CoexMethod. how to choose after running NULL

[iichelhadi]

Hello
I ran SCENIC pipeline in R with coexmethod set to NULL to determine how many TF modules I can detect at different stringencies. I was wondering if there is a way to select the stringency I want after running this step.
scenicOptions <- runSCENIC_2_createRegulons(scenicOptions, coexMethod = NULL)

[1] "################# runSCENIC_2_createRegulons ####################"
18:33 Step 2. Identifying regulons
Using the column 'features' as feature index for the ranking database.
Using the column 'features' as feature index for the ranking database.
Using the column 'features' as feature index for the ranking database.
tfModulesSummary:
[,1]
top1sdAndtop10perTarget 1
top5perTargetAndtop3sd 2
top50Andtop10perTarget 11
top3sdAndtop10perTarget 15
top50Andtop3sd 77
top5perTarget 157
top3sd 208
top10perTarget 278
top50Andtop1sd 398
top50 690
top1sd 699
top50perTarget 1219
w0.005Andw0.001 1227
18:33 RcisTarget: Calculating AUC
Using the column 'features' as feature index for the ranking database.
Scoring database: [Source file: hg19-500bp-upstream-10species.mc9nr.feather]

Regards