Different Ethnicities in the {{USA}}: A Retrospective Observational Study}, + shorttitle = {Performance of Intensive Care Unit Severity Scoring Systems across Different Ethnicities in the {{USA}}}, + author = {Sarkar, Rahuldeb and Martin, Christopher and Mattie, Heather and Gichoya, Judy Wawira and Stone, David J and Celi, Leo Anthony}, + date = {2021-04}, + journaltitle = {The Lancet Digital Health}, + shortjournal = {The Lancet Digital Health}, + volume = {3}, + number = {4}, + pages = {e241-e249}, + issn = {25897500}, + doi = {10.1016/S2589-7500(21)00022-4}, + abstract = {Background Despite wide use of severity scoring systems for case-mix determination and benchmarking in the intensive care unit (ICU), the possibility of scoring bias across ethnicities has not been examined. Guidelines on the use of illness severity scores to inform triage decisions for allocation of scarce resources, such as mechanical ventilation, during the current COVID-19 pandemic warrant examination for possible bias in these models. We investigated the performance of the severity scoring systems Acute Physiology and Chronic Health Evaluation IVa (APACHE IVa), Oxford Acute Severity of Illness Score (OASIS), and Sequential Organ Failure Assessment (SOFA) across four ethnicities in two large ICU databases to identify possible ethnicity-based bias.}, + langid = {english}, + file = {/Users/jzelko3/Knowledgebase/Papers/Sarkar et al_2021_Performance of intensive care unit severity scoring systems across different.pdf} +} + +@article{savard2013relationship, + title = {Relationship between Objectively Recorded Hot Flashes and Sleep Disturbances among Breast Cancer Patients: Investigating Hot Flash Characteristics Other than Frequency}, + author = {Savard, Marie-Hélène and Savard, Josée and Caplette-Gingras, Aude and Ivers, Hans and Bastien, Célyne}, + date = {2013}, + journaltitle = {Menopause}, + volume = {20}, + number = {10}, + pages = {997--1005}, + publisher = {{LWW}} +} + +@article{scale1987psychological, + title = {The Psychological Corporation}, + author = {Scale-Revised, Wechsler D Wechsler Memory}, + date = {1987}, + journaltitle = {New York}, + shortjournal = {N. Y.}, + keywords = {\#nosource} +} + +@book{schaefferArtBible2009, + title = {Art and the {{Bible}}.}, + author = {Schaeffer, Francis A}, + date = {2009}, + publisher = {{InterVarsity Press}}, + location = {{Downers Grove}}, + url = {http://qut.eblib.com.au/patron/FullRecord.aspx?p=2007071}, + urldate = {2021-01-17}, + abstract = {"The lordship of Christ should include an interest in the arts," writes Francis Schaeffer. "A Christian should use these arts to the glory of God, not just as tracts, mind you, but as things of beauty to the praise of God." Many Christians, wary of creating graven images, have steered clear of artistic creativity. But the Bible offers a robust affirmation of the arts. The human impulse to create reflects our being created in the image of a creator God. Art and the Bible has been a foundational work for generations of Christians in the arts. In this book's classic essays, Francis Schaeffer first examines the scriptural record of the use of various art forms, and then establishes a Christian perspective on art. With clarity and vigor, Schaeffer explains why "the Christian is the one whose imagination should fly beyond the stars."}, + isbn = {978-0-8308-7444-6}, + langid = {english}, + annotation = {OCLC: 1043360408}, + file = {/home/src/Papers/schaeffer_2009_art and the bible.pdf} +} + +@article{schafer2016epi, + title = {The {{Epi Info Viral Hemorrhagic Fever}} ({{VHF}}) Application: A Resource for Outbreak Data Management and Contact Tracing in the 2014–2016 {{West Africa Ebola}} Epidemic}, + author = {Schafer, Ilana J and Knudsen, Erik and McNamara, Lucy A and Agnihotri, Sachin and Rollin, Pierre E and Islam, Asad}, + date = {2016}, + journaltitle = {The Journal of infectious diseases}, + shortjournal = {J. Infect. Dis.}, + volume = {214}, + pages = {S122--S136}, + publisher = {{Oxford University Press}}, + issue = {suppl\_3} +} + +@article{schistermanOveradjustmentBiasUnnecessary2009, + title = {Overadjustment {{Bias}} and {{Unnecessary Adjustment}} in {{Epidemiologic Studies}}}, + shorttitle = {Overadjustment {{Bias}} and {{Unnecessary Adjustment}} in {{Epidemiologic Studies}}}, + author = {Schisterman, Enrique F. and Cole, Stephen R. and Platt, Robert W.}, + date = {2009-07}, + journaltitle = {Epidemiology}, + shortjournal = {Epidemiology}, + volume = {20}, + number = {4}, + pages = {488--495}, + issn = {1044-3983}, + doi = {10.1097/EDE.0b013e3181a819a1}, + langid = {english}, + file = {/home/src/Offline/Papers/schisterman et al_2009_overadjustment bias and unnecessary adjustment in epidemiologic studies.pdf} +} + +@article{schmidtNiklasLuhmannCard2018, + title = {Niklas {{Luhmann}}’s {{Card Index}}: {{The Fabrication}} of {{Serendipity}}}, + shorttitle = {Niklas {{Luhmann}}’s {{Card Index}}}, + author = {Schmidt, Johannes F.K.}, + date = {2018-07-26}, + journaltitle = {Sociologica}, + volume = {Vol 12}, + pages = {53-60 Pages}, + publisher = {{Sociologica}}, + doi = {10.6092/ISSN.1971-8853/8350}, + langid = {english}, + file = {/home/src/Offline/Papers/schmidt_2018_niklas luhmann’s card index.pdf} +} + +@article{schulenberg2017monitoring, + title = {Monitoring the {{Future}} National Survey Results on Drug Use, 1975-2016: {{Volume II}}, {{College}} Students and Adults Ages 19-55}, + author = {Schulenberg, John E and Johnston, Lloyd D and O'Malley, Patrick M and Bachman, Jerald G and Miech, Richard A and Patrick, Megan E}, + date = {2017}, + publisher = {{Institute for Social Research, The University of Michigan}} +} + +@book{sebastianleitnerLerntManLernen1972, + title = {So Lernt Man Lernen: {{Aangewandte Lernpsychologie}} - Ein {{Weg}} Zum {{Erfolg}}}, + author = {{Sebastian Leitner}}, + date = {1972}, + publisher = {{Verlag Herder}}, + location = {{Freiburg im Breisgau}} +} + +@article{sehulster1989content, + title = {Content and Temporal Structure of Autobiographical Knowledge: {{Remembering}} Twenty-Five Seasons at the {{Metropolitan Opera}}}, + author = {Sehulster, Jerome R}, + date = {1989}, + journaltitle = {Memory \& Cognition}, + shortjournal = {Mem. Cognit.}, + volume = {17}, + number = {5}, + pages = {590--606}, + publisher = {{Springer}} +} + +@article{seidl2014niklas, + title = {Niklas {{Luhmann}} as Organization Theorist}, + author = {Seidl, David and Mormann, Hannah}, + date = {2014}, + journaltitle = {The Oxford handbook of sociology, social theory, and organization studies: Contemporary currents}, + shortjournal = {Oxf. Handb. Sociol. Soc. Theory Organ. Stud. Contemp. Curr.}, + pages = {125--157}, + publisher = {{Oxford University Press Oxford}} +} + +@article{selles2010growth, + title = {Growth Diagrams for Grip Strength in Children}, + author = {Selles, Ruud W and Zuidam, J Michiel and Willemsen, Sten P and Stam, Henk J and Hovius, Steven ER and others}, + date = {2010}, + journaltitle = {Clinical Orthopaedics and Related Research®}, + shortjournal = {Clin. Orthop. Relat. Res.}, + volume = {468}, + number = {1}, + pages = {217}, + publisher = {{Springer}} +} + +@online{SexOffendersGroom, + title = {Sex {{Offenders Groom Churches Too}} | {{Christianity Today}}}, + url = {https://www.christianitytoday.com/ct/2018/june-web-only/sex-offenders-groom-churches-too.html?share}, + urldate = {2018-07-24}, + file = {/home/cedarprince/Zotero/storage/TK32U5FU/sex-offenders-groom-churches-too.html} +} + +@article{shade2003weborexics, + title = {Weborexics: {{The}} Ethical Issues Surrounding pro-Ana Websites}, + author = {Shade, Leslie Regan}, + date = {2003}, + journaltitle = {Acm Sigcas Computers and Society}, + shortjournal = {Acm Sigcas Comput. Soc.}, + volume = {33}, + number = {4}, + pages = {2}, + publisher = {{ACM New York, NY, USA}} +} + +@article{shakespeare1991othello, + title = {Othello:[1622]}, + author = {Shakespeare, William and others}, + date = {1991}, + journaltitle = {Oxford Text Archive Core Collection}, + shortjournal = {Oxf. Text Arch. Core Collect.}, + publisher = {{University of Oxford}} +} + +@book{shallice1988neuropsychology, + title = {From Neuropsychology to Mental Structure}, + author = {Shallice, Tim}, + date = {1988}, + publisher = {{Cambridge University Press}} +} + +@article{shaughnessy1977long, + title = {Long-Term Retention and the Spacing Effect in Free-Recall and Frequency Judgments}, + author = {Shaughnessy, John J}, + date = {1977}, + journaltitle = {The American Journal of Psychology}, + shortjournal = {Am. J. Psychol.}, + pages = {587--598}, + publisher = {{JSTOR}} +} + +@report{shawPilotProjectSystem, + type = {Commentary}, + title = {From Pilot Project to System Solution: Innovation, Spread and Scale for Health System Leaders}, + author = {Shaw, James and Tepper, Joshua and Martin, Danielle}, + institution = {{British Medical Journal}}, + file = {/home/src/Offline/Papers/shaw et al_from pilot project to system solution.pdf} +} + +@article{shcherbina2017accuracy, + title = {Accuracy in Wrist-Worn, Sensor-Based Measurements of Heart Rate and Energy Expenditure in a Diverse Cohort}, + author = {Shcherbina, Anna and Mattsson, C Mikael and Waggott, Daryl and Salisbury, Heidi and Christle, Jeffrey W and Hastie, Trevor and Wheeler, Matthew T and Ashley, Euan A}, + date = {2017}, + journaltitle = {Journal of personalized medicine}, + shortjournal = {J. Pers. Med.}, + volume = {7}, + number = {2}, + pages = {3}, + publisher = {{Multidisciplinary Digital Publishing Institute}} +} + +@article{shea1979contextual, + title = {Contextual Interference Effects on the Acquisition, Retention, and Transfer of a Motor Skill.}, + author = {Shea, John B and Morgan, Robyn L}, + date = {1979}, + journaltitle = {Journal of Experimental psychology: Human Learning and memory}, + shortjournal = {J. Exp. Psychol. [Hum. Learn.]}, + volume = {5}, + number = {2}, + pages = {179}, + publisher = {{American Psychological Association}} +} + +@article{sheikhGeriatricDepressionScale1986, + title = {Geriatric Depression Scale ({{GDS}}); Recent Evidence and Development of a Shorter Version. {{Gerontologist}}}, + author = {Sheikh, JL and Yesavage, JA}, + date = {1986}, + volume = {5}, + pages = {165--173}, + keywords = {\#nosource} +} + +@article{shi2020covid, + title = {{{COVID-19}} Infection: The Perspectives on Immune Responses}, + author = {Shi, Yufang and Wang, Ying and Shao, Changshun and Huang, Jianan and Gan, Jianhe and Huang, Xiaoping and Bucci, Enrico and Piacentini, Mauro and Ippolito, Giuseppe and Melino, Gerry}, + date = {2020}, + publisher = {{Nature Publishing Group}} +} + +@article{shih2002problems, + title = {Problems in Dealing with Missing Data and Informative Censoring in Clinical Trials}, + author = {Shih, Weichung Joseph}, + date = {2002}, + journaltitle = {Current controlled trials in cardiovascular medicine}, + shortjournal = {Curr. Control. Trials Cardiovasc. Med.}, + volume = {3}, + number = {1}, + pages = {1--7}, + publisher = {{BioMed Central}} +} + +@article{shimSocialDeterminantsMental2014, + title = {The {{Social Determinants}} of {{Mental Health}}: {{An Overview}} and {{Call}} to {{Action}}}, + shorttitle = {The {{Social Determinants}} of {{Mental Health}}}, + author = {Shim, Ruth and Koplan, Carol and Langheim, Frederick J. P. and Manseau, Marc W. and Powers, Rebecca A. and Compton, Michael T.}, + date = {2014-01}, + journaltitle = {Psychiatric Annals}, + shortjournal = {Psychiatr. Ann.}, + volume = {44}, + number = {1}, + pages = {22--26}, + publisher = {{SLACK Incorporated}}, + doi = {10.3928/00485713-20140108-04} +} + +@book{shiVulnerablePopulationsUnited2021, + title = {Vulnerable Populations in the {{United States}}}, + author = {Shi, Leiyu and Stevens, Gregory D.}, + date = {2021}, + publisher = {{John Wiley \& Sons}}, + isbn = {1-119-62767-2} +} + +@article{shovalUseAdvancedTracking2008, + title = {The Use of Advanced Tracking Technologies for the Analysis of Mobility in {{Alzheimer}}'s Disease and Related Cognitive Diseases}, + author = {Shoval, Noam and Auslander, Gail K and Freytag, Tim and Landau, Ruth and Oswald, Frank and Seidl, Ulrich and Wahl, Hans-Werner and Werner, Shirli and Heinik, Jeremia}, + date = {2008-12}, + journaltitle = {BMC Geriatrics}, + shortjournal = {BMC Geriatr}, + volume = {8}, + number = {1}, + pages = {7}, + issn = {1471-2318}, + doi = {10.1186/1471-2318-8-7}, + abstract = {Background: One of the more common behavioral manifestations of dementia-related disorders is severe problems with out-of-home mobility. Various efforts have been attempted to attain a better understanding of mobility behavior, but most studies are based on institutionalized patients and the assessment usually relies on reports of caregivers and institutional staff, using observational approaches, activity monitoring, or behavioral checklists. The current manuscript describes the research protocol of a project that measures mobility in Alzheimer's disease and related cognitive disorders in an innovative way, by taking advantage of advanced tracking technologies.}, + langid = {english}, + file = {/home/src/Offline/Papers/shoval et al_2008_the use of advanced tracking technologies for the analysis of mobility in.pdf} +} + +@book{sicile-kiraAutismSpectrumDisorders2004, + title = {Autism {{Spectrum Disorders}}: {{The}} Complete Guide to Understanding Autism}, + author = {Sicile-Kira, Chantal}, + date = {2004}, + publisher = {{Berkley Publishing Group}}, + keywords = {\#nosource} +} + +@article{siegrist1996adverse, + title = {Adverse Health Effects of High-Effort/Low-Reward Conditions.}, + author = {Siegrist, Johannes}, + date = {1996}, + journaltitle = {Journal of occupational health psychology}, + shortjournal = {J. Occup. Health Psychol.}, + volume = {1}, + number = {1}, + pages = {27}, + publisher = {{Educational Publishing Foundation}} +} + +@article{silverAdviceParachutingDocs, + title = {Advice {{To Parachuting Docs}}: {{Think Before You Jump Into Poor Countries}}}, + author = {Silver, Marc}, + pages = {7}, + langid = {english}, + file = {/home/src/Offline/Papers/silver_advice to parachuting docs.pdf} +} + +@incollection{silvestry-rodriguezSilverDisinfectant2007, + title = {Silver as a {{Disinfectant}}}, + booktitle = {Reviews of {{Environmental Contamination}} and {{Toxicology}}}, + author = {Silvestry-Rodriguez, Nadia and Sicairos-Ruelas, EnueE. and Gerba, CharlesP. and Bright, KellyR.}, + date = {2007-01-01}, + series = {Reviews of {{Environmental Contamination}} and {{Toxicology}}}, + volume = {191}, + pages = {23--45}, + publisher = {{Springer New York}}, + url = {http://dx.doi.org/10.1007/978-0-387-69163-3_2}, + isbn = {978-0-387-69162-6}, + langid = {english}, + keywords = {\#nosource} +} + +@article{simon1973american, + title = {American Scientist}, + author = {Simon, Herbert A and Chase, William G}, + date = {1973}, + journaltitle = {Scientist (Philadelphia, Pa.)}, + shortjournal = {Scientist}, + volume = {61}, + number = {4}, + pages = {394--403} +} + +@article{simon1974big, + title = {How {{Big Is}} a {{Chunk}}? {{By}} Combining Data from Several Experiments, a Basic Human Memory Unit Can Be Identified and Measured.}, + author = {Simon, Herbert A}, + date = {1974}, + journaltitle = {Science (New York, N.Y.)}, + shortjournal = {Science}, + volume = {183}, + number = {4124}, + pages = {482--488}, + publisher = {{American Association for the Advancement of Science}} +} + +@online{SizingChildrensSarah, + title = {Sizing – {{Childrens}} – {{Sarah Simpson Jewellery}}}, + url = {https://www.sarahsimpson.com.au/sizing/}, + urldate = {2020-02-11}, + langid = {american}, + file = {/home/cedarprince/Zotero/storage/K765LX7T/sizing.html} +} + +@book{skienaAlgorithmDesignManual2008, + title = {The {{Algorithm Design Manual}}}, + author = {Skiena, Steven S.