From 1f8245e2d27ef06f0a838674df7ffdec291510ab Mon Sep 17 00:00:00 2001 From: Luc Blassel Date: Tue, 23 Feb 2021 12:10:23 +0100 Subject: [PATCH] adding report dir creation to tandemmapper.py --- tandemmapper.py | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/tandemmapper.py b/tandemmapper.py index 6990c12..d8ce7f1 100755 --- a/tandemmapper.py +++ b/tandemmapper.py @@ -47,6 +47,9 @@ def main(assembly_fnames, nano_reads_fname, pacbio_reads_fname, hifi_reads_fname out_dir = abspath(out_dir) if not isdir(out_dir): os.makedirs(out_dir) + report_dir = join(out_dir, "report") + if not isdir(report_dir): + os.makedirs(report_dir) tmp_dir = join(out_dir, "tmp") if not isdir(tmp_dir): os.makedirs(tmp_dir) @@ -77,4 +80,4 @@ def main(assembly_fnames, nano_reads_fname, pacbio_reads_fname, hifi_reads_fname if __name__ == '__main__': - main() \ No newline at end of file + main()