DESCRIPTION

Package: microxanox
Version: 0.9.3
Date: 2023-11-13
Title: Oxic-Anoxic Regime Shifts in Microbial Communities
Description: Model to simulate a three functional group system with four chemical substrates
  using a set of ordinary differential equations. 
  Simulations can be run individually or over a parameter range, to find stable states. The 
  model features multiple species per functional group, where the number is only limited by 
  computational constraints. The R package is constructed in such a way, that the results 
  contain the input parameter used, so that a saved results can be loaded again and thesimulation be repeated.
Authors@R: 
    c(person(given = "Owen L.",
             family = "Petchey",
             role = c("aut", "cre"),
             email = "Owen.Petchey@ieu.uzh.ch",
             comment = c(ORCID = "0000-0002-7724-1633")),
      person(given = "Rainer M.",
             family = "Krug",
             role = "ctb",
             email = "Rainer.Krug@uzh.ch",
             comment = c(ORCID = "0000-0002-7490-0066")),
      person(given = "Pascal",
             family = "Baertschi",
             role = "ctb",
             email = "compbio.baertschi@gmail.com",
             comment = c(ORCID = "0000-0002-6533-0399"))
      )
Maintainer: Owen L. Petchey <Owen.Petchey@ieu.uzh.ch>
URL: https://github.com/UZH-PEG/microxanox/
BugReports: https://github.com/UZH-PEG/microxanox/issues 
License: MIT + file LICENSE
Depends: 
  R (>= 4.1.0),
Imports: 
  magrittr,
  tibble,
  ggplot2,
  patchwork,
  grDevices,
  stats,
  mgcv,
  deSolve,
  dplyr,
  tidyr,
  stringr,
  multidplyr,
  ggpubr,
  DescTools
Suggests: 
    knitr,
    rmarkdown,
    rootSolve,
    tidyverse,
    testthat (>= 3.0.0),
    roxyglobals
RoxygenNote: 7.3.1
Encoding: UTF-8
VignetteBuilder: knitr
Config/testthat/edition: 3
Roxygen: list(roclets = c("collate", "namespace", "rd",
    "roxyglobals::global_roclet"))
Config/roxyglobals/filename: globals.R
Config/roxyglobals/unique: FALSE