}, + date = {2008}, + publisher = {{Springer London}}, + location = {{London}}, + doi = {10.1007/978-1-84800-070-4}, + isbn = {978-1-84800-069-8 978-1-84800-070-4}, + langid = {english}, + file = {/home/src/Papers/skiena_2008_the algorithm design manual.pdf} +} + +@article{slawsonGermaniumSilverResistance1992, + title = {Germanium and {{Silver Resistance}}, {{Accumulation}}, and {{Toxicity}} in {{Microorganisms}}}, + author = {Slawson, R. and Van Dyke, M. and Lee, H. and Trevors, J}, + date = {1992}, + journaltitle = {Plasmid}, + volume = {27}, + number = {1}, + pages = {72--79}, + keywords = {\#nosource} +} + +@online{SmartBeaconSB162a, + title = {Smart {{Beacon SB16-2}}}, + url = {https://store.kontakt.io/our-products/30-smart-beacon-sb16-2.html}, + urldate = {2020-04-30}, + file = {/home/cedarprince/Zotero/storage/WNH4LW3X/30-smart-beacon-sb16-2.html} +} + +@online{SmartBeaconSB183, + title = {Smart {{Beacon SB18-3}}}, + url = {https://store.kontakt.io/next-generation/45-smart-beacon-sb18-3.html}, + urldate = {2020-04-30} +} + +@article{smink2012epidemiology, + title = {Epidemiology of Eating Disorders: Incidence, Prevalence and Mortality Rates}, + author = {Smink, Frédérique RE and Van Hoeken, Daphne and Hoek, Hans W}, + date = {2012}, + journaltitle = {Current psychiatry reports}, + shortjournal = {Curr. Psychiatry Rep.}, + volume = {14}, + number = {4}, + pages = {406--414}, + publisher = {{Springer}} +} + +@article{smithEnvironmentalContextHuman1978, + title = {Environmental Context and Human Memory}, + author = {Smith, Steven M. and Glenberg, Arthur and Bjork, Robert A.}, + date = {1978-07}, + journaltitle = {Memory \& Cognition}, + shortjournal = {Memory \& Cognition}, + volume = {6}, + number = {4}, + pages = {342--353}, + issn = {0090-502X, 1532-5946}, + doi = {10.3758/BF03197465}, + langid = {english}, + file = {/home/src/Offline/Papers/smith et al_1978_environmental context and human memory.pdf} +} + +@misc{smithRiskFactorsIndicators2018, + title = {Risk {{Factors}} and {{Indicators Associated With Radicalization}} to {{Terrorism}} in the {{United States}}: {{What Research Sponsored}} by the {{National Institute}} of {{Justice Tells Us}}}, + author = {Smith, Allison}, + date = {2018-06}, + publisher = {{National Institute of Justice}}, + file = {/home/src/Papers/smith_2018_risk factors and indicators associated with radicalization to terrorism in the.pdf} +} + +@article{smithRoleHypothalamicpituitaryadrenalAxis2006, + title = {The Role of the Hypothalamic-Pituitary-Adrenal Axis in Neuroendocrine Responses to Stress}, + author = {Smith, Sean M. and Vale, Wylie W.}, + date = {2006-12}, + journaltitle = {Dialogues in Clinical Neuroscience}, + shortjournal = {Dialogues Clin Neurosci}, + volume = {8}, + number = {4}, + eprint = {17290797}, + eprinttype = {pmid}, + pages = {383--395}, + issn = {1294-8322}, + url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3181830/}, + urldate = {2020-05-04}, + abstract = {Animals respond to stress by activating a wide array of behavioral and physiological responses that are collectively referred to as the stress response. Corticotropin-releasing factor (CRF) plays a central role in the stress response by regulating the hypothalamic-pituitary-adrenal (HPA) axis. In response to stress, CRF initiates a cascade of events that culminate in the release of glucocorticoids from the adrenal cortex. As a result of the great number of physiological and behavioral effects exerted by glucocorticoids, several mechanisms have evolved to control HPA axis activation and integrate the stress response. Glucocorticoid feedback inhibition plays a prominent role in regulating the magnitude and duration of glucocorticoid release. In addition to glucocorticoid feedback, the HPA axis is regulated at the level of the hypothalamus by a diverse group of afferent projections from limbic, mid-brain, and brain stem nuclei. The stress response is also mediated in part by brain stem noradrenergic neurons, sympathetic andrenornedullary circuits, and parasympathetic systems. In summary, the aim of this review is to discuss the role of the HPA axis in the integration of adaptive responses to stress. We also identify and briefly describe the major neuronal and endocrine systems that contribute to the regulation of the HPA axis and the maintenance of homeostasis in the face of aversive stimuli.}, + pmcid = {PMC3181830}, + file = {/home/src/Offline/Papers/smith_vale_2006_the role of the hypothalamic-pituitary-adrenal axis in neuroendocrine responses.pdf} +} + +@article{smithTelehealthGlobalEmergencies2020, + title = {Telehealth for Global Emergencies: {{Implications}} for Coronavirus Disease 2019 ({{COVID-19}})}, + shorttitle = {Telehealth for Global Emergencies}, + author = {Smith, Anthony C and Thomas, Emma and Snoswell, Centaine L and Haydon, Helen and Mehrotra, Ateev and Clemensen, Jane and Caffery, Liam J}, + date = {2020-06-01}, + journaltitle = {Journal of Telemedicine and Telecare}, + shortjournal = {J Telemed Telecare}, + volume = {26}, + number = {5}, + pages = {309--313}, + publisher = {{SAGE Publications}}, + issn = {1357-633X}, + doi = {10.1177/1357633X20916567}, + abstract = {The current coronavirus disease 2019 (COVID-19) pandemic is again reminding us of the importance of using telehealth to deliver care, especially as a means of reducing the risk of cross-contamination caused by close contact. For telehealth to be effective as part of an emergency response it first needs to become a routinely used part of our health system. Hence, it is time to step back and ask why telehealth is not mainstreamed. In this article, we highlight key requirements for this to occur. Strategies to ensure that telehealth is used regularly in acute, post-acute and emergency situations, alongside conventional service delivery methods, include flexible funding arrangements, training and accrediting our health workforce. Telehealth uptake also requires a significant change management effort and the redesign of conventional models of care. Implementing telehealth proactively rather than reactively is more likely to generate greater benefits in the long-term, and help with the everyday (and emergency) challenges in healthcare.}, + file = {/Users/jzelko3/Knowledgebase/Papers/Smith et al_2020_Telehealth for global emergencies.pdf} +} + +@online{SocialEcologicalModel2018, + type = {https://www.cdc.gov/violenceprevention/overview/social-ecologicalmodel.html}, + title = {The {{Social Ecological Model A Framework}} for {{Prevention Violence Prevention Injury Center CDC}}}, + date = {2018-02-20}, + organization = {{Centers for Disease Control and Prevention}}, + file = {/home/src/Offline/Papers/2018_the social ecological model a framework for prevention violence prevention.pdf} +} + +@article{society2012publication, + title = {Publication Recommendations for Electrodermal Measurements}, + author = {Measures, Society for Psychophysiological Research Ad Hoc Committee on Electrodermal and Boucsein, Wolfram and Fowles, Don C and Grimnes, Sverre and Ben-Shakhar, Gershon and Roth, Walton T and Dawson, Michael E and Filion, Diane L}, + date = {2012}, + journaltitle = {Psychophysiology}, + volume = {49}, + number = {8}, + pages = {1017--1034}, + publisher = {{Wiley Online Library}} +} + +@article{societyforpsychophysiologicalresearchadhoccommitteeonelectrodermalmeasuresPublicationRecommendationsElectrodermal2012, + title = {Publication Recommendations for Electrodermal Measurements: {{Publication}} Standards for {{EDA}}}, + shorttitle = {Publication Recommendations for Electrodermal Measurements}, + author = {{Society for Psychophysiological Research Ad Hoc Committee on Electrodermal Measures}}, + date = {2012-08}, + journaltitle = {Psychophysiology}, + shortjournal = {Psychophysiol}, + volume = {49}, + number = {8}, + pages = {1017--1034}, + issn = {00485772}, + doi = {10.1111/j.1469-8986.2012.01384.x}, + abstract = {This committee was appointed by the SPR Board to provide recommendations for publishing data on electrodermal activity (EDA). They are intended to be a stand-alone source for newcomers and experienced users. A short outline of principles for electrodermal measurement is given, and recommendations from an earlier report (Fowles et al., 1981) are incorporated. Three fundamental techniques of EDA recording are described: (1) endosomatic recording without the application of an external current, (2) exosomatic recording with direct current (the most widely applied methodology), and (3) exosomatic recording with alternating current—to date infrequently used but a promising future methodology. In addition to EDA recording in laboratories, ambulatory recording has become an emerging technique. Specific problems that come with this recording of EDA in the field are discussed, as are those emerging from recording EDA within a magnetic field (e.g., fMRI). Recommendations for the details that should be mentioned in publications of EDA methods and results are provided.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/PX5Q48DE/Society for Psychophysiological Research Ad Hoc Committee on Electrodermal Measures - 2012 - Publication recommendations for electrodermal meas.pdf} +} + +@article{solis2020structural, + title = {Structural Vulnerability in the United States Revealed in Three Waves of Novel Coronavirus Disease (Covid-19)}, + author = {Solis, Jamie and Franco-Paredes, Carlos and Henao-Martínez, Andrés F and Krsak, Martin and Zimmer, Shanta M}, + date = {2020}, + journaltitle = {The American journal of tropical medicine and hygiene}, + shortjournal = {Am. J. Trop. Med. Hyg.}, + pages = {tpmd200391}, + publisher = {{ASTMH}} +} + +@misc{sonabendFlexibleGroupFairness2022, + title = {Flexible {{Group Fairness Metrics}} for {{Survival Analysis}}}, + author = {Sonabend, Raphael and Pfisterer, Florian and Mishler, Alan and Schauer, Moritz and Burk, Lukas and Mukherjee, Sumantrak and Vollmer, Sebastian}, + date = {2022-07-22}, + number = {arXiv:2206.03256}, + eprint = {2206.03256}, + eprinttype = {arxiv}, + primaryclass = {cs, stat}, + publisher = {{arXiv}}, + doi = {10.48550/arXiv.2206.03256}, + abstract = {Algorithmic fairness is an increasingly important field concerned with detecting and mitigating biases in machine learning models. There has been a wealth of literature for algorithmic fairness in regression and classification however there has been little exploration of the field for survival analysis. Survival analysis is the prediction task in which one attempts to predict the probability of an event occurring over time. Survival predictions are particularly important in sensitive settings such as when utilising machine learning for diagnosis and prognosis of patients. In this paper we explore how to utilise existing survival metrics to measure bias with group fairness metrics. We explore this in an empirical experiment with 29 survival datasets and 8 measures. We find that measures of discrimination are able to capture bias well whereas there is less clarity with measures of calibration and scoring rules. We suggest further areas for research including prediction-based fairness metrics for distribution predictions.}, + archiveprefix = {arXiv}, + keywords = {Computer Science - Computers and Society,Computer Science - Machine Learning,Statistics - Applications,Statistics - Methodology}, + file = {/home/cedarprince/Zotero/storage/CRSFRJMK/Sonabend et al_2022_Flexible Group Fairness Metrics for Survival Analysis.pdf;/home/cedarprince/Zotero/storage/EDT7SLJL/2206.html} +} + +@article{sondiSilverNanoparticlesAntimicrobial2004, + title = {Silver Nanoparticles as Antimicrobial Agent: A Case Study on {{E}}. Coli as a~Model for {{Gram-negative}} Bacteria}, + author = {Sondi, Ivan and Salopek-Sondi, Branka}, + year = {2004/1/1/2004///}, + journaltitle = {Journal of Colloid And Interface Science}, + shortjournal = {Journal of Colloid And Interface Science}, + volume = {275}, + pages = {177--182}, + issn = {0021-9797}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0021979704001638&site=eds-live&scope=site}, + abstract = {The antimicrobial activity of silver nanoparticles against E. coli was investigated as a model for Gram-negative bacteria. Bacteriological tests were performed in Luria–Bertani (LB) medium on solid agar plates and in liquid systems supplemented with different concentrations of nanosized silver particles. These particles were shown to be an effective bactericide. Scanning and transmission electron microscopy (SEM and TEM) were used to study the biocidal action of this nanoscale material. The results confirmed that the treated E.~coli cells were damaged, showing formation of “pits” in the cell wall of the bacteria, while the silver nanoparticles were found to accumulate in the bacterial membrane. A~membrane with such a morphology exhibits a significant increase in permeability, resulting in death of the cell. These nontoxic nanomaterials, which can be prepared in a simple and cost-effective manner, may be suitable for the formulation of new types of bactericidal materials.}, + keywords = {\#nosource,and colloid stability,colloid materials,Fine particles} +} + +@article{soniMedicaidExpansionAffordable2017, + title = {Medicaid Expansion under the {{Affordable Care Act}} and Insurance Coverage in Rural and Urban Areas}, + author = {Soni, Aparna and Hendryx, Michael and Simon, Kosali}, + date = {2017}, + journaltitle = {The Journal of Rural Health}, + shortjournal = {J. Rural Health}, + volume = {33}, + number = {2}, + pages = {217--226}, + publisher = {{Wiley Online Library}}, + isbn = {0890-765X} +} + +@online{SpacingEffect2020, + title = {Spacing {{Effect}}}, + date = {2020}, + organization = {{Spacing Effect}}, + file = {/home/src/Offline/Papers/2020_spacing effect.pdf} +} + +@article{spataroWhyPeopleBecome2008, + title = {Why {{Do People Become Terrorists}}?: {{A Prosecutor}}'s {{Experiences}}}, + shorttitle = {Why {{Do People Become Terrorists}}?}, + author = {Spataro, A.}, + date = {2008-07-01}, + journaltitle = {Journal of International Criminal Justice}, + shortjournal = {Journal of International Criminal Justice}, + volume = {6}, + number = {3}, + pages = {507--524}, + issn = {1478-1387, 1478-1395}, + doi = {10.1093/jicj/mqn033}, + abstract = {Undeniably the marginalizationsuffered by many Islamic emigrants (particularly from North Africa) and the consequent difficulties in fitting in the land of adoption, constitute contributorycauses - of a socio-economic nature - of their drift into terrorism. However, a distorted view of the principles of Islam and a violent and criminal interpretationof the obligation of Jihad constitute the main factorof their drive. Statements made in the course of interrogationby arrested terrorists(especially by supergrasses,referredto in Italy as 'repenters')as well as ideologicaldocuments disseminated internationallyon the internet or items seized in the course of various judicial enquiries consistently show that the religious view of the world, obviously in the distorted perspective specific to terrorists, constitutes the main reasonfor their behaviour,whereas practicallyno importanceattaches to the aspiration to liberate specific occupied territoriesor oppressed peoples. Another possible motivation, at leastfor suicidal acts, is linked with those of an economic nature: in connection with various judicialinvestigationsit has emerged that sums of money collected as voluntary contributions from the faithful' serves not to finance the 'terrorist act' as such, but to guarantee a future for family members of a suicide attacker,or someone who died in the course of a terroristaction.}, + langid = {english}, + file = {/home/src/Papers/spataro_2008_why do people become terrorists.pdf} +} + +@movie{spielbergSchindlerList1993, + type = {Biography, Drama, History}, + title = {Schindler's {{List}}}, + editor = {Spielberg, Steven}, + date = {1993-12-15}, + publisher = {{Universal Pictures, Amblin Entertainment}}, + abstract = {Schindler's List is a movie starring Liam Neeson, Ralph Fiennes, and Ben Kingsley. In German-occupied Poland during World War II, industrialist Oskar Schindler gradually becomes concerned for his Jewish workforce after witnessing...