Skip to content

Commit

Permalink
AMS initial
Browse files Browse the repository at this point in the history
initial commit
  • Loading branch information
ammsimmons committed Jul 3, 2024
1 parent 0d3c466 commit 03657e1
Show file tree
Hide file tree
Showing 23 changed files with 3,181 additions and 404 deletions.
1 change: 1 addition & 0 deletions .Rprofile
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
source("renv/activate.R")
13 changes: 8 additions & 5 deletions .Rproj.user/shared/notebooks/paths
Original file line number Diff line number Diff line change
@@ -1,5 +1,8 @@
C:/GitHub/learn-glms/_book/sitemap.xml="0FBBDE0E"
C:/GitHub/learn-glms/index.qmd="753F8BEB"
C:/GitHub/learn-glms/intro.qmd="DA6B28D4"
C:/GitHub/learn-glms/references.qmd="AE8DEE9D"
C:/GitHub/learn-glms/summary.qmd="C170EC79"
/Users/a061s835/Documents/GitHub/learn-glms/_quarto.yml="9F3754ED"
/Users/a061s835/Documents/GitHub/learn-glms/ch1-linear-models.qmd="E695F427"
/Users/a061s835/Documents/GitHub/learn-glms/index.qmd="E8768981"
/Users/a061s835/Documents/GitHub/learn-glms/intro.qmd="CE3EA25D"
/Users/a061s835/Documents/GitHub/learn-glms/linear-models.qmd="D5CE2F55"
/Users/a061s835/Documents/GitHub/learn-glms/references.bib="E4ED08DE"
/Users/a061s835/Documents/GitHub/learn-glms/renv.lock="4BB41821"
/Users/a061s835/Documents/GitHub/learn-glms/summary.qmd="AEF2D307"
1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
@@ -1,3 +1,4 @@
/.quarto/
/_freeze/
/_book/
.Rproj.user
5 changes: 2 additions & 3 deletions .quarto/_freeze/index/execute-results/html.json
Original file line number Diff line number Diff line change
@@ -1,8 +1,7 @@
{
"hash": "f89d2cae73031aafc1d0dc4ae48f295e",
"hash": "dfbab78830a2d271657029bd0eb2c9c3",
"result": {
"engine": "knitr",
"markdown": "# Preface {.unnumbered}\n\nThis is a Quarto book.\n\nTo learn more about Quarto books visit <https://quarto.org/docs/books>.\n\n\n::: {.cell}\n\n```{.r .cell-code}\n1 + 1\n```\n\n::: {.cell-output .cell-output-stdout}\n\n```\n[1] 2\n```\n\n\n:::\n:::\n",
"markdown": "# Preface {.unnumbered}\n\nThis is a Quarto book.\n\nTo learn more about Quarto books visit <https://quarto.org/docs/books>.\n\n\n::: {.cell}\n\n```{.r .cell-code}\n1 + 1\n```\n\n::: {.cell-output .cell-output-stdout}\n```\n[1] 2\n```\n:::\n:::\n\n\nThis goal of this <i> R bookdown </i> is to create a set of open-source online modules to broaden the range of statistical models taught in graduate psychology programs beyond the standard models of ANOVA and multiple regression. These modules will act as a foundation for students to harness the flexibility of Generalized Linear Models (GLMs) across many common situations in applied research. We contend that the inherent issue that plagues adoption of GLMs in psychology stems from traditional teaching of GLMs which has not stressed how the importance of the shape and nature of the outcome distributions affects the choice of link functions.\n\n\n\n",
"supporting": [],
"filters": [
"rmarkdown/pagebreak.lua"
Expand Down
3 changes: 1 addition & 2 deletions .quarto/_freeze/intro/execute-results/html.json
Original file line number Diff line number Diff line change
@@ -1,8 +1,7 @@
{
"hash": "e514ad799b2b10ced9d02b36ca26bbd2",
"result": {
"engine": "knitr",
"markdown": "# Introduction\n\nThis is a book created from markdown and executable code.\n\nSee @knuth84 for additional discussion of literate programming.\n\n\n::: {.cell}\n\n```{.r .cell-code}\n1 + 1\n```\n\n::: {.cell-output .cell-output-stdout}\n\n```\n[1] 2\n```\n\n\n:::\n:::\n",
"markdown": "# Introduction\n\nThis is a book created from markdown and executable code.\n\nSee @knuth84 for additional discussion of literate programming.\n\n\n::: {.cell}\n\n```{.r .cell-code}\n1 + 1\n```\n\n::: {.cell-output .cell-output-stdout}\n```\n[1] 2\n```\n:::\n:::\n",
"supporting": [],
"filters": [
"rmarkdown/pagebreak.lua"
Expand Down
3 changes: 1 addition & 2 deletions .quarto/_freeze/summary/execute-results/html.json
Original file line number Diff line number Diff line change
@@ -1,8 +1,7 @@
{
"hash": "6b21a250588dde6f79d83bc9a62d55df",
"result": {
"engine": "knitr",
"markdown": "# Summary\n\nIn summary, this book has no content whatsoever.\n\n\n::: {.cell}\n\n```{.r .cell-code}\n1 + 1\n```\n\n::: {.cell-output .cell-output-stdout}\n\n```\n[1] 2\n```\n\n\n:::\n:::\n",
"markdown": "# Summary\n\nIn summary, this book has no content whatsoever.\n\n\n::: {.cell}\n\n```{.r .cell-code}\n1 + 1\n```\n\n::: {.cell-output .cell-output-stdout}\n```\n[1] 2\n```\n:::\n:::\n",
