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128 diagnosis labels #105

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yya518 opened this issue Dec 3, 2020 · 2 comments
Open

128 diagnosis labels #105

yya518 opened this issue Dec 3, 2020 · 2 comments

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@yya518
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yya518 commented Dec 3, 2020

I noticed that there are pre-defined 128 diagnosis labels, while the entire MIMIC data has ~6,xxx diagnosis. What is the rational for restricting to 128 pre-defined labels only, and why 128? I guess those are the most common diagnosis labels? I couldn't find this detail in the paper so am curious about this choice. Thank you!

mimic3-benchmarks/mimic3benchmark/preprocessing.py

Line 62 in eccc86d

diagnosis_labels = ['4019', '4280', '41401', '42731', '25000', '5849', '2724', '51881', '53081', '5990', '2720',

@joaofonseca9
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Have you by any chance found out why this happens?

@partizanos
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Did any of you check if the rest are super rare cases or if they are defined in HCUP file?

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@yya518 @partizanos @joaofonseca9