}, + editora = {Keneally, Thomas and Zaillian, Steven and Neeson, Liam and Fiennes, Ralph and Kingsley, Ben and Goodall, Caroline}, + editoratype = {scriptwriter}, + editortype = {director}, + keywords = {accountant,champagne,soap,villa,womanizer}, + annotation = {IMDb ID: tt0108052 event-location: USA} +} + +@article{spong2018improving, + title = {Improving Public Health Requires Inclusion of Underrepresented Populations in Research}, + author = {Spong, Catherine Y and Bianchi, Diana W}, + date = {2018}, + journaltitle = {Jama}, + volume = {319}, + number = {4}, + pages = {337--338}, + publisher = {{American Medical Association}} +} + +@article{springerAutomatedSignalQuality2016, + title = {Automated Signal Quality Assessment of Mobile Phone-Recorded Heart Sound Signals}, + author = {Springer, David B. and Brennan, Thomas and Ntusi, Ntobeko and Abdelrahman, Hassan Y. and Zühlke, Liesl J. and Mayosi, Bongani M. and Tarassenko, Lionel and Clifford, Gari D.}, + date = {2016-11-16}, + journaltitle = {Journal of Medical Engineering \& Technology}, + shortjournal = {Journal of Medical Engineering \& Technology}, + volume = {40}, + number = {7-8}, + pages = {342--355}, + issn = {0309-1902, 1464-522X}, + doi = {10.1080/03091902.2016.1213902}, + abstract = {Mobile phones, due to their audio processing capabilities, have the potential to facilitate the diagnosis of heart disease through automated auscultation. However, such a platform is likely to be used by non-experts, and hence, it is essential that such a device is able to automatically differentiate poor quality from diagnostically useful recordings since non-experts are more likely to make poor-quality recordings. This paper investigates the automated signal quality assessment of heart sound recordings performed using both mobile phone-based and commercial medicalgrade electronic stethoscopes. The recordings, each 60 s long, were taken from 151 random adult individuals with varying diagnoses referred to a cardiac clinic and were professionally annotated by five experts. A mean voting procedure was used to compute a final quality label for each recording. Nine signal quality indices were defined and calculated for each recording. A logistic regression model for classifying binary quality was then trained and tested. The interrater agreement level for the stethoscope and mobile phone recordings was measured using Conger’s kappa for multiclass sets and found to be 0.24 and 0.54, respectively. One-third of all the mobile phone-recorded phonocardiogram (PCG) signals were found to be of sufficient quality for analysis. The classifier was able to distinguish good- and poor-quality mobile phone recordings with 82.2\% accuracy, and those made with the electronic stethoscope with an accuracy of 86.5\%. We conclude that our classification approach provides a mechanism for substantially improving auscultation recordings by non-experts. This work is the first systematic evaluation of a PCG signal quality classification algorithm (using a separate test dataset) and assessment of the quality of PCG recordings captured by non-experts, using both a medicalgrade digital stethoscope and a mobile phone.}, + langid = {english}, + keywords = {cliffordlab}, + file = {/home/cedarprince/Zotero/storage/X5QNS8XZ/Springer et al. - 2016 - Automated signal quality assessment of mobile phon.pdf;/home/src/Offline/Papers/springer et al_2016_automated signal quality assessment of mobile phone-recorded heart sound signals.pdf} +} + +@inproceedings{springerSignalQualityClassification2014, + title = {Signal Quality Classification of Mobile Phone-Recorded Phonocardiogram Signals}, + booktitle = {2014 {{IEEE International Conference}} on {{Acoustics}}, {{Speech}} and {{Signal Processing}} ({{ICASSP}})}, + author = {Springer, D.B. and Brennan, T. and Zuhlke, L. J. and Abdelrahman, H. Y. and Ntusi, N. and Clifford, G.D. and Mayosi, B.M and Tarassenko, L.}, + date = {2014-05}, + pages = {1335--1339}, + publisher = {{IEEE}}, + location = {{Florence, Italy}}, + doi = {10.1109/ICASSP.2014.6853814}, + eventtitle = {{{ICASSP}} 2014 - 2014 {{IEEE International Conference}} on {{Acoustics}}, {{Speech}} and {{Signal Processing}} ({{ICASSP}})}, + isbn = {978-1-4799-2893-4}, + keywords = {cliffordlab}, + file = {/home/cedarprince/Zotero/storage/S2XMWY9C/Springer et al. - 2014 - Signal quality classification of mobile phone-reco.pdf;/home/src/Offline/Papers/springer et al_2014_signal quality classification of mobile phone-recorded phonocardiogram signals.pdf} +} + +@inproceedings{sriprakashQuestionsRaceEducation2018, + title = {Questions of {{Race}} in {{Education}} and {{Development}}}, + author = {Sriprakash, Arathi and Walker, Sharon}, + date = {2018}, + location = {{University of Cambridge, UK}}, + eventtitle = {Questions of {{Race}} in {{Education}} and {{Development Workshop}}} +} + +@article{stacey2017using, + title = {Using {{EHR}} Data Extraction to Streamline the Clinical Trial Process}, + author = {Stacey, J and Mehta, M}, + date = {2017}, + journaltitle = {Clinical Researcher}, + shortjournal = {Clin. Res.}, + volume = {4}, + pages = {2--7} +} + +@article{stang2010advancing, + title = {Advancing the Science for Active Surveillance: Rationale and Design for the {{Observational Medical Outcomes Partnership}}}, + author = {Stang, Paul E and Ryan, Patrick B and Racoosin, Judith A and Overhage, J Marc and Hartzema, Abraham G and Reich, Christian and Welebob, Emily and Scarnecchia, Thomas and Woodcock, Janet}, + date = {2010}, + journaltitle = {Annals of internal medicine}, + shortjournal = {Ann. Intern. Med.}, + volume = {153}, + number = {9}, + pages = {600--606}, + publisher = {{American College of Physicians}} +} + +@article{stapff2017use, + title = {Use of Electronic Health Data in Clinical Development}, + author = {Stapff, Manfred}, + date = {2017}, + journaltitle = {Pharm. Ind}, + volume = {79}, + number = {2}, + pages = {204--210} +} + +@online{StatementSecondMeeting, + title = {Statement on the Second Meeting of the {{International Health Regulations}} (2005) {{Emergency Committee}} Regarding the Outbreak of Novel Coronavirus (2019-{{nCoV}})}, + url = {https://www.who.int/news-room/detail/30-01-2020-statement-on-the-second-meeting-of-the-international-health-regulations-(2005)-emergency-committee-regarding-the-outbreak-of-novel-coronavirus-(2019-ncov)}, + urldate = {2020-03-10}, + abstract = {Following the advice of the Emergency Committee today, WHO Director-General has declared the outbreak of novel coronavirus (2019-nCoV) a Public Health Emergency of International Concern. In China, more than 7700 cases have been confirmed, and 170 people have died. There are 82 additional cases confirmed in 18 countries.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/J4KLY3YX/30-01-2020-statement-on-the-second-meeting-of-the-international-health-regulations-(2005)-emerg.html} +} + +@article{steptoe2002role, + title = {The Role of Psychobiological Pathways in Socio-Economic Inequalities in Cardiovascular Disease Risk}, + author = {Steptoe, Andrew and Marmot, Michael}, + date = {2002}, + journaltitle = {European heart journal}, + shortjournal = {Eur. Heart J.}, + volume = {23}, + number = {1}, + pages = {13--25}, + publisher = {{Oxford University Press}} +} + +@article{steptoe2002stress, + title = {Stress Responsivity and Socioeconomic Status. {{A}} Mechanism for Increased Cardiovascular Disease Risk?}, + author = {Steptoe, Andrew and Feldman, Pamela J and Kunz, Sabine and Owen, Natalie and Willemsen, Gonneke and Marmot, Michael}, + date = {2002}, + journaltitle = {European heart journal}, + shortjournal = {Eur. Heart J.}, + volume = {23}, + number = {22}, + pages = {1757--1763}, + publisher = {{Oxford University Press}} +} + +@article{stickgold2000visual, + title = {Visual Discrimination Learning Requires Sleep after Training}, + author = {Stickgold, Robert and James, LaTanya and Hobson, J Allan}, + date = {2000}, + journaltitle = {Nature neuroscience}, + shortjournal = {Nat. Neurosci.}, + volume = {3}, + number = {12}, + pages = {1237--1238}, + publisher = {{Nature Publishing Group}} +} + +@online{StoryTIMETrump, + title = {The {{Story Behind TIME}}'s {{Trump}} '{{Welcome To America}}' {{Cover}}}, + url = {http://time.com/5317522/donald-trump-border-cover/}, + urldate = {2018-06-23}, + abstract = {The photograph of a two-year-old Honduran girl is featured on the July 2 cover}, + langid = {english}, + organization = {{Time}}, + keywords = {children,human-rights,immigration,south-america,TIME,united-states}, + file = {/home/cedarprince/Zotero/storage/F7YUQZQU/donald-trump-border-cover.html} +} + +@article{stotler2016wearable, + title = {Wearable Devices and Associated Systems}, + author = {Stotler, James G}, + date = {2016-05-10}, + publisher = {{Google Patents}} +} + +@book{strangIntroductionLinearAlgebra2016, + title = {Introduction to {{Linear Algebra}}}, + author = {Strang, Gilbert}, + date = {2016}, + edition = {5}, + publisher = {{Wellesey - Cambridge Press}}, + langid = {english}, + file = {/home/src/Papers/strang_2016_introduction to linear algebra.pdf} +} + +@misc{StrengtheningHelathSystems2007, + title = {Strengthening {{Helath Systems}} to {{Improve Health Outcomes}}}, + date = {2007}, + publisher = {{World Health Organization}}, + file = {/home/src/Offline/Papers/2007_strengthening helath systems to improve health outcomes.pdf} +} + +@article{stromland1994autism, + title = {Autism in Thalidomide Embryopathy: A Population Study}, + author = {Strömland, K and Nordin, V and Miller, M and Akerström, B and Gillberg, C}, + date = {1994}, + journaltitle = {Developmental Medicine \& Child Neurology}, + shortjournal = {Dev. Med. Child Neurol.}, + volume = {36}, + number = {4}, + pages = {351--356}, + publisher = {{Wiley Online Library}} +} + +@article{strouxDopplerbasedFetalHeart2017, + title = {Doppler-Based Fetal Heart Rate Analysis Markers for the Detection of Early Intrauterine Growth Restriction}, + author = {Stroux, Lisa and Redman, Christopher W. and Georgieva, Antoniya and Payne, Stephen J. and Clifford, Gari D.}, + date = {2017-11}, + journaltitle = {Acta Obstetricia et Gynecologica Scandinavica}, + shortjournal = {Acta Obstet Gynecol Scand}, + volume = {96}, + number = {11}, + pages = {1322--1329}, + issn = {00016349}, + doi = {10.1111/aogs.13228}, + abstract = {Introduction: One indicator for fetal risk of mortality is intra-uterine growth restriction (IUGR). Whether markers reflecting the impact of growth restriction on the cardiovascular system, computed from a Doppler-derived heart rate signal, would be suitable in its detection antenatally were studied. Material and Methods: We used a cardiotocography archive of 1163 IUGR cases and 1163 healthy controls, matched for gestation and gender. We assessed the discriminative power of short-term variability (STV) and long-term variability (LTV) of the fetal heart rate, computed over episodes of high and low variation aiming to separate growth-restricted fetuses from controls. Metrics characterizing the sleep state distribution within a trace were also considered for inclusion into an IUGR detection model. Results: Significant differences in the risk markers comparing growth-restricted with healthy fetuses were found. When used in a logistic regression classifier, their performance for identifying IUGR was considerably superior before 34 weeks gestation. LTV in active sleep was superior to STV (AUROC of 72\% compared to 71\%). Most predictive was the number of minutes in high variation per hour (AUROC of 75\%). A multivariate IUGR prediction model improved the AUROC to 76\%. Conclusion: We suggest that heart rate variability markers together with surrogate information on sleep states can contribute to the detection of early-onset IUGR.}, + langid = {english}, + keywords = {cliffordlab}, + file = {/home/cedarprince/Zotero/storage/6282N2XY/Stroux et al. - 2017 - Doppler-based fetal heart rate analysis markers fo.pdf;/home/src/Offline/Papers/stroux et al_2017_doppler-based fetal heart rate analysis markers for the detection of early.pdf} +} + +@article{strouxMHealthMonitoringSystem2016, + title = {An {{mHealth}} Monitoring System for Traditional Birth Attendant-Led Antenatal Risk Assessment in Rural {{Guatemala}}}, + author = {Stroux, Lisa and Martinez, Boris and Coyote Ixen, Enma and King, Nora and Hall-Clifford, Rachel and Rohloff, Peter and Clifford, Gari D.}, + date = {2016-11-16}, + journaltitle = {Journal of Medical Engineering \& Technology}, + shortjournal = {J. Med. Eng. Technol.}, + volume = {40}, + number = {7-8}, + pages = {356--371}, + issn = {0309-1902, 1464-522X}, + doi = {10.1080/03091902.2016.1223196}, + abstract = {Limited funding for medical technology, low levels of education and poor infrastructure for delivering and maintaining technology severely limit medical decision support in low- and middle-income countries. Perinatal and maternal mortality is of particular concern with millions dying every year from potentially treatable conditions. Guatemala has one of the worst maternal mortality ratios, the highest incidence of intra-uterine growth restriction (IUGR), and one of the lowest gross national incomes per capita within Latin America. To address the lack of decision support in rural Guatemala, a smartphone-based system is proposed including peripheral sensors, such as a handheld Doppler for the identification of foetal compromise. Designed for use by illiterate birth attendants, the system uses pictograms, audio guidance, local and cloud processing, SMS alerts and voice calling. The initial prototype was evaluated on 22 women in highland Guatemala. Results were fed back into the refinement of the system, currently undergoing RCT evaluation.}, + langid = {english}, + keywords = {cliffordlab,guatemala,LMIC,maternal-health,mHealth,technology}, + file = {/home/cedarprince/Zotero/storage/5GBKHQHF/Stroux et al. - 2016 - An mHealth monitoring system for traditional birth.pdf} +} + +@online{StudyWatchVerily, + title = {Study {{Watch}} - {{Verily Life Sciences}}}, + url = {https://verily.com/projects/sensors/study-watch/}, + urldate = {2019-12-10}, + abstract = {Verily is focused on using technology to better understand health, as well as prevent, detect, and manage disease. Our mission is to bring together technology and life sciences to uncover new truths about health and disease.}, + file = {/home/cedarprince/Zotero/storage/I3EFQLZ6/study-watch.html} +} + +@article{stuss1995multidisciplinary, + title = {A Multidisciplinary Approach to Anterior Attentional Functions.}, + author = {Stuss, Donald T and Shallice, Tim and Alexander, Mick P and Picton, Terry W}, + date = {1995}, + publisher = {{New York Academy of Sciences}} +} + +@online{Suicide, + title = {Suicide}, + url = {http://www.who.int/news-room/fact-sheets/detail/suicide}, + urldate = {2018-07-28}, + abstract = {Every year more than 800 000 people take their own life and there are many more people who attempt suicide.}, + langid = {english}, + organization = {{World Health Organization}}, + keywords = {global-health,public-health,suicide,world-health-organization}, + file = {/home/cedarprince/Zotero/storage/22G5DJZX/suicide.html} +} + +@article{sullivan1995mortality, + title = {Mortality in Anorexia Nervosa}, + author = {Sullivan, Patrick F and others}, + date = {1995}, + journaltitle = {American Journal of Psychiatry}, + shortjournal = {Am. J. Psychiatry}, + volume = {152}, + number = {7}, + pages = {1073--1074}, + publisher = {{Citeseer}} +} + +@book{sullivan2006revealing, + title = {Revealing Whiteness: {{The}} Unconscious Habits of Racial Privilege}, + author = {Sullivan, Shannon}, + date = {2006}, + publisher = {{Indiana University Press}} +} + +@article{sumi2006sibling, + title = {Sibling Risk of Pervasive Developmental Disorder Estimated by Means of an Epidemiologic Survey in {{Nagoya}}, {{Japan}}}, + author = {Sumi, Satoshi and Taniai, Hiroko and Miyachi, Taishi and Tanemura, Mitsuyo}, + date = {2006}, + journaltitle = {Journal of human genetics}, + shortjournal = {J. Hum. Genet.