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Create data fails #1

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miseiler opened this issue Feb 25, 2023 · 1 comment
Open

Create data fails #1

miseiler opened this issue Feb 25, 2023 · 1 comment

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@miseiler
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When attempting to create_data.py, progress gets to 2% and I get a failure:
Worker 1 of 1 starting ##------------------------------------------------------------------------------ (2%)Traceback (most recent call last): File "create_data.py", line 130, in <module> raise e File "create_data.py", line 127, in <module> process_gene(gene, out_x, out_y) File "create_data.py", line 87, in process_gene assert len(x) == len(y) AssertionError

@YStrauch
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YStrauch commented Apr 2, 2023

First of all, apologies for the late reply, I don't have the time to actively maintain this project.

Second, I was able to setup and create the data project following the readme. I can only guess what might be going wrong on your end.

Try deleting everything in data/raw, which is third party data that will be re-downloaded. Maybe you have cancelled the download prematurely?

Or, it might be a dependency issue which is really hard to debug unfortunately. I documented which versions I use and it's really hard to help you. I hope it was a cancelled download.

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