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setup.py
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setup.py
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import os
import platform
import subprocess
import time
import numpy as np
from setuptools import find_packages, setup
MAJOR = 0
MINOR = 1
PATCH = 0
SUFFIX = ''
SHORT_VERSION = '{}.{}.{}{}'.format(MAJOR, MINOR, PATCH, SUFFIX)
version_file = 'version.py'
def readme():
with open('README.md') as f:
content = f.read()
return content
def get_git_hash():
def _minimal_ext_cmd(cmd):
# construct minimal environment
env = {}
for k in ['SYSTEMROOT', 'PATH', 'HOME']:
v = os.environ.get(k)
if v is not None:
env[k] = v
# LANGUAGE is used on win32
env['LANGUAGE'] = 'C'
env['LANG'] = 'C'
env['LC_ALL'] = 'C'
out = subprocess.Popen(
cmd, stdout=subprocess.PIPE, env=env).communicate()[0]
return out
try:
out = _minimal_ext_cmd(['git', 'rev-parse', 'HEAD'])
sha = out.strip().decode('ascii')
except OSError:
sha = 'unknown'
return sha
def get_hash():
if os.path.exists('.git'):
sha = get_git_hash()[:7]
elif os.path.exists(version_file):
try:
from alphapose.version import __version__
sha = __version__.split('+')[-1]
except ImportError:
raise ImportError('Unable to get git version')
else:
sha = 'unknown'
return sha
def write_version_py():
content = """# GENERATED VERSION FILE
# TIME: {}
__version__ = '{}'
short_version = '{}'
"""
sha = get_hash()
VERSION = SHORT_VERSION + '+' + sha
with open(version_file, 'w') as f:
f.write(content.format(time.asctime(), VERSION, SHORT_VERSION))
def get_version():
with open(version_file, 'r') as f:
exec(compile(f.read(), version_file, 'exec'))
return locals()['__version__']
if __name__ == '__main__':
write_version_py()
setup(
name='alphatracker',
version=get_version(),
description='Code for AlphaTracker',
long_description=readme(),
keywords='multi-animal tracking, pose estimation, unsupervised behavioral clustering',
url='https://github.com/MVIG-SJTU/AlphaTracker',
packages=find_packages(exclude=('data', 'exp',)),
package_data={'': ['*.json', '*.txt']},
classifiers=[
'Development Status :: 4 - Beta',
'License :: OSI Approved :: Apache Software License',
'Operating System :: OS Independent',
'Programming Language :: Python :: 3',
'Programming Language :: Python :: 3.6',
'Programming Language :: Python :: 3.7',
'Programming Language :: Python :: 3.8',
'Programming Language :: Python :: 3.9',
'Programming Language :: Python :: 3.10',
],
license='GPLv3',
python_requires=">=3",
setup_requires=['pytest-runner', 'numpy'],
tests_require=['pytest'],
install_requires=[
'numpy', 'scipy', 'opencv-python', 'matplotlib',
'tqdm', 'googledrivedownloader', 'h5py', 'pandas',
'nibabel', 'pycocotools', 'tensorboardx', 'munkres',
'visdom', 'scikit-learn', 'seaborn', 'umap'
],
zip_safe=False)
print('\n Install `torchsample` ...')
cmd = 'python -m pip install git+https://github.com/ZexinChen/torchsample'
os.system(cmd)