}, + volume = {51}, + number = {6}, + pages = {518--522}, + publisher = {{Nature Publishing Group}} +} + +@article{summerfelt2015scalable, + title = {Scalable Hospital at Home with Virtual Physician Visits: Pilot Study}, + author = {Summerfelt, Wm Thomas and Sulo, Suela and Robinson, Adriane and Chess, David and Catanzano, Kate}, + date = {2015}, + journaltitle = {The American journal of managed care}, + shortjournal = {Am J Manag Care}, + volume = {21}, + number = {10}, + pages = {675--84} +} + +@unpublished{sunAssessingPhenotypeDefinitions2022, + title = {Assessing {{Phenotype Definitions}} for {{Algorithmic Fairness}}}, + author = {Sun, Tony Y. and Bhave, Shreyas and Altosaar, Jaan and Elhadad, Noémie}, + date = {2022-03-10}, + shortjournal = {ArXiv220305174 Cs Q-Bio}, + eprint = {2203.05174}, + eprinttype = {arxiv}, + primaryclass = {cs, q-bio}, + url = {http://arxiv.org/abs/2203.05174}, + urldate = {2022-04-29}, + abstract = {Disease identification is a core, routine activity in observational health research. Cohorts impact downstream analyses, such as how a condition is characterized, how patient risk is defined, and what treatments are studied. It is thus critical to ensure that selected cohorts are representative of all patients, independently of their demographics or social determinants of health. While there are multiple potential sources of bias when constructing phenotype definitions which may affect their fairness, it is not standard in the field of phenotyping to consider the impact of different definitions across subgroups of patients. In this paper, we propose a set of best practices to assess the fairness of phenotype definitions. We leverage established fairness metrics commonly used in predictive models and relate them to commonly used epidemiological cohort description metrics. We describe an empirical study for Crohn's disease and diabetes type 2, each with multiple phenotype definitions taken from the literature across two sets of patient subgroups (gender and race). We show that the different phenotype definitions exhibit widely varying and disparate performance according to the different fairness metrics and subgroups. We hope that the proposed best practices can help in constructing fair and inclusive phenotype definitions.}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {Computer Science - Artificial Intelligence,Computer Science - Machine Learning,Quantitative Biology - Other Quantitative Biology}, + file = {/home/cedarprince/Zotero/storage/65L3QMAZ/Sun et al_2022_Assessing Phenotype Definitions for Algorithmic Fairness.pdf} +} + +@article{svarstadUsingDrugClaims2001, + title = {Using {{Drug Claims Data}} to {{Assess}} the {{Relationship}} of {{Medication Adherence With Hospitalization}} and {{Costs}}}, + author = {Svarstad, Bonnie L. and Shireman, Theresa I. and Sweeney, J. K.}, + date = {2001-06}, + journaltitle = {Psychiatric Services}, + shortjournal = {PS}, + volume = {52}, + number = {6}, + pages = {805--811}, + publisher = {{American Psychiatric Publishing}}, + issn = {1075-2730}, + doi = {10.1176/appi.ps.52.6.805}, + abstract = {OBJECTIVE: This naturalistic study used claims data to examine the relationship of medication nonadherence to hospital use and costs among severely mentally ill clients in Wisconsin. METHODS: Data for 619 clients were obtained from Medicaid drug and hospital claims, county records, and case managers as part of a larger study in eight county-based mental health systems. Study participants were eligible for Medicaid, had a severe and persistent mental illness, were 18 years or older, and were receiving neuroleptics, lithium, or antidepressants. Drug claims were analyzed for a 12-month period to determine how regularly clients obtained their medications. Regression analyses were used to assess the effects of irregular medication use on any hospitalization for psychiatric problems, the number of days hospitalized, and hospital costs. The analyses controlled for several risk factors. RESULTS: Among clients with schizophrenia or schizoaffective disorder, 31 percent used medications irregularly. The rates were 33 percent among those with bipolar disorder and 41 percent among those with other severe mental illnesses. In the total sample, irregular users had significantly higher rates of hospitalization than regular users (42 percent versus 20 percent), more hospital days (16 days versus four days), and higher hospital costs (\$3,992 versus \$1,048). Irregular medication use was one of the strongest predictors of hospital use and costs even after the analyses controlled for diagnosis, demographic characteristics, baseline functioning, and previous hospitalizations. CONCLUSIONS: The availability of drug claims data and the ability to use them in predictive analyses make them a potentially useful data source in studies of medication adherence among persons with severe mental illness.}, + file = {/Users/jzelko3/Knowledgebase/Papers/Svarstad et al_2001_Using Drug Claims Data to Assess the Relationship of Medication Adherence With.pdf} +} + +@article{sykes7YearReviewSafety2012, + title = {A 7-{{Year Review}} of the {{Safety}} of {{Tonsillectomy}} during {{Short-Term Medical Mission Trips}}}, + author = {Sykes, Kevin J. and Le, Phong T. and Sale, Keith A. and Nicklaus, Pamela J.}, + date = {2012-05}, + journaltitle = {Otolaryngology–Head and Neck Surgery}, + shortjournal = {Otolaryngol Head Neck Surg}, + volume = {146}, + number = {5}, + pages = {752--756}, + issn = {0194-5998, 1097-6817}, + doi = {10.1177/0194599812437317}, + abstract = {Objective. To evaluate the safety of tonsillectomy in a shortterm medical mission setting. Study Design. Retrospective chart review. Setting. Catholic mission hospital in Guatemala. Subjects and Methods. During 7 consecutive annual mission trips from 2004 to 2010, patients received tonsillectomy and adenotonsillectomy. Established safety protocol requires candidates for tonsillectomy to agree to stay within 1 hour of the hospital for 10 days following the operation. This study includes all tonsillectomy patients regardless of age or indication for tonsillectomy. The primary outcome measures include posttonsillectomy hemorrhage, nasopharyngeal reflux, readmission for dehydration, and mortality. This is a novel study as the work performed by most short-term medical missions is unregulated and unevaluated. Results. Medical charts were available for 197 (96.6\%) of the 204 patients receiving tonsillectomy in the 7-year period; this was the only inclusion criterion. Ninety-nine (50.3\%) patients had tonsillectomy concomitantly with adenoidectomy. Patients ranged in age from 3 to 66 years. The mean (SD) age was 17.2 (14.0) years. The study team found documentation of postoperative complications in 3 (1.5\%) patients; 2 experienced postoperative hemorrhage, 1 within the first postoperative hour and 1 at 96 hours. The final patient returned to the hospital within 24 hours symptomatic for dehydration. Conclusions. The authors have evaluated a protocol for tonsillectomy patients in a specific setting and believe their data represent satisfactory outcomes for the reviewed patients. The generalizability of this information is uncertain, but safety protocols should be established on all short-term medical missions to prevent untoward complications.}, + langid = {english}, + file = {/home/src/Offline/Papers/sykes et al_2012_a 7-year review of the safety of tonsillectomy during short-term medical.pdf} +} + +@article{tagliazucchi2011spontaneous, + title = {Spontaneous {{BOLD}} Event Triggered Averages for Estimating Functional Connectivity at Resting State}, + author = {Tagliazucchi, Enzo and Balenzuela, Pablo and Fraiman, Daniel and Montoya, Pedro and Chialvo, Dante R}, + date = {2011}, + journaltitle = {Neuroscience letters}, + shortjournal = {Neurosci. Lett.}, + volume = {488}, + number = {2}, + pages = {158--163}, + publisher = {{Elsevier}} +} + +@article{tagliazucchi2012criticality, + title = {Criticality in Large-Scale Brain {{fMRI}} Dynamics Unveiled by a Novel Point Process Analysis}, + author = {Tagliazucchi, Enzo and Balenzuela, Pablo and Fraiman, Daniel and Chialvo, Dante R}, + date = {2012}, + journaltitle = {Frontiers in physiology}, + shortjournal = {Front. Physiol.}, + volume = {3}, + pages = {15}, + publisher = {{Frontiers}} +} + +@article{tagliazucchi2014enhanced, + title = {Enhanced Repertoire of Brain Dynamical States during the Psychedelic Experience}, + author = {Tagliazucchi, Enzo and Carhart-Harris, Robin and Leech, Robert and Nutt, David and Chialvo, Dante R}, + date = {2014}, + journaltitle = {Human brain mapping}, + shortjournal = {Hum. Brain Mapp.}, + volume = {35}, + number = {11}, + pages = {5442--5456}, + publisher = {{Wiley Online Library}} +} + +@article{tagliazucchi2016voxel, + title = {The Voxel-Wise Functional Connectome Can Be Efficiently Derived from Co-Activations in a Sparse Spatio-Temporal Point-Process}, + author = {Tagliazucchi, Enzo and Siniatchkin, Michael and Laufs, Helmut and Chialvo, Dante R}, + date = {2016}, + journaltitle = {Frontiers in neuroscience}, + shortjournal = {Front. Neurosci.}, + volume = {10}, + pages = {381}, + publisher = {{Frontiers}} +} + +@article{tahirTerrorismItsDeterminants2020, + title = {Terrorism and Its {{Determinants}}: {{Panel Data Evidence}} from 94 {{Countries}}}, + shorttitle = {Terrorism and Its {{Determinants}}}, + author = {Tahir, Muhammad}, + date = {2020-03}, + journaltitle = {Applied Research in Quality of Life}, + shortjournal = {Applied Research Quality Life}, + volume = {15}, + number = {1}, + pages = {1--16}, + issn = {1871-2584, 1871-2576}, + doi = {10.1007/s11482-018-9660-x}, + abstract = {In recent years, the world is plagued by terrorism which has slowed down economic growth and development across countries. This paper focuses on the terrorism affected countries to determine what actually causes terrorism. The paper utilized a comprehensive sample of 94 countries from 2005 to 2016 and employed suitable econometric techniques to estimate the specified models. The results revealed that low per capita income and political instability are the main driving forces behind prevalent terrorism. Similarly, the growths of both physical as well as human capital have reduced terrorism whilst inflation and government consumption have positively influenced terrorism. The role of military expenditures is observed to be dual as it impacted terrorism negatively in Muslim countries and positively in non-Muslim countries. Decreased corruption is found to be insignificant for the sample as whole but appeared to be having a negative impact on terrorism when the sample is divided between Muslim and non-Muslim countries. The robustness exercise has also revealed similar findings. Lastly, we found bidirectional causality between political instability and terrorism, political instability and corruption, government consumption and inflation and the growth of GDP per capita and the growth of physical capital stock. The paper suggests that countries where terrorism is on the rise shall focus on increasing income of the population, education, capital stock along with ensuring political stability to eradicate the problem of terrorism.}, + langid = {english}, + file = {/home/src/Papers/tahir_2020_terrorism and its determinants.pdf} +} + +@article{tangIncidenceADAfricanAmericans2001, + title = {Incidence of {{AD}} in {{African-Americans}}, {{Caribbean Hispanics}}, and {{Caucasians}} in Northern {{Manhattan}}}, + author = {Tang, M.-X. and Cross, P. and Andrews, H. and Jacobs, D. M. and Small, S. and Bell, K. and Merchant, C. and Lantigua, R. and Costa, R. and Stern, Y. and Mayeux, R.}, + date = {2001-01-09}, + journaltitle = {Neurology}, + shortjournal = {Neurology}, + volume = {56}, + number = {1}, + pages = {49--56}, + issn = {0028-3878, 1526-632X}, + doi = {10.1212/WNL.56.1.49}, + langid = {english}, + file = {/home/src/Offline/Papers/tang et al_2001_incidence of ad in african-americans, caribbean hispanics, and caucasians in.pdf} +} + +@article{taniai2008genetic, + title = {Genetic Influences on the Broad Spectrum of Autism: {{Study}} of Proband-Ascertained Twins}, + author = {Taniai, Hiroko and Nishiyama, Takeshi and Miyachi, Taishi and Imaeda, Masayuki and Sumi, Satoshi}, + date = {2008}, + journaltitle = {American Journal of Medical Genetics Part B: Neuropsychiatric Genetics}, + shortjournal = {Am. J. Med. Genet. B Neuropsychiatr. Genet.}, + volume = {147}, + number = {6}, + pages = {844--849}, + publisher = {{Wiley Online Library}} +} + +@article{tantam1992personality, + title = {Personality Disorder and Self-Wounding}, + author = {Tantam, Digby and Whittaker, Jane}, + date = {1992}, + journaltitle = {The British Journal of Psychiatry}, + shortjournal = {Br. J. Psychiatry}, + volume = {161}, + number = {4}, + pages = {451--464}, + publisher = {{Cambridge University Press}} +} + +@report{taquetBidirectionalAssociationsCOVID192020, + type = {preprint}, + title = {Bidirectional Associations between {{COVID-19}} and Psychiatric Disorder: A Study of 62,354 {{COVID-19}} Cases}, + shorttitle = {Bidirectional Associations between {{COVID-19}} and Psychiatric Disorder}, + author = {Taquet, Maxime and Luciano, Sierra and Geddes, John R and Harrison, Paul J}, + date = {2020-08-16}, + institution = {{Psychiatry and Clinical Psychology}}, + doi = {10.1101/2020.08.14.20175190}, + abstract = {Background: Adverse mental health consequences of COVID-19, including anxiety and depression, have been widely predicted but not yet accurately measured. There are a range of physical health risk factors for COVID-19, but it is not known if there are also psychiatric risk factors.}, + langid = {english}, + file = {/home/src/Papers/taquet et al_2020_bidirectional associations between covid-19 and psychiatric disorder.pdf} +} + +@article{taskerWhyEveryoneShould2017, + title = {Why Everyone Should Care about “{{Computable Phenotypes}}”}, + author = {Tasker, Robert C.}, + date = {2017-05}, + journaltitle = {Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies}, + shortjournal = {Pediatr Crit Care Med}, + volume = {18}, + number = {5}, + eprint = {28475533}, + eprinttype = {pmid}, + pages = {489--490}, + issn = {1529-7535}, + doi = {10.1097/PCC.0000000000001115}, + pmcid = {PMC5421390}, + file = {/home/src/Papers/tasker_2017_why everyone should care about “computable phenotypes”.pdf} +} + +@inproceedings{taylorAutomaticIdentificationArtifacts2015, + title = {Automatic Identification of Artifacts in Electrodermal Activity Data}, + booktitle = {2015 37th {{Annual International Conference}} of the {{IEEE Engineering}} in {{Medicine}} and {{Biology Society}} ({{EMBC}})}, + author = {Taylor, Sara and Jaques, Natasha and {Weixuan Chen} and Fedor, Szymon and Sano, Akane and Picard, Rosalind}, + date = {2015-08}, + pages = {1934--1937}, + publisher = {{IEEE}}, + location = {{Milan}}, + doi = {10.1109/EMBC.2015.7318762}, + abstract = {Recently, wearable devices have allowed for long term, ambulatory measurement of electrodermal activity (EDA). Despite the fact that ambulatory recording can be noisy, and recording artifacts can easily be mistaken for a physiological response during analysis, to date there is no automatic method for detecting artifacts. This paper describes the development of a machine learning algorithm for automatically detecting EDA artifacts, and provides an empirical evaluation of classification performance. We have encoded our results into a freely available web-based tool for artifact and peak detection.}, + eventtitle = {2015 37th {{Annual International Conference}} of the {{IEEE Engineering}} in {{Medicine}} and {{Biology Society}} ({{EMBC}})}, + isbn = {978-1-4244-9271-8}, + langid = {english}, + file = {/home/src/Offline/Papers/taylor et al_2015_automatic identification of artifacts in electrodermal activity data.pdf} +} + +@online{TelemedicineWashingtonDC, + title = {About Telemedicine. {{Washington}}, {{DC}}: {{American Telemedicine Association}}}, + url = {https://www.americantelemed.org/main/about/%20about-telemedicine/telemedicine-faqs}, + urldate = {2022-05-02}, + abstract = {American Telemedicine Association} +} + +@article{teller2010system, + title = {System for Monitoring Health, Wellness and Fitness}, + author = {Teller, Eric and Stivoric, John M and Kasabach, Christopher D and Pacione, Christopher D and Moss, John L and Liden, Craig B and McCormack, Margaret A}, + date = {2010-03-30}, + publisher = {{Google Patents}} +} + +@inproceedings{terrySocialNetUsing, + title = {Social {{Net}}: {{Using Patterns}} of {{Physical Proximity Over Time}} to {{Infer Shared Interests}}}, + booktitle = {{{CHI}}'02 Extended Abstracts on {{Human}} Factors in Computing Systems}, + author = {Terry, Michael and Mynatt, Elizabeth D and Ryall, Kathy and Leigh, Darren}, + abstract = {We describe Social Net, a novel interest-matching application that uses patterns of collocation, over time, to infer shared interests between users. Social Net demonstrates new possibilities and methods for using the capabilities of mobile devices equipped with RFcommunications.