"supporting": [],
"filters": [
"rmarkdown/pagebreak.lua"
Expand Down
2 changes: 1 addition & 1 deletion .quarto/cites/index.json
Original file line number Diff line number Diff line change
@@ -1 +1 @@
{"summary.qmd":[],"index.qmd":[],"intro.qmd":["knuth84"],"references.qmd":[]}
{"summary.qmd":[],"intro.qmd":["knuth84"],"index.qmd":[],"references.qmd":[],"linear-models.qmd":[]}
2 changes: 1 addition & 1 deletion .quarto/idx/index.qmd.json
Original file line number Diff line number Diff line change
@@ -1 +1 @@
{"title":"Preface","markdown":{"headingText":"Preface","headingAttr":{"id":"","classes":["unnumbered"],"keyvalue":[]},"containsRefs":false,"markdown":"\nThis is a Quarto book.\n\nTo learn more about Quarto books visit <https://quarto.org/docs/books>.\n\n```{r}\n1 + 1\n```\n","srcMarkdownNoYaml":""},"formats":{"html":{"identifier":{"display-name":"HTML","target-format":"html","base-format":"html"},"execute":{"fig-width":7,"fig-height":5,"fig-format":"retina","fig-dpi":96,"df-print":"default","error":false,"eval":true,"cache":null,"freeze":"auto","echo":true,"output":true,"warning":true,"include":true,"keep-md":false,"keep-ipynb":false,"ipynb":null,"enabled":null,"daemon":null,"daemon-restart":false,"debug":false,"ipynb-filters":[],"ipynb-shell-interactivity":null,"plotly-connected":true,"engine":"knitr"},"render":{"keep-tex":false,"keep-typ":false,"keep-source":false,"keep-hidden":false,"prefer-html":false,"output-divs":true,"output-ext":"html","fig-align":"default","fig-pos":null,"fig-env":null,"code-fold":"none","code-overflow":"scroll","code-link":true,"code-line-numbers":false,"code-tools":false,"tbl-colwidths":"auto","merge-includes":true,"inline-includes":false,"preserve-yaml":false,"latex-auto-mk":true,"latex-auto-install":true,"latex-clean":true,"latex-min-runs":1,"latex-max-runs":10,"latex-makeindex":"makeindex","latex-makeindex-opts":[],"latex-tlmgr-opts":[],"latex-input-paths":[],"latex-output-dir":null,"link-external-icon":false,"link-external-newwindow":false,"self-contained-math":false,"format-resources":[],"notebook-links":true},"pandoc":{"standalone":true,"wrap":"none","default-image-extension":"png","to":"html","output-file":"index.html"},"language":{"toc-title-document":"Table of contents","toc-title-website":"On this page","related-formats-title":"Other Formats","related-notebooks-title":"Notebooks","source-notebooks-prefix":"Source","other-links-title":"Other Links","code-links-title":"Code Links","launch-dev-container-title":"Launch Dev Container","launch-binder-title":"Launch Binder","article-notebook-label":"Article Notebook","notebook-preview-download":"Download Notebook","notebook-preview-download-src":"Download Source","notebook-preview-back":"Back to Article","manuscript-meca-bundle":"MECA Bundle","section-title-abstract":"Abstract","section-title-appendices":"Appendices","section-title-footnotes":"Footnotes","section-title-references":"References","section-title-reuse":"Reuse","section-title-copyright":"Copyright","section-title-citation":"Citation","appendix-attribution-cite-as":"For attribution, please cite this work as:","appendix-attribution-bibtex":"BibTeX citation:","title-block-author-single":"Author","title-block-author-plural":"Authors","title-block-affiliation-single":"Affiliation","title-block-affiliation-plural":"Affiliations","title-block-published":"Published","title-block-modified":"Modified","title-block-keywords":"Keywords","callout-tip-title":"Tip","callout-note-title":"Note","callout-warning-title":"Warning","callout-important-title":"Important","callout-caution-title":"Caution","code-summary":"Code","code-tools-menu-caption":"Code","code-tools-show-all-code":"Show All Code","code-tools-hide-all-code":"Hide All Code","code-tools-view-source":"View Source","code-tools-source-code":"Source Code","tools-share":"Share","tools-download":"Download","code-line":"Line","code-lines":"Lines","copy-button-tooltip":"Copy to Clipboard","copy-button-tooltip-success":"Copied!","repo-action-links-edit":"Edit this page","repo-action-links-source":"View source","repo-action-links-issue":"Report an issue","back-to-top":"Back to top","search-no-results-text":"No results","search-matching-documents-text":"matching documents","search-copy-link-title":"Copy link to search","search-hide-matches-text":"Hide additional matches","search-more-match-text":"more