Number of TF in my dataset

[PernilleYR]

Hi,

Thank you for your amazing work!

When running rungenie3 I got this message:
"Only 39% of the 1839 TFs in the database were found in the dataset. Do they use the same gene IDs?
"

I'm working with 10X data, I used GRCh38.92 as reference without any filtering on any genes.

Do you think the results can then be biased? Do you have any idea how I could increase the overlap between your database and my dataset?
Which annotation do you use or how could I have access to the list of TF?

Thank you in advance,

Pernille