}, + langid = {english}, + file = {/home/src/Offline/Papers/terry et al_social net.pdf} +} + +@article{teutschMovingObjectDetection2017, + title = {Moving Object Detection in Top-View Aerial Videos Improved by Image Stacking}, + author = {Teutsch, Michael and Krüger, Wolfgang and Beyerer, Jürgen}, + date = {2017-08-16}, + journaltitle = {Optical Engineering}, + shortjournal = {Opt. Eng}, + volume = {56}, + number = {08}, + pages = {1}, + issn = {0091-3286}, + doi = {10.1117/1.OE.56.8.083102}, + langid = {english}, + file = {/home/src/Offline/Papers/teutsch et al_2017_moving object detection in top-view aerial videos improved by image stacking.pdf} +} + +@book{thaler2009nudge, + title = {Nudge: {{Improving}} Decisions about Health, Wealth, and Happiness}, + author = {Thaler, Richard H and Sunstein, Cass R}, + date = {2009}, + publisher = {{Penguin}} +} + +@online{theapachesoftwarefoundationApacheArrow, + title = {Apache {{Arrow}}}, + author = {{The Apache Software Foundation}}, + url = {https://arrow.apache.org/}, + urldate = {2020-12-07}, + abstract = {A cross-language development platform for in-memory analytics}, + langid = {american}, + organization = {{Apache Arrow}}, + file = {/home/cedarprince/Zotero/storage/MI74ZVWK/arrow.apache.org.html} +} + +@online{thecenterfordiscoveryCenterDiscovery, + title = {The {{Center For Discovery}}}, + author = {{The Center For Discovery}}, + url = {https://thecenterfordiscovery.org/}, + urldate = {2020-04-28}, + abstract = {At The Center for Discovery, what happens here matters everywhere.}, + langid = {american}, + organization = {{The Center For Discovery}}, + file = {/home/cedarprince/Zotero/storage/L2GLPDPR/about-us.html} +} + +@report{thewhitehousePresidentBidenAnnounces2021, + title = {President {{Biden Announces Members}} of the {{Biden-Harris Administration COVID-19 Health Equity Task Force}}}, + author = {{The White House}}, + date = {2021-02-10}, + institution = {{The White House}}, + location = {{Washington DC}}, + url = {https://www.whitehouse.gov/briefing-room/press-briefings/2021/02/10/president-biden-announces-members-of-the-biden-harris-administration-covid-19-health-equity-task-force/}, + urldate = {2021-05-20} +} + +@article{thompson2014supports, + title = {How the Supports Paradigm Is Transforming the Developmental Disabilities Service System}, + author = {Thompson, James R and Schalock, Robert L and Agosta, John and Teninty, Lilia and Fortune, Jon}, + date = {2014}, + journaltitle = {Inclusion}, + volume = {2}, + number = {2}, + pages = {86--99}, + publisher = {{The American Association on Intellectual and Developmental Disabilities}} +} + +@article{thompsonReflectionsTrustingTrust1984, + title = {Reflections on Trusting Trust}, + author = {Thompson, Ken}, + date = {1984-08-01}, + journaltitle = {Communications of the ACM}, + shortjournal = {Commun. ACM}, + volume = {27}, + number = {8}, + pages = {761--763}, + issn = {0001-0782}, + doi = {10.1145/358198.358210}, + abstract = {To what extent should one trust a statement that a program is free of Trojan horses? Perhaps it is more important to trust the people who wrote the software.}, + keywords = {_tablet}, + file = {/Users/jzelko3/Knowledgebase/Papers/Thompson_1984_Reflections on trusting trust.pdf} +} + +@online{thorburnUsingAnkiMathematics2020, + title = {Using {{Anki}} for Mathematics}, + author = {Thorburn, Luke}, + date = {2020-03-08}, + url = {https://www.lukethorburn.com/anki/}, + urldate = {2023-01-09} +} + +@article{thorpe1996speed, + title = {Speed of Processing in the Human Visual System}, + author = {Thorpe, Simon and Fize, Denis and Marlot, Catherine}, + date = {1996}, + journaltitle = {nature}, + volume = {381}, + number = {6582}, + pages = {520--522}, + publisher = {{Nature Publishing Group}} +} + +@article{thorpe2001seeking, + title = {Seeking Categories in the Brain}, + author = {Thorpe, Simon J and Fabre-Thorpe, Michele}, + date = {2001}, + journaltitle = {Science}, + volume = {291}, + number = {5502}, + pages = {260--263}, + publisher = {{American Association for the Advancement of Science}} +} + +@article{tibbetts2021week, + title = {A Week during {{COVID-19}}: {{Online}} Social Interactions Predict Greater Connection and More Stress}, + author = {Tibbetts, Maureen and Esptein-Shuman, Adam and Kushlev, Kostadin}, + date = {2021}, + publisher = {{PsyArXiv}} +} + +@article{tom2015innovative, + title = {Innovative Technological Approach to {{Ebola}} Virus Disease Outbreak Response in {{Nigeria}} Using the Open Data Kit and Form Hub Technology}, + author = {Tom-Aba, Daniel and Olaleye, Adeniyi and Olayinka, Adebola Tolulope and Nguku, Patrick and Waziri, Ndadilnasiya and Adewuyi, Peter and Adeoye, Olawunmi and Oladele, Saliu and Adeseye, Aderonke and Oguntimehin, Olukayode and others}, + date = {2015}, + journaltitle = {PloS one}, + volume = {10}, + number = {6}, + pages = {e0131000}, + publisher = {{Public Library of Science San Francisco, CA USA}} +} + +@unpublished{tongCombatingHumanTrafficking2017, + title = {Combating {{Human Trafficking}} with {{Deep Multimodal Models}}}, + author = {Tong, Edmund and Zadeh, Amir and Jones, Cara and Morency, Louis-Philippe}, + date = {2017-05-07}, + shortjournal = {ArXiv170502735 Cs}, + eprint = {1705.02735}, + eprinttype = {arxiv}, + primaryclass = {cs}, + url = {http://arxiv.org/abs/1705.02735}, + urldate = {2019-04-28}, + abstract = {Human trafficking is a global epidemic affecting millions of people across the planet. Sex trafficking, the dominant form of human trafficking, has seen a significant rise mostly due to the abundance of escort websites, where human traffickers can openly advertise among at-will escort advertisements. In this paper, we take a major step in the automatic detection of advertisements suspected to pertain to human trafficking. We present a novel dataset called Trafficking-10k, with more than 10,000 advertisements annotated for this task. The dataset contains two sources of information per advertisement: text and images. For the accurate detection of trafficking advertisements, we designed and trained a deep multimodal model called the Human Trafficking Deep Network (HTDN).}, + archiveprefix = {arXiv}, + langid = {english}, + keywords = {carnegie-mellon,complab,human-trafficking,multimodal-learning,read}, + file = {/home/src/Offline/Papers/tong et al_2017_combating human trafficking with deep multimodal models.pdf} +} + +@article{torfiTEXTINDEPENDENTSPEAKERVERIFICATION2017, + title = {{{TEXT-INDEPENDENT SPEAKER VERIFICATION USING 3D CONVOLUTIONAL NEURAL NETWORKS}}}, + author = {Torfi, Amirsina and Dawson, Jeremy and Nasrabadi, Nasser}, + date = {2017}, + journaltitle = {arXiv}, + file = {/home/src/Offline/Papers/torfi et al_2017_text-independent speaker verification using 3d convolutional neural networks.pdf} +} + +@online{TreatmentsAutism, + title = {Treatments for {{Autism}}}, + url = {https://www.autismspeaks.org/treatments-autism}, + urldate = {2020-02-11}, + langid = {english}, + organization = {{Autism Speaks}}, + file = {/home/cedarprince/Zotero/storage/4J7JC5IR/treatments-autism.html} +} + +@article{tronstad2010study, + title = {A Study on Electrode Gels for Skin Conductance Measurements}, + author = {Tronstad, Christian and Johnsen, Gorm Krogh and Grimnes, Sverre and Martinsen, Ørjan G}, + date = {2010}, + journaltitle = {Physiological measurement}, + shortjournal = {Physiol. Meas.}, + volume = {31}, + number = {10}, + pages = {1395}, + publisher = {{IOP Publishing}} +} + +@article{troxler1804disappearance, + title = {On the Disappearance of given Objects from Our Visual Field}, + author = {Troxler, D}, + date = {1804}, + journaltitle = {Ophthalmologische Bibliothek}, + shortjournal = {Ophthalmol. Bibl.}, + volume = {2}, + pages = {1--53} +} + +@book{trudeauIntroductionGraphTheory1994, + title = {Introduction to {{Graph Theory}}}, + author = {Trudeau, Richard}, + date = {1994}, + edition = {Dover}, + publisher = {{DOVER PUBLICATIONS, INC.}}, + keywords = {_tablet}, + file = {/home/src/Papers/trudeau_1994_introduction to graph theory.epub} +} + +@report{tucksonTelehealth2017, + title = {Telehealth}, + author = {Tuckson, Reed and Edmunds, Margo and Hodgkins, Michael}, + date = {2017-10-19}, + institution = {{New England Journal of Medicine}}, + url = {https://www.nejm.org/doi/pdf/10.1056/NEJMsr1503323?articleTools=true}, + urldate = {2022-04-29}, + file = {/Users/jzelko3/Knowledgebase/Papers/Tuckson et al_2017_Telehealth.pdf} +} + +@article{turkIntellectualDevelopmentalDisability2020, + title = {Intellectual and Developmental Disability and {{COVID-19}} Case-Fatality Trends: {{TriNetX}} Analysis}, + shorttitle = {Intellectual and Developmental Disability and {{COVID-19}} Case-Fatality Trends}, + author = {Turk, Margaret A. and Landes, Scott D. and Formica, Margaret K. and Goss, Katherine D.}, + date = {2020-05}, + journaltitle = {Disability and Health Journal}, + shortjournal = {Disability and Health Journal}, + pages = {100942}, + issn = {19366574}, + doi = {10.1016/j.dhjo.2020.100942}, + abstract = {Background: Despite possibly higher risk of severe outcomes from COVID-19 among people with intellectual and developmental disabilities (IDD), there has been limited reporting of COVID-19 trends for this population. Objective: To compare COVID-19 trends among people with and without IDD, overall and stratified by age. Methods: Data from the TriNetX COVID-19 Research Network platform was used to identify COVID-19 patients. Analysis focused on trends in comorbidities, number of cases, number of deaths, and casefatality rate among patients with and without IDD who had a positive diagnosis for COVID-19 through May 14, 2020. Results: People with IDD had higher prevalence of specific comorbidities associated with poorer COVID19 outcomes. Distinct age-related differences in COVID-19 trends were present among those with IDD, with a higher concentration of COVID-19 cases at younger ages. In addition, while the overall casefatality rate was similar for those with IDD (5.1\%) and without IDD (5.4\%), these rates differed by age: ages 17 e IDD 1.6\%, without IDD {$<$}0.01\%; ages 18e74 e IDD 4.5\%, without IDD 2.7\%; ages 75e IDD 21.1\%, without IDD, 20.7\%. Conclusions: Though of concern for all individuals, COVID-19 appears to present a greater risk to people with IDD, especially at younger ages. Future research should seek to document COVID-19 trends among people with IDD, with particular attention to age related trends.}, + langid = {english}, + file = {/home/src/Papers/turk et al_2020_intellectual and developmental disability and covid-19 case-fatality trends.pdf} +} + +@article{turner2004ace2, + title = {{{ACE2}}: From Vasopeptidase to {{SARS}} Virus Receptor}, + author = {Turner, Anthony J and Hiscox, Julian A and Hooper, Nigel M}, + date = {2004}, + journaltitle = {Trends in pharmacological sciences}, + shortjournal = {Trends Pharmacol. Sci.}, + volume = {25}, + number = {6}, + pages = {291--294}, + publisher = {{Elsevier}} +} + +@article{twenge2019trends, + title = {Trends in {{US Adolescents}}’ Media Use, 1976–2016: {{The}} Rise of Digital Media, the Decline of {{TV}}, and the (near) Demise of Print.}, + author = {Twenge, Jean M and Martin, Gabrielle N and Spitzberg, Brian H}, + date = {2019}, + journaltitle = {Psychology of Popular Media Culture}, + shortjournal = {Psychol. Pop. Media Cult.}, + volume = {8}, + number = {4}, + pages = {329}, + publisher = {{Educational Publishing Foundation}} +} + +@article{twenge2020increases, + title = {Why Increases in Adolescent Depression May Be Linked to the Technological Environment}, + author = {Twenge, Jean M}, + date = {2020}, + journaltitle = {Current opinion in psychology}, + shortjournal = {Curr. Opin. Psychol.}, + volume = {32}, + pages = {89--94}, + publisher = {{Elsevier}} +} + +@article{twengeUnderestimatingDigitalMedia2020, + title = {Underestimating Digital Media Harm}, + author = {Twenge, Jean M. and Haidt, Jonathan and Joiner, Thomas E. and Campbell, W. Keith}, + date = {2020-04}, + journaltitle = {Nature Human Behaviour}, + shortjournal = {Nat Hum Behav}, + volume = {4}, + number = {4}, + pages = {346--348}, + issn = {2397-3374}, + doi = {10.1038/s41562-020-0839-4}, + langid = {english}, + file = {/home/src/Offline/Papers/twenge et al_2020_underestimating digital media harm.pdf} +} + +@article{twengeWhyIncreasesAdolescent2020, + title = {Why Increases in Adolescent Depression May Be Linked to the Technological Environment}, + author = {Twenge, Jean M}, + date = {2020}, + journaltitle = {Current Opinion in Psychology}, + shortjournal = {Curr. Opin. Psychol.}, + pages = {6}, + langid = {english}, + file = {/home/src/Offline/Papers/twenge_2020_why increases in adolescent depression may be linked to the technological.pdf} +} + +@misc{u.s.foodanddrugadministrationRealWorldEvidence2021, + title = {Real-{{World Evidence}}}, + author = {{U.S. Food and Drug Administration}}, + date = {2021-09-30}, + url = {https://www.fda.gov/science-research/science-and-research-special-topics/real-world-evidence}, + urldate = {2021-10-27}, + file = {/Users/jzelko3/Knowledgebase/Papers/U.S. Food and Drug Administration_2021_Real-World Evidence.pdf} +} + +@online{u.s.nationallibraryofmedicineCognitiveTestingMedlinePlus, + title = {Cognitive {{Testing}}: {{MedlinePlus Lab Test Information}}}, + shorttitle = {Cognitive {{Testing}}}, + author = {{U.S. National Library of Medicine}}, + url = {https://medlineplus.gov/lab-tests/cognitive-testing/}, + urldate = {2019-09-29}, + abstract = {Cognitive testing uses a series of questions and simple tasks to find out if you have cognitive impairment. Cognitive impairment is a problem with memory and/or other mental functions. Learn more.}, + langid = {english}, + file = {/home/src/Offline/Papers/u.s. national library of medicine_cognitive testing.pdf} +} + +@misc{u.s.preventiveservicestaskforceCognitiveImpairmentOlder2014, + title = {Cognitive {{Impairment}} in {{Older Adults}}: {{Screening}}}, + author = {{U.S. Preventive Services Task Force}}, + date = {2014-03-25}, + publisher = {{U.S. Preventive Services Task Force}}, + url = {https://www.uspreventiveservicestaskforce.org/Page/Document/RecommendationStatementFinal/cognitive-impairment-in-older-adults-screening}, + langid = {english}, + file = {/home/src/Offline/Papers/u.s. preventive services task force_2014_cognitive impairment in older adults.pdf} +} + +@report{UnderstandingMedicalLicensure2013, + title = {Understanding the {{Medical Licensure Compact}}}, + date = {2013}, + institution = {{Federation of State Medical Boards}}, + url = {http://www.fsmb.org/policy/advocacy-policy/interstate-model-proposed-medical-lic}, + urldate = {2022-05-02} +} + +@online{unitedstatescensusbureauPopulationClock, + title = {Population {{Clock}}}, + author = {{United States Census Bureau}}, + url = {https://www.census.gov/popclock/}, + urldate = {2021-06-18} +} + +@article{ursano2014army, + title = {The {{Army}} Study to Assess Risk and Resilience in Servicemembers ({{Army STARRS}})}, + author = {Ursano, Robert J and Colpe, Lisa J and Heeringa, Steven G and Kessler, Ronald C and Schoenbaum, Michael and Stein, Murray B and Collaborators, Army STARRS}, + date = {2014}, + journaltitle = {Psychiatry: Interpersonal and Biological Processes}, + shortjournal = {Psychiatry Interpers. Biol. Process.}, + volume = {77}, + number = {2}, + pages = {107--119}, + publisher = {{Guilford Press}} +} + +@online{USDAERSDocumentation, + title = {{{USDA ERS}} - {{Documentation}}}, + url = {https://www.ers.usda.gov/data-products/rural-urban-continuum-codes/documentation/}, + urldate = {2021-06-10} +} + +@online{uspreventiveservicestaskforceFinalRecommendationStatement, + title = {Final {{Recommendation Statement}}: {{Cognitive Impairment}} in {{Older Adults}}: {{Screening}}}, + author = {{Us Preventive Services Task Force}}, + url = {https://www.uspreventiveservicestaskforce.org/Page/Document/RecommendationStatementFinal/cognitive-impairment-in-older-adults-screening}, + urldate = {2019-12-01}, + file = {/home/cedarprince/Zotero/storage/KYCA2CI8/cognitive-impairment-in-older-adults-screening.html} +} + +@article{valderramaOpenSourceAutocorrelationbased2019, + title = {An Open Source Autocorrelation-Based Method for Fetal Heart Rate Estimation from One-Dimensional {{Doppler}} Ultrasound}, + author = {Valderrama, Camilo E and Stroux, Lisa and Katebi, Nasim and Paljug, Elianna and Hall-Clifford, Rachel and Rohloff, Peter and Marzbanrad, Faezeh and Clifford, Gari D}, + date = {2019-02-26}, + journaltitle = {Physiological Measurement}, + shortjournal = {Physiol. Meas.}, + volume = {40}, + number = {2}, + pages = {025005}, + issn = {1361-6579}, + doi = {10.1088/1361-6579/ab033d}, + abstract = {Objective: Open research on fetal heart rate (FHR) estimation is relatively rare, and evidence for the utility of metrics derived from Doppler ultrasound devices has historically remained hidden in the proprietary documentation of commercial entities, thereby inhibiting its assessment and improvement. Nevertheless, recent studies have attempted to improve FHR estimation; however, these methods were developed and tested using datasets composed of few subjects and are therefore unlikely to be generalizable on a population level. The work presented here introduces a reproducible and generalizable autocorrelation (AC)-based method for FHR estimation from onedimensional Doppler ultrasound (1D-DUS) signals.}, + langid = {english}, + keywords = {cliffordlab}, + file = {/home/cedarprince/Zotero/storage/SD3AHQTG/Valderrama et al. - 2019 - An open source autocorrelation-based method for fe.pdf;/home/src/Offline/Papers/valderrama et al_2019_an open source autocorrelation-based method for fetal heart rate estimation.pdf} +} + +@article{valderramaTemplatebasedQualityAssessment2017, + title = {Template-Based {{Quality Assessment}} of the {{Doppler Ultrasound Signal}} for {{Fetal Monitoring}}}, + author = {Valderrama, Camilo E. and Marzbanrad, Faezeh and Stroux, Lisa and Clifford, Gari D.}, + date = {2017-07-18}, + journaltitle = {Frontiers in Physiology}, + shortjournal = {Front. Physiol.}, + volume = {8}, + pages = {511}, + issn = {1664-042X}, + doi = {10.3389/fphys.2017.00511}, + langid = {english}, + keywords = {cliffordlab}, + file = {/home/src/Offline/Papers/valderrama et al_2017_template-based quality assessment of the doppler ultrasound signal for fetal.pdf} +} + +@article{vallance1997infection, + title = {Infection, Inflammation, and Infarction: Does Acute Endothelial Dysfunction Provide a Link?}, + author = {Vallance, Patrick and Collier, Joe}, + date = {1997}, + journaltitle = {The Lancet}, + volume = {349}, + number = {9062}, + pages = {1391--1392}, + publisher = {{Elsevier Science Publishing Company, Inc.}} +} + +@article{van2012emotional, + title = {Emotional Sweating across the Body: {{Comparing}} 16 Different Skin Conductance Measurement Locations}, + author = {van Dooren, Marieke and Janssen, Joris H and others}, + options = {useprefix=true}, + date = {2012}, + journaltitle = {Physiology \& behavior}, + shortjournal = {Physiol. Behav.}, + volume = {106}, + number = {2}, + pages = {298--304}, + publisher = {{Elsevier}} +} + +@article{van2017introduction, + title = {Introduction: The Politics of Whiteness in {{Africa}}}, + author = {van Zyl-Hermann, Danelle and Boersema, Jacob}, + options = {useprefix=true}, + date = {2017}, + journaltitle = {Africa}, + volume = {87}, + number = {4}, + pages = {651--661}, + publisher = {{Cambridge University Press}} +} + +@article{van2020covid, + title = {{{COVID-19}} Exacerbating Inequalities in the {{US}}}, + author = {van Dorn, Aaron and Cooney, Rebecca E and Sabin, Miriam L}, + options = {useprefix=true}, + date = {2020}, + journaltitle = {Lancet (London, England)}, + shortjournal = {Lancet Lond. Engl.}, + volume = {395}, + number = {10232}, + pages = {1243}, + publisher = {{Elsevier}} +} + +@article{van2020essential, + title = {Essential Long-Term Care Workers Commonly Hold Second Jobs and Double-or Triple-Duty Caregiving Roles}, + author = {Van Houtven, Courtney Harold and DePasquale, Nicole and Coe, Norma B}, + date = {2020}, + journaltitle = {Journal of the American Geriatrics Society}, + shortjournal = {J. Am. Geriatr. Soc.}, + publisher = {{Wiley Online Library}} +} + +@article{vancampfort2017sedentary, + title = {Sedentary Behavior and Physical Activity Levels in People with Schizophrenia, Bipolar Disorder and Major Depressive Disorder: A Global Systematic Review and Meta-Analysis}, + author = {Vancampfort, Davy and Firth, Joseph and Schuch, Felipe B and Rosenbaum, Simon and Mugisha, James and Hallgren, Mats and Probst, Michel and Ward, Philip B and Gaughran, Fiona and De Hert, Marc and others}, + date = {2017}, + journaltitle = {World Psychiatry}, + volume = {16}, + number = {3}, + pages = {308--315}, + publisher = {{Wiley Online Library}}, + keywords = {\#nosource} +} + +@article{vanni1997modulation, + title = {Modulation of the Parieto-Occipital Alpha Rhythm during Object Detection}, + author = {Vanni, Simo and Revonsuo, Antti and Hari, Riitta}, + date = {1997}, + journaltitle = {Journal of Neuroscience}, + shortjournal = {J. Neurosci.}, + volume = {17}, + number = {18}, + pages = {7141--7147}, + publisher = {{Soc Neuroscience}} +} + +@online{venkataramakrishnanContacttracingAppsMust2020, + title = {Contact-Tracing Apps Must Not Be Used for Mass Surveillance, Warn Experts}, + author = {Venkataramakrishnan, Siddharth}, + date = {2020-04-20T14:59:35}, + url = {https://www.ft.com/content/074fa83b-1b95-47ba-86d2-4b71dafe3425}, + urldate = {2020-11-09}, + abstract = {Letter from nearly 300 academics argues against a rapid rollout that could undermine public trust}, + langid = {british}, + file = {/home/cedarprince/Zotero/storage/7263AYSC/074fa83b-1b95-47ba-86d2-4b71dafe3425.html} +} + +@article{vergheseHowTechCan2018, + title = {How {{Tech Can Turn Doctors Into Clerical Workers}}}, + author = {Verghese, Abraham}, + date = {2018-05-16}, + journaltitle = {The New York Times}, + issn = {0362-4331}, + url = {https://www.nytimes.com/interactive/2018/05/16/magazine/health-issue-what-we-lose-with-data-driven-medicine.html, https://www.nytimes.com/interactive/2018/05/16/magazine/health-issue-what-we-lose-with-data-driven-medicine.html}, + urldate = {2018-05-23}, + abstract = {The threat that electronic health records and machine learning pose to physicians’ clinical judgment — and their well-being.}, + entrysubtype = {newspaper}, + journalsubtitle = {Magazine}, + langid = {american}, + keywords = {artificial-intelligence,biomedical-informatics,human-centered-ai,medicine}, + file = {/home/cedarprince/Zotero/storage/5LYY3UC9/health-issue-what-we-lose-with-data-driven-medicine.html} +} + +@article{VinelandAdaptiveBehavior, + title = {Vineland {{Adaptive Behavior Scales}} - {{Second Edition}} ({{Vineland-II}})}, + pages = {6}, + langid = {english}, + file = {/home/src/Offline/Papers/vineland adaptive behavior scales - second edition (vineland-ii).pdf} +} + +@article{von2001effects, + title = {Effects of Psychological Stress and Psychiatric Disorders on Blood Coagulation and Fibrinolysis: A Biobehavioral Pathway to Coronary Artery Disease?}, + author = {von Känel, Roland and Mills, Paul J and Fainman, Claudia and Dimsdale, Joel E}, + options = {useprefix=true}, + date = {2001}, + journaltitle = {Psychosomatic medicine}, + shortjournal = {Psychosom. Med.}, + volume = {63}, + number = {4}, + pages = {531--544}, + publisher = {{LWW}} +} + +@article{vrijkotte1999work, + title = {Work Stress and Metabolic and Hemostatic Risk Factors}, + author = {Vrijkotte, Tanja GM and Van Doornen, Lorenz JP and De Geus, Eco JC}, + date = {1999}, + journaltitle = {Psychosomatic medicine}, + shortjournal = {Psychosom. Med.}, + volume = {61}, + number = {6}, + pages = {796--805}, + publisher = {{LWW}} +} + +@online{w3cRDFConceptsAbstract, + title = {{{RDF}} 1.1 {{Concepts}} and {{Abstract Syntax}}}, + author = {{W3C}}, + url = {https://www.w3.org/TR/rdf11-concepts/}, + urldate = {2022-02-18}, + file = {/home/cedarprince/Zotero/storage/PUBTPR98/rdf11-concepts.html} +} + +@article{wade2014clinician, + title = {Clinician Acceptance Is the Key Factor for Sustainable Telehealth Services}, + author = {Wade, Victoria A and Eliott, Jaklin A and Hiller, Janet E}, + date = {2014}, + journaltitle = {Qualitative health research}, + shortjournal = {Qual. Health Res.}, + volume = {24}, + number = {5}, + pages = {682--694}, + publisher = {{Sage Publications Sage CA: Los Angeles, CA}} +} + +@article{wade2014uptake, + title = {Uptake of Telehealth Services Funded by {{Medicare}} in {{Australia}}}, + author = {Wade, Victoria and Soar, Jeffrey and Gray, Len}, + date = {2014}, + journaltitle = {Australian Health Review}, + shortjournal = {Aust. Health Rev.}, + volume = {38}, + number = {5}, + pages = {528--532}, + publisher = {{CSIRO Publishing}} +} + +@article{wagenaar1986my, + title = {My Memory: {{A}} Study of Autobiographical Memory over Six Years}, + author = {Wagenaar, Willem A}, + date = {1986}, + journaltitle = {Cognitive psychology}, + shortjournal = {Cognit. Psychol.}, + volume = {18}, + number = {2}, + pages = {225--252}, + publisher = {{Elsevier}} +} + +@article{wainer1996depicting, + title = {Depicting Error}, + author = {Wainer, Howard}, + date = {1996}, + journaltitle = {The American Statistician}, + shortjournal = {Am. Stat.}, + volume = {50}, + number = {2}, + pages = {101--111}, + publisher = {{Taylor \& Francis}}, + file = {/home/src/Papers/wainer_1996_depicting error.pdf} +} + +@article{wardMildCognitiveImpairment2012, + title = {Mild Cognitive Impairment: {{Disparity}} of Incidence and Prevalence Estimates}, + shorttitle = {Mild Cognitive Impairment}, + author = {Ward, Alex and Arrighi, H. Michael and Michels, Shannon and Cedarbaum, Jesse M.}, + date = {2012-01}, + journaltitle = {Alzheimer's \& Dementia}, + shortjournal = {Alzheimer's \& Dementia}, + volume = {8}, + number = {1}, + pages = {14--21}, + issn = {15525260}, + doi = {10.1016/j.jalz.2011.01.002}, + abstract = {Background: The purpose of conducting this study was to identify areas of concordance and sources of variation for the published rates of prevalence and incidence associated with various definitions for mild cognitive impairment (MCI). Methods: The study used systematic review of studies published in English since 1984. Studies were identified by searching MEDLINE and EMBASE databases. Population-based observational studies of incidence or prevalence of MCI and related terms were eligible for inclusion. Results: A total of 3,705 citations were identified, and 42 were accepted for inclusion; 35 included data on prevalence and 13 on incidence. The following four terms predominated: age-associated memory impairment (AAMI); cognitive impairment no dementia (CIND); MCI; and amnestic MCI (aMCI). Within each term, the operational definition varied. Substantial variation was observed for both incidence (MCI: 21.5–71.3; aMCI: 8.5–25.9 per 1,000 person-years) and prevalence of each definition of cognitive impairment (AAMI 3.6\%–38.4\%; CIND 5.1\%–35.9\%; MCI 3\%–42\%; aMCI 0.5\%–31.9\%). CIND and MCI showed increasing prevalence among older age groups, whereas agespecific rates of aMCI were lower and without any apparent age relationship. Conclusions: Prevalence and incidence estimates associated with MCI vary greatly both between definitions and within a definition across the 42 publications. These wide differences pose a significant challenge to our understanding of the social burden of this disease. Enhancement and standardization of operational definitions of the subtypes of cognitive impairment could improve estimates of disease burden and provide a mechanism to assist in the identification of individuals at risk for future Alzheimer’s disease and other dementias.}, + langid = {english}, + file = {/home/src/Offline/Papers/ward et al_2012_mild cognitive impairment.pdf} +} + +@article{warrenRuralPublicHealth2014, + title = {Rural Public Health: {{Best}} Practices and Preventive Models}, + author = {Warren, Jacob and Smalley, K. Bryant}, + date = {2014}, + publisher = {{Springer Publishing Company}}, + isbn = {0826108946} +} + +@online{WearableGSRSensor, + title = {Wearable {{GSR Sensor}} | {{Shimmer Galvanic Skin Response Sensor}} | {{EDA}} Sensor}, + url = {https://www.shimmersensing.com/products/shimmer3-wireless-gsr-sensor}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/E2RKDRF6/shimmer3-wireless-gsr-sensor.html} +} + +@article{wechsler1997wechsler, + title = {Wechsler Adult Intelligence Scale—3rd Ed.({{WAIS-3}}®)}, + author = {Wechsler, D}, + date = {1997}, + publisher = {{San Antonio, TX: Harcourt Assessment}}, + keywords = {\#nosource} +} + +@inbook{wenzelWorldHealthOrganization2017, + title = {World {{Health Organization Disability Assessment Schedule}} 2.0}, + booktitle = {The {{SAGE Encyclopedia}} of {{Abnormal}} and {{Clinical Psychology}}}, + date = {2017}, + publisher = {{SAGE Publications, Inc.}}, + location = {{2455 Teller Road,~Thousand Oaks,~California~91320}}, + doi = {10.4135/9781483365817.n1493}, + bookauthor = {Wenzel, Amy}, + isbn = {978-1-4833-6583-1 978-1-4833-6581-7}, + langid = {english}, + keywords = {schizophrenia}, + file = {/home/src/Offline/Papers/2017_world health organization disability assessment schedule 2.pdf} +} + +@patent{werbAssetPersonnelTagging2004, + type = {patentus}, + title = {Asset and Personnel Tagging System Utilizing {{GPS}}}, + author = {Werb, Jay and Underriner, Kevin and Long, Martin}, + holder = {{RF Technologies Inc}}, + date = {2004-03-02}, + number = {6700533B1}, + url = {https://patents.google.com/patent/US6700533B1/en}, + urldate = {2020-04-21}, + keywords = {base station,gps,signal,system,tag}, + file = {/home/src/Offline/Papers/werb et al_2004_asset and personnel tagging system utilizing gps.pdf} +} + +@video{wesmckinneyApacheArrowFuture2020, + title = {Apache {{Arrow}} and the {{Future}} of {{Data Frames}}}, + editor = {{Wes McKinney}}, + date = {2020}, + url = {https://www.youtube.com/watch?v=fyj4FyH3XdU&t=281s}, + editortype = {director} +} + +@article{wettsteinIdentifyingMobilityTypes2013, + title = {Identifying {{Mobility Types}} in {{Cognitively Heterogeneous Older Adults Based}} on {{GPS-Tracking}}: {{What Discriminates Best}}?}, + author = {Wettstein, Markus and Wahl, Hans-Werner and Shoval, Noam and Auslander, Gail K and Heinik, Jeremia}, + date = {2013}, + journaltitle = {Journal of Applied Gerontology}, + shortjournal = {J. Appl. Gerontol.}, + volume = {34}, + number = {8}, + file = {/home/src/Offline/Papers/wettstein et al_2013_identifying mobility types in cognitively heterogeneous older adults based on.pdf} +} + +@article{wettsteinOutofHomeBehaviorCognitive2012, + title = {Out-of-{{Home Behavior}} and {{Cognitive Impairment}} in {{Older Adults}}: {{Findings}} of the {{SenTra Project}}}, + author = {Wettstein, Markus and Wahl, Hans-Werner and Shoval, Noam and Oswald, Frank and Voss, Elke and Seidl, Ulrich and Frölich, Lutz and Auslander, Gail K and Heinik, Jeremia and Landau, Ruth}, + date = {2012}, + journaltitle = {Journal of Applied Gerontology}, + shortjournal = {J. Appl. Gerontol.}, + volume = {34}, + number = {1}, + file = {/home/src/Offline/Papers/wettstein et al_2012_out-of-home behavior and cognitive impairment in older adults.pdf} +} + +@online{WhatAutism, + title = {What {{Is Autism}}?}, + url = {https://www.autismspeaks.org/what-autism}, + urldate = {2020-02-11}, + abstract = {Autism, or autism spectrum disorder (ASD), refers to a broad range of conditions characterized by challenges with social skills, repetitive behaviors, speech and nonverbal communication. According to the Centers for Disease Control, autism affects an estimated 1 in 59 children in the United States today.