match in this document","search-more-matches-text":"more matches in this document","search-clear-button-title":"Clear","search-text-placeholder":"","search-detached-cancel-button-title":"Cancel","search-submit-button-title":"Submit","search-label":"Search","toggle-section":"Toggle section","toggle-sidebar":"Toggle sidebar navigation","toggle-dark-mode":"Toggle dark mode","toggle-reader-mode":"Toggle reader mode","toggle-navigation":"Toggle navigation","crossref-fig-title":"Figure","crossref-tbl-title":"Table","crossref-lst-title":"Listing","crossref-thm-title":"Theorem","crossref-lem-title":"Lemma","crossref-cor-title":"Corollary","crossref-prp-title":"Proposition","crossref-cnj-title":"Conjecture","crossref-def-title":"Definition","crossref-exm-title":"Example","crossref-exr-title":"Exercise","crossref-ch-prefix":"Chapter","crossref-apx-prefix":"Appendix","crossref-sec-prefix":"Section","crossref-eq-prefix":"Equation","crossref-lof-title":"List of Figures","crossref-lot-title":"List of Tables","crossref-lol-title":"List of Listings","environment-proof-title":"Proof","environment-remark-title":"Remark","environment-solution-title":"Solution","listing-page-order-by":"Order By","listing-page-order-by-default":"Default","listing-page-order-by-date-asc":"Oldest","listing-page-order-by-date-desc":"Newest","listing-page-order-by-number-desc":"High to Low","listing-page-order-by-number-asc":"Low to High","listing-page-field-date":"Date","listing-page-field-title":"Title","listing-page-field-description":"Description","listing-page-field-author":"Author","listing-page-field-filename":"File Name","listing-page-field-filemodified":"Modified","listing-page-field-subtitle":"Subtitle","listing-page-field-readingtime":"Reading Time","listing-page-field-wordcount":"Word Count","listing-page-field-categories":"Categories","listing-page-minutes-compact":"{0} min","listing-page-category-all":"All","listing-page-no-matches":"No matching items","listing-page-words":"{0} words"},"metadata":{"lang":"en","fig-responsive":true,"quarto-version":"1.4.557","bibliography":["references.bib"],"theme":"cosmo","author-meta":"Aaron Matthew Simmons and Jeffrey M. Girard"},"extensions":{"book":{"multiFile":true}}}},"projectFormats":["html"]}
{"title":"Preface","markdown":{"headingText":"Preface","headingAttr":{"id":"","classes":["unnumbered"],"keyvalue":[]},"containsRefs":false,"markdown":"\nThis is a Quarto book.\n\nTo learn more about Quarto books visit <https://quarto.org/docs/books>.\n\n```{r}\n1 + 1\n```\n\nThis goal of this <i> R bookdown </i> is to create a set of open-source online modules to broaden the range of statistical models taught in graduate psychology programs beyond the standard models of ANOVA and multiple regression. These modules will act as a foundation for students to harness the flexibility of Generalized Linear Models (GLMs) across many common situations in applied research. We contend that the inherent issue that plagues adoption of GLMs in psychology stems from traditional teaching of GLMs which has not stressed how the importance of the shape and nature of the outcome distributions affects the choice of link functions.\n\n\n\n","srcMarkdownNoYaml":""},"formats":{"html":{"identifier":{"display-name":"HTML","target-format":"html","base-format":"html"},"execute":{"fig-width":7,"fig-height":5,"fig-format":"retina","fig-dpi":96,"df-print":"default","error":false,"eval":true,"cache":null,"freeze":"auto","echo":true,"output":true,"warning":true,"include":true,"keep-md":false,"keep-ipynb":false,"ipynb":null,"enabled":null,"daemon":null,"daemon-restart":false,"debug":false,"ipynb-filters":[],"engine":"knitr"},"render":{"keep-tex":false,"keep-source":false,"keep-hidden":false,"prefer-html":false,"output-divs":true,"output-ext":"html","fig-align":"default","fig-pos":null,"fig-env":null,"code-fold":"none","code-overflow":"scroll","code-link":true,"code-line-numbers":false,"code-tools":false,"tbl-colwidths":"auto","merge-includes":true,"inline-includes":false,"preserve-yaml":false,"latex-auto-mk":true,"latex-auto-install":true,"latex-clean":true,"latex-max-runs":10,"latex-makeindex":"makeindex","latex-makeindex-opts":[],"latex-tlmgr-opts":[],"latex-input-paths":[],"latex-output-dir":null,"link-external-icon":false,"link-external-newwindow":false,"self-contained-math":false,"format-resources":[],"notebook-links":true,"format-links":true},"pandoc":{"standalone":true,"wrap":"none","