}, + langid = {english}, + organization = {{Autism Speaks}}, + file = {/home/cedarprince/Zotero/storage/PSHLUAUN/what-autism.html} +} + +@online{WhenStateFails, + title = {When the {{State Fails}}: {{Maternal Mortality}} and {{Racial Disparity}} in {{Georgia}}}, + shorttitle = {When the {{State Fails}}}, + url = {https://law.yale.edu/yls-today/news/when-state-fails-maternal-mortality-and-racial-disparity-georgia}, + urldate = {2018-05-28}, + abstract = {The Global Health Justice Partnership released a report asserting that Georgia is failing its obligations to women by perpetuating a maternal mortality crisis disproportionally impacting Black women.}, + langid = {english}, + keywords = {african-american,discrimination,georgia,maternal-mortality,racism,us}, + file = {/home/jacob/Papers/When the State Fails Maternal Mortality and Racia.pdf;/home/cedarprince/Zotero/storage/8UCBC4E4/when-state-fails-maternal-mortality-and-racial-disparity-georgia.html} +} + +@online{WHODirectorGeneralOpening, + title = {{{WHO Director-General}}'s Opening Remarks at the Media Briefing on {{COVID-19}} - 11 {{March}} 2020}, + url = {https://www.who.int/dg/speeches/detail/who-director-general-s-opening-remarks-at-the-media-briefing-on-covid-19---11-march-2020}, + urldate = {2020-03-15}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/LYM2L95W/who-director-general-s-opening-remarks-at-the-media-briefing-on-covid-19---11-march-2020.html} +} + +@online{WHOMaternalMortality, + title = {{{WHO}} | {{Maternal}} Mortality and Morbidity in the {{United States}} of {{America}}}, + url = {http://www.who.int/bulletin/volumes/93/3/14-148627/en/}, + urldate = {2018-05-28}, + abstract = {article published in March 2015}, + organization = {{WHO}}, + keywords = {maternal-health,maternal-mortality,us}, + file = {/home/jacob/Papers/WHO Maternal mortality and morbidity in the Unit.pdf;/home/cedarprince/Zotero/storage/DUWFYG6V/en.html} +} + +@book{wickham2019advanced, + title = {Advanced r}, + author = {Wickham, Hadley}, + date = {2019}, + publisher = {{CRC press}} +} + +@article{widdowson1975review, + title = {A Review: New Thoughts on Growth}, + author = {Widdowson, EM and McCance, RA}, + date = {1975}, + journaltitle = {Pediatric Research}, + shortjournal = {Pediatr. Res.}, + volume = {9}, + number = {3}, + pages = {154--156}, + publisher = {{Nature Publishing Group}} +} + +@book{wiesel2006night, + title = {Night}, + author = {Wiesel, Elie}, + date = {2006}, + volume = {55}, + publisher = {{Macmillan}} +} + +@article{wiki:xxx, + title = {Connectogram — {{Wikipedia}}, the Free Encyclopedia}, + author = {{Wikipedia contributors}}, + date = {2020}, + url = {https://en.wikipedia.org/w/index.php?title=Connectogram&oldid=958351177}, + file = {/home/src/Papers/wikipedia contributors_2020_connectogram — wikipedia, the free encyclopedia.pdf} +} + +@article{wikipediacontributorsDynamicFunctionalConnectivity2020, + title = {Dynamic {{Functional Connectivity}} — {{Wikipedia}}, {{The Free Encyclopedia}}}, + author = {{Wikipedia contributors}}, + date = {2020}, + file = {/home/src/Papers/wikipedia contributors_2020_dynamic functional connectivity — wikipedia, the free encyclopedia.pdf} +} + +@inreference{wikipediacontributorsEventRelatedPotential2020, + title = {Event {{Related Potential}}}, + author = {{Wikipedia contributors}}, + date = {2020}, + langid = {english}, + keywords = {Evoked Potentials,Evoked potentials (Electrophysiology)}, + annotation = {OCLC: ocm57574045}, + file = {/home/src/Papers/wikipedia contributors_2020_event related potential.pdf} +} + +@book{wilde2006picture, + title = {The Picture of Dorian Gray}, + author = {Wilde, Oscar}, + date = {2006}, + publisher = {{OUP Oxford}} +} + +@book{wildePictureDorianGray2006, + title = {The {{Picture}} of {{Dorian Gray}}}, + author = {Wilde, Oscar and Bristow, Joseph}, + date = {2006}, + series = {Oxford World's Classics}, + edition = {New ed}, + publisher = {{Oxford University Press}}, + location = {{Oxford ; New York}}, + isbn = {978-0-19-280729-8}, + langid = {english}, + pagetotal = {229}, + keywords = {Appearance (Philosophy),Conduct of life,Didactic fiction,Fiction,Portraits}, + annotation = {OCLC: ocm68220894}, + file = {/home/src/Offline/Papers/wilde_bristow_2006_the picture of dorian gray.pdf} +} + +@article{wilhelm1996ambulatory, + title = {Ambulatory Assessment of Clinical Anxiety}, + author = {Wilhelm, Frank H and Roth, Walton T}, + date = {1996}, + journaltitle = {Ambulatory assessment: Computer-assisted psychological and psychophysiological methods in monitoring and field studies}, + shortjournal = {Ambul. Assess. Comput.-Assist. Psychol. Psychophysiological Methods Monit. Field Stud.}, + pages = {317--345} +} + +@article{wilhelm1998taking, + title = {Taking the Laboratory to the Skies: {{Ambulatory}} Assessment of Self-Report, Autonomic, and Respiratory Responses in Flying Phobia}, + author = {Wilhelm, Frank H and Roth, Walton T}, + date = {1998}, + journaltitle = {Psychophysiology}, + volume = {35}, + number = {5}, + pages = {596--606}, + publisher = {{Cambridge University Press}} +} + +@article{wilkinsonFAIRGuidingPrinciples2016, + title = {The {{FAIR Guiding Principles}} for Scientific Data Management and Stewardship}, + author = {Wilkinson, Mark D. and Dumontier, Michel and Aalbersberg, IJsbrand Jan and Appleton, Gabrielle and Axton, Myles and Baak, Arie and Blomberg, Niklas and Boiten, Jan-Willem and da Silva Santos, Luiz Bonino and Bourne, Philip E. and Bouwman, Jildau and Brookes, Anthony J. and Clark, Tim and Crosas, Mercè and Dillo, Ingrid and Dumon, Olivier and Edmunds, Scott and Evelo, Chris T. and Finkers, Richard and Gonzalez-Beltran, Alejandra and Gray, Alasdair J.G. and Groth, Paul and Goble, Carole and Grethe, Jeffrey S. and Heringa, Jaap and ’t Hoen, Peter A.C and Hooft, Rob and Kuhn, Tobias and Kok, Ruben and Kok, Joost and Lusher, Scott J. and Martone, Maryann E. and Mons, Albert and Packer, Abel L. and Persson, Bengt and Rocca-Serra, Philippe and Roos, Marco and van Schaik, Rene and Sansone, Susanna-Assunta and Schultes, Erik and Sengstag, Thierry and Slater, Ted and Strawn, George and Swertz, Morris A. and Thompson, Mark and van der Lei, Johan and van Mulligen, Erik and Velterop, Jan and Waagmeester, Andra and Wittenburg, Peter and Wolstencroft, Katherine and Zhao, Jun and Mons, Barend}, + options = {useprefix=true}, + date = {2016-12}, + journaltitle = {Scientific Data}, + shortjournal = {Sci Data}, + volume = {3}, + number = {1}, + pages = {160018}, + issn = {2052-4463}, + doi = {10.1038/sdata.2016.18}, + langid = {english}, + file = {/home/src/Papers/wilkinson et al_2016_the fair guiding principles for scientific data management and stewardship.pdf} +} + +@article{wilson2020these, + title = {These Graphs Show How {{COVID-19}} Is Ravaging {{New York City}}’s Low-Income Neighborhoods}, + author = {Wilson, C}, + date = {2020}, + journaltitle = {Time} +} + +@article{winbladMildCognitiveImpairment2004, + title = {Mild Cognitive Impairment - beyond Controversies, towards a Consensus: Report of the {{International Working Group}} on {{Mild Cognitive Impairment}}}, + shorttitle = {Mild Cognitive Impairment - beyond Controversies, towards a Consensus}, + author = {Winblad, B. and Palmer, K. and Kivipelto, M. and Jelic, V. and Fratiglioni, L. and Wahlund, L.-O. and Nordberg, A. and Backman, L. and Albert, M. and Almkvist, O. and Arai, H. and Basun, H. and Blennow, K. and de Leon, M. and DeCarli, C. and Erkinjuntti, T. and Giacobini, E. and Graff, C. and Hardy, J. and Jack, C. and Jorm, A. and Ritchie, K. and van Duijn, C. and Visser, P. and Petersen, R.C.}, + options = {useprefix=true}, + date = {2004-09}, + journaltitle = {Journal of Internal Medicine}, + shortjournal = {J Intern Med}, + volume = {256}, + number = {3}, + pages = {240--246}, + issn = {0954-6820, 1365-2796}, + doi = {10.1111/j.1365-2796.2004.01380.x}, + langid = {english}, + file = {/home/src/Offline/Papers/winblad et al_2004_mild cognitive impairment - beyond controversies, towards a consensus.pdf} +} + +@book{wisnerRiskNaturalHazards2014, + title = {At Risk: Natural Hazards, People's Vulnerability and Disasters}, + author = {Wisner, Ben and Blaikie, Piers and Cannon, Terry and Davis, Ian}, + date = {2014}, + publisher = {{Routledge}}, + isbn = {0-203-71477-6} +} + +@report{wong2021behavioral, + title = {The Behavioral Health of Minority Active Duty Service Members}, + author = {Wong, Eunice C and Meadows, Sarah O and Schell, Terry L and Chan, Wing Y and Jaycox, Lisa H and Osilla, Karen C and Schuler, Megan S and Roth, Elizabeth}, + date = {2021}, + institution = {{RAND CORP SANTA MONICA CA}} +} + +@article{wongCognitivePredictorsFiveyear2013, + title = {Cognitive Predictors for Five-Year Conversion to Dementia in Community-Dwelling {{Chinese}} Older Adults}, + author = {Wong, Candy H. Y. and Leung, Grace T. Y. and Fung, Ada W. T. and Chan, W. C. and Lam, Linda C. W.}, + date = {2013-07}, + journaltitle = {International Psychogeriatrics}, + shortjournal = {Int. Psychogeriatr.}, + volume = {25}, + number = {7}, + pages = {1125--1134}, + issn = {1041-6102, 1741-203X}, + doi = {10.1017/S1041610213000161}, + abstract = {Background: This study evaluates which cognitive measure is best for predicting incident dementia in a population-based random sample of Chinese older adults without dementia over a five-year period. Methods: A total of 787 community-dwelling Chinese older adults without dementia in Hong Kong were assessed at baseline (T0), at two years (T1), and at five years (T2). Results: The annual conversion rate to dementia was 1.6\% and 6.3\% for baseline normal participants and baseline mild cognitive impairment (MCI) participants, respectively. The Cantonese version of Mini-mental State Examination (CMMSE) scores declined significantly over time. In participants who progressed to dementia, Category Verbal Fluency Test (CVFT) scores dropped significantly from T0 to T1. A 1-SD drop of either CMMSE or CVFT in two years predicted dementia at five years with 91.5\% sensitivity and 62.0\% specificity. A stable CMMSE and CVFT at two years predicted a 91\% chance of not progressing to clinical dementia at five years. Conclusion: In this community sample of Chinese older adults, a decline in cognitive screening tests in short term (two years) offered useful information in predicting dementia conversion over a longer period.}, + langid = {english}, + file = {/home/src/Offline/Papers/wong et al_2013_cognitive predictors for five-year conversion to dementia in community-dwelling.pdf} +} + +@article{woodmanBriefIntroductionUse2010, + title = {A Brief Introduction to the Use of Event-Related Potentials in Studies of Perception and Attention}, + author = {Woodman, Geoffrey F.}, + date = {2010-11}, + journaltitle = {Attention, Perception, \& Psychophysics}, + shortjournal = {Attention, Perception, \& Psychophysics}, + volume = {72}, + number = {8}, + pages = {2031--2046}, + issn = {1943-3921, 1943-393X}, + doi = {10.3758/BF03196680}, + abstract = {Due to the precise temporal resolution of electrophysiological recordings, the event-related potential (ERP) technique has proven particularly valuable for testing theories of perception and attention. Here, I provide a brief tutorial of the ERP technique for consumers of such research and those considering the use of human electrophysiology in their own work. My discussion begins with the basics regarding what brain activity ERPs measure and why they are well suited to reveal critical aspects of perceptual processing, attentional selection, and cognition that are unobservable with behavioral methods alone. I then review a number of important methodological issues and often forgotten facts that should be considered when evaluating or planning ERP experiments.}, + langid = {english}, + file = {/home/src/Papers/woodman_2010_a brief introduction to the use of event-related potentials in studies of.pdf} +} + +@article{wordenAnticipatoryBiasingVisuospatial2000, + title = {Anticipatory {{Biasing}} of {{Visuospatial Attention Indexed}} by {{Retinotopically Specific}} α-{{Bank Electroencephalography Increases}} over {{Occipital Cortex}}}, + author = {Worden, Michael S. and Foxe, John J. and Wang, Norman and Simpson, Gregory V.}, + date = {2000-03-15}, + journaltitle = {The Journal of Neuroscience}, + shortjournal = {J. Neurosci.}, + volume = {20}, + number = {6}, + pages = {RC63-RC63}, + issn = {0270-6474, 1529-2401}, + doi = {10.1523/JNEUROSCI.20-06-j0002.2000}, + langid = {english}, + file = {/home/src/Papers/worden et al_2000_anticipatory biasing of visuospatial attention indexed by retinotopically.pdf} +} + +@book{WorldFactbook20042004, + title = {The {{World Factbook}} 2004}, + date = {2004}, + publisher = {{Central Intelligence Agency}}, + location = {{Washington DC}}, + keywords = {\#nosource} +} + +@online{WorldFactbookCentral, + title = {The {{World Factbook}} — {{Central Intelligence Agency}}}, + url = {https://www.cia.gov/library/publications/the-world-factbook/geos/us.html}, + urldate = {2018-05-26}, + keywords = {database,georgia,maternal-mortality,us}, + file = {/home/cedarprince/Zotero/storage/LTVHJXXB/us.html} +} + +@report{worldhealthorganizationCOVID19StrategyUpdate2020, + title = {{{COVID-19 Strategy Update}}}, + shorttitle = {{{COVID-19 Strategy Update}}}, + author = {{World Health Organization}}, + date = {2020-04-14}, + institution = {{World Health Organization}}, + url = {https://www.who.int/docs/default-source/coronaviruse/covid-strategy-update-14april2020.pdf?sfvrsn=29da3ba0_19&download=true}, + urldate = {2020-11-09}, + file = {/home/cedarprince/Zotero/storage/68JHBZ4E/covid-strategy-update-14april2020.pdf} +} + +@online{WorldPopulationAre, + title = {1\% of the World's Population Are Now Refugees.}, + url = {https://www.weforum.org/agenda/2018/06/refugees-now-make-up-1-of-the-worlds-population/}, + urldate = {2018-07-14}, + abstract = {Global peace has declined for the fourth year in a row contributing to an increase in displaced and stateless people.}, + organization = {{World Economic Forum}}, + keywords = {middle-east,refugees,syria,world,world-economic-forum}, + file = {/home/cedarprince/Zotero/storage/5FUE8CKJ/refugees-now-make-up-1-of-the-worlds-population.html} +} + +@online{WristSizing, + title = {Wrist {{Sizing}}}, + url = {http://www.onceuponaname.com/sizing.html}, + urldate = {2020-02-11}, + file = {/home/cedarprince/Zotero/storage/HBTD4USK/sizing.html} +} + +@article{xiaBiologicalActivitiesChitosan2011, + title = {Biological Activities of Chitosan and Chitooligosaccharides}, + author = {Xia, Wenshui and Liu, Ping and Zhang, Jiali and Chen, Jie}, + year = {2011/1/1/2011///}, + journaltitle = {Food Hydrocolloids}, + shortjournal = {Food Hydrocolloids}, + volume = {25}, + pages = {170--179}, + issn = {0268-005X}, + url = {http://ezproxy.corning-cc.edu:2048/login?url=http://search.ebscohost.com/login.aspx?direct=true&db=edselp&AN=S0268005X10000469&site=eds-live&scope=site}, + abstract = {Chitosan and its oligosaccharides, which are known to possess multiple functional properties, have attracted considerable interest due to their biological activities and potential applications in the food, pharmaceutical, agricultural and environmental industries. Many researchers have focused on chitosan as a potential source of bioactive materials in the past few decades. This review focuses on the biological activities of chitosan and chitooligosaccharides based on our and others’ latest research results, including hypocholesterolemic, antimicrobial, immunostimulating, antitumor and anticancer effects, accelerating calcium and iron absorption, anti-inflammatory, antioxidant and Angiotensin-I-converting enzyme (ACE) inhibitory activities and so on, which are all correlated with their structures and physicochemical properties. The bioactivities summarized here may provide novel insights into the functions of chitosan, its derivatives or oligosaccharides and potentially enable their use as functional-food components and additives.}, + keywords = {\#nosource} +} + +@article{xuAntiBiofoulingStrategiesLongTerm2020, + title = {Anti-{{Biofouling Strategies}} for {{Long-Term Continuous Use}} of {{Implantable Biosensors}}}, + author = {Xu, Jian and Lee, Hyowon}, + date = {2020-08-07}, + journaltitle = {Chemosensors}, + shortjournal = {Chemosensors}, + volume = {8}, + number = {3}, + pages = {66}, + issn = {2227-9040}, + doi = {10.3390/chemosensors8030066}, + abstract = {The growing trend for personalized medicine calls for more reliable implantable biosensors that are capable of continuously monitoring target analytes for extended periods (i.e., {$>$}30 d). While promising biosensors for various applications are constantly being developed in the laboratories across the world, many struggle to maintain reliable functionality in complex in vivo environments over time. In this review, we explore the impact of various biotic and abiotic failure modes on the reliability of implantable biosensors. We discuss various design considerations for the development of chronically reliable implantable biosensors with a specific focus on strategies to combat biofouling, which is a fundamental challenge for many implantable devices. Briefly, we introduce the process of the foreign body response and compare the in vitro and the in vivo performances of state-of-the-art implantable biosensors. We then discuss the latest development in material science to minimize and delay biofouling including the usage of various hydrophilic, biomimetic, drug-eluting, zwitterionic, and other smart polymer materials. We also explore a number of active anti-biofouling approaches including stimuli-responsive materials and mechanical actuation. Finally, we conclude this topical review with a discussion on future research opportunities towards more reliable implantable biosensors.}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/ATG4Q7XJ/Xu and Lee - 2020 - Anti-Biofouling Strategies for Long-Term Continuou.pdf} +} + +@article{yahyaInactivationColiphageMS21992, + title = {Inactivation of Coliphage {{MS-2}} and Poliovirus by Copper, Silver, and Chlorine}, + author = {Yahya, Moyasar T. and Straub, Timothy M. and Gerba, Charles P.}, + date = {1992-05-01}, + journaltitle = {Canadian Journal of Microbiology}, + shortjournal = {Can. J. Microbiol.}, + volume = {38}, + number = {5}, + pages = {430--435}, + issn = {0008-4166}, + doi = {10.1139/m92-072}, + keywords = {\#nosource} +} + +@article{yancy2020covid, + title = {{{COVID-19}} and African Americans}, + author = {Yancy, Clyde W}, + date = {2020}, + journaltitle = {Jama} +} + +@article{ye2020cytokine, + title = {Cytokine Storm in {{COVID-19}} and Treatment}, + author = {Ye, Qing and Wang, Bili and Mao, Jianhua}, + date = {2020}, + journaltitle = {Journal of Infection}, + shortjournal = {J. Infect.}, + publisher = {{Elsevier}} +} + +@article{yore2007reliability, + title = {Reliability and Validity of the Instrument Used in {{BRFSS}} to Assess Physical Activity.}, + author = {Yore, Michelle M and Ham, Sandra A and Ainsworth, Barbara E and Kruger, Judy and Reis, Jared P and Kohl 3rd, Harold W and Macera, Caroline A}, + date = {2007}, + journaltitle = {Medicine and science in sports and exercise}, + shortjournal = {Med. Sci. Sports Exerc.}, + volume = {39}, + number = {8}, + pages = {1267--1274} +} + +@online{yostlabs3SpaceDataLoggerN.D., + title = {3-{{Space}}™ {{Data Logger}} - {{Yost Labs}}}, + author = {{Yost Labs}}, + year = {N.D.}, + url = {https://yostlabs.com/product/3-space-data-logger/}, + urldate = {2020-01-14}, + organization = {{Yost Labs}}, + file = {/home/cedarprince/Zotero/storage/CQAZPDJP/3-space-data-logger.html} +} + +@article{YoungPeopleMental2021, + title = {Young People’s Mental Health Is Finally Getting the Attention It Needs}, + date = {2021-10-07}, + journaltitle = {Nature}, + volume = {598}, + number = {7880}, + pages = {235--236}, + publisher = {{Nature Publishing Group}}, + doi = {10.1038/d41586-021-02690-5}, + abstract = {The COVID-19 pandemic, a UNICEF report and a review of the latest research all highlight the urgent need for better prevention and treatment of youth anxiety and depression.}, + issue = {7880}, + langid = {english}, + keywords = {Policy,Psychiatric disorders,Public health}, + annotation = {Bandiera\_abtest: a Cg\_type: Editorial Subject\_term: Psychiatric disorders, Public health, Policy}, + file = {/Users/jzelko3/Knowledgebase/Papers/2021_Young people’s mental health is finally getting the attention it needs.pdf;/home/cedarprince/Zotero/storage/5D6MHA62/d41586-021-02690-5.html} +} + +@audio{youngSparkNoraYoung, + title = {Spark with {{Nora Young}}}, + author = {Young, Nora}, + series = {Exercise {{App Shows Why Anonymous Data Can Still Be Dangerous}}}, + url = {http://www.cbc.ca/radio/spark/383-dangerous-data-libraries-and-more-1.4516637/exercise-app-shows-why-anonymous-data-can-still-be-dangerous-1.4516651}, + urldate = {2018-02-04}, + keywords = {\#nosource} +} + +@book{youngUltralearning2019, + title = {Ultralearning}, + author = {Young, Scott}, + date = {2019}, + publisher = {{HarperCollins Publishers}}, + file = {/home/src/Papers/scott young_2019_ultralearning.pdf} +} + +@inproceedings{zaffaroniSleepMinderInnovativeContactfree2009, + title = {{{SleepMinder}}: {{An}} Innovative Contact-Free Device for the Estimation of the Apnoea-Hypopnoea Index}, + shorttitle = {{{SleepMinder}}}, + booktitle = {2009 {{Annual International Conference}} of the {{IEEE Engineering}} in {{Medicine}} and {{Biology Society}}}, + author = {Zaffaroni, A. and de Chazal, P. and Heneghan, C. and Boyle, P. and Mppm, P.R. and McNicholas, W.T.}, + options = {useprefix=true}, + date = {2009-09}, + pages = {7091--9094}, + publisher = {{IEEE}}, + location = {{Minneapolis, MN}}, + doi = {10.1109/IEMBS.2009.5332909}, + abstract = {We describe an innovative sensor technology (SleepMinder™) for contact-less and convenient measurement of sleep and breathing in the home. The system is based on a novel non-contact biomotion sensor and proprietary automated analysis software. The biomotion sensor uses an ultra low-power radio-frequency transceiver to sense the movement and respiration of a subject. Proprietary software performs a variety of signal analysis tasks including respiration analysis, sleep quality measurement and sleep apnea assessment.}, + eventtitle = {2009 {{Annual International Conference}} of the {{IEEE Engineering}} in {{Medicine}} and {{Biology Society}}}, + langid = {english}, + keywords = {apnoea,sleep}, + file = {/home/src/Papers/Zaffaroni et al_2009_SleepMinder.pdf} +} + +@article{zecavati2009neurometabolic, + title = {Neurometabolic Disorders and Dysfunction in Autism Spectrum Disorders}, + author = {Zecavati, Nassim and Spence, Sarah J}, + date = {2009}, + journaltitle = {Current neurology and neuroscience reports}, + shortjournal = {Curr. Neurol. Neurosci. Rep.}, + volume = {9}, + number = {2}, + pages = {129--136}, + publisher = {{Springer}} +} + +@inproceedings{zelkoDevelopingRobustComputable2023, + title = {Developing a {{Robust Computable Phenotype Definition Workflow}} to {{Describe Health}} and {{Disease}} in {{Observational Health Research}}}, + author = {Zelko, Jacob S and Lee, Dong Yun and Rao, Gowtham and Gasman, Sarah and Altosaar, Jaan and Freeman, Shenita R and Shoaibi, Azza}, + date = {2023}, + abstract = {Health informatics can inform decisions that practitioners, patients, policymakers, and researchers need to make about health and disease. Health informatics is built upon patient health data leading to the need to codify patient health information. Such standardization is required to compute population statistics (such as prevalence, incidence, etc.) that are common metrics used in fields such as epidemiology. Reliable decisionmaking about health and disease rests on our ability to organize, analyze, and assess data repositories that contain patient health data.}, + eventtitle = {{{IEEE Computer Based Medical Systems}}}, + langid = {english}, + file = {/home/cedarprince/Zotero/storage/ECQPDPMH/Zelko et al. - Developing a Robust Computable Phenotype Definitio.pdf} +} + +@online{zelkoImplementingMarchingSquares2020, + title = {Implementing {{Marching Squares}}}, + author = {Zelko, Jacob}, + date = {2020-12-01}, + url = {http://jacobzelko.com/marching-squares/}, + organization = {{The Cedar Ledge}} +} + +@unpublished{zelkoPilotCharacterizationStudy2022, + title = {A {{Pilot Characterization Study Assessing Health Equity}} in {{Mental Healthcare Delivery}} within the {{State}} of {{Georgia}}}, + author = {Zelko, Jacob}, + date = {2022-10-15}, + editora = {Hy, Malina and Duke, Jon D and Chinta, Varshini and Liau, Emily and Knowlton, Morgan}, + editoratype = {collaborator}, + eventtitle = {2022 {{OHDSI Symposium}}}, + venue = {{Bethesda, Maryland}} +} + +@online{ZETOInc, + title = {{{ZETO Inc}}}, + url = {https://zeto-inc.com/}, + urldate = {2019-12-10}, + abstract = {The FIRST true dry electrode EEG system cleared for clinical use by FDA}, + langid = {american}, + organization = {{ZETO INC}}, + file = {/home/cedarprince/Zotero/storage/4N9HGXDS/zeto-inc.com.html} +} + +@article{zhang1999vivo, + title = {In Vivo Friction Properties of Human Skin}, + author = {Zhang, M and Mak, AFT}, + date = {1999}, + journaltitle = {Prosthetics and orthotics International}, + shortjournal = {Prosthet. Orthot. Int.}, + volume = {23}, + number = {2}, + pages = {135--141}, + publisher = {{SAGE Publications Sage UK: London, England}} +} + +@inproceedings{zhaoThroughWallHumanPose2018, + title = {Through-{{Wall Human Pose Estimation Using Radio Signals}}}, + booktitle = {2018 {{IEEE}}/{{CVF Conference}} on {{Computer Vision}} and {{Pattern Recognition}}}, + author = {Zhao, Mingmin and Li, Tianhong and Alsheikh, Mohammad Abu and Tian, Yonglong and Zhao, Hang and Torralba, Antonio and Katabi, Dina}, + date = {2018-06}, + pages = {7356--7365}, + publisher = {{IEEE}}, + location = {{Salt Lake City, UT}}, + doi = {10.1109/CVPR.2018.00768}, + abstract = {This paper demonstrates accurate human pose estimation through walls and occlusions. We leverage the fact that wireless signals in the WiFi frequencies traverse walls and reflect off the human body. We introduce a deep neural network approach that parses such radio signals to estimate 2D poses. Since humans cannot annotate radio signals, we use state-of-the-art vision model to provide cross-modal supervision. Specifically, during training the system uses synchronized wireless and visual inputs, extracts pose information from the visual stream, and uses it to guide the training process. Once trained, the network uses only the wireless signal for pose estimation. We show that, when tested on visible scenes, the radio-based system is almost as accurate as the vision-based system used to train it. Yet, unlike vision-based pose estimation, the radio-based system can estimate 2D poses through walls despite never trained on such scenarios. Demo videos are available at our website.}, + eventtitle = {2018 {{IEEE}}/{{CVF Conference}} on {{Computer Vision}} and {{Pattern Recognition}} ({{CVPR}})}, + isbn = {978-1-5386-6420-9}, + langid = {english}, + keywords = {pose}, + file = {/home/src/Offline/Papers/zhao et al_2018_through-wall human pose estimation using radio signals.pdf} +} + +@article{zheng2020covid, + title = {{{COVID-19}} and the Cardiovascular System}, + author = {Zheng, Ying-Ying and Ma, Yi-Tong and Zhang, Jin-Ying and Xie, Xiang}, + date = {2020}, + journaltitle = {Nature Reviews Cardiology}, + shortjournal = {Nat. Rev. Cardiol.}, + volume = {17}, + number = {5}, + pages = {259--260}, + publisher = {{Nature Publishing Group}} +} + +@article{zinzow2012connecting, + title = {Connecting Active Duty and Returning Veterans to Mental Health Treatment: {{Interventions}} and Treatment Adaptations That May Reduce Barriers to Care}, + author = {Zinzow, Heidi M and Britt, Thomas W and McFadden, Anna C and Burnette, Crystal M and Gillispie, Skye}, + date = {2012}, + journaltitle = {Clinical psychology review}, + shortjournal = {Clin. Psychol. Rev.}, + volume = {32}, + number = {8}, + pages = {741--753}, + publisher = {{Elsevier}} +} + +@article{zlotnick1999clinical, + title = {Clinical Correlates of Self-Mutilation in a Sample of General Psychiatric Patients}, + author = {Zlotnick, Caron and Mattia, Jill I and Zimmerman, Mark}, + date = {1999}, + journaltitle = {The Journal of nervous and mental disease}, + shortjournal = {J. Nerv. Ment. Dis.}, + volume = {187}, + number = {5}, + pages = {296--301}, + publisher = {{LWW}} +} + +@online{zotero-1378, + title = {About}, + url = {https://www.memrise.com/about/}, + urldate = {2020-06-07}, + langid = {english}, + organization = {{Memrise}}, + file = {/home/cedarprince/Zotero/storage/J9TWYPH3/about.html} +} diff --git a/test/runtests.jl b/test/runtests.jl index 8511567..dbd7496 100644 --- a/test/runtests.jl +++ b/test/runtests.jl @@ -1,3 +1,93 @@ +using Markdown +import Markdown: + Header, + parse, + plain +using NoteMate using Test -@test 2 + 2 == 4 +@testset "Markdown parser test suite" begin + + csl_path = "./assets/ieee.csl" + bibtex_path = "./assets/zettel.bib" + test_note = read("./assets/test_note.md", String) + parsed_note = Markdown.parse(test_note) + + # Testset for finding bibliography reference and generating citations + @testset "find_citation_groups" begin + expected = ["[@gorgolewskiBrainImagingData2016]"] + @test unique(find_citation_groups(test_note)) == expected + end + + # Testset for generating inline markdown references + @testset "create_inline_citations" begin + expected = Dict("[@gorgolewskiBrainImagingData2016]" => "[1]") + citation_keys = find_citation_groups(test_note) + inline_citations_dict = create_inline_citations(citation_keys, bibtex_path, csl_path) + @test inline_citations_dict == expected + end + + #= + + # Testset to find links in markdown files + # BUG: Use the "how I anki note" to see that not all the links are pulled properly. + @testset "find_markdown_links" begin + expected = ["[link](https://example.com)", "[relative link](othernote.md)"] + text = "Here is a [link](https://example.com). Here is another [relative link](othernote.md)" + @test find_markdown_links(text) == expected + end + + # Test suite for `create_relative_links` + @testset "create_relative_links" begin + link_strings = ["[link](https://example.com)", "[relative link](othernote.md)"] + prefix = "https://jacobzelko.com/" + expected = Dict( + "[link](https://example.com)" => "[link](https://example.com/)", + "[relative link](othernote.md)" => "[relative link](othernote)" + ) + @test create_relative_links(link_strings; prefix = prefix) == expected + end + + =# + + #= + # Test suite for pulling apart sections of a note + @testset "get_headers" begin + file_headers = get_headers(parsed_file.content) + + header_1 = filter(x -> typeof(x) <: Header{1}, file_headers) + header_2 = filter(x -> typeof(x) <: Header{2}, file_headers) + + expected = Vector[ + Header{1}(Any["Brain Imaging Data Structure (BIDS)"]), + Header{2}(Any["Bibliography"]), + Header{2}(Any["Note Linked From:"]), + Header{2}(Any["Notes"]), + Header{3}(Any["Purpose"]), + Header{3}(Any["Specific data specifications:"]), + Header{3}(Any["Topics"]), + Header{2}(Any["References"]) + ] + expected = convert(Vector{Any}, expected) + + @test sum.([typeof.(file_headers) .== typeof.(expected)])[1] == 8 + + sections = get_sections(parsed_file.content, section_headers; name_sections=true) + + # TODO: Pick up from here + expected_title_section = Dict{String, Vector{Any}}("Title" => [Header{1}(Any["Brain Imaging Data Structure (BIDS)"]), Markdown.Paragraph(Any[Markdown.Bold(Any["Date:"]), " November 5 2020 "]), Markdown.Paragraph(Any[Markdown.Bold(Any["Summary:"]), " An overview of the BIDS style for Brain Imaging Data. "]), Markdown.Paragraph(Any[Markdown.Bold(Any["Keywords:"]), " ##zettel #bids #neuroscience #brain #imaging #archive"])]) + + title_header = filter(x -> typeof(x) <: Header{1}, file_headers) + title_section = get_title_section(parsed_file.content, title_header; name_sections=true) + + @test title_section == expected_title_section + + + section_headers = filter(x -> typeof(x) <: Header{2}, file_headers) + + + end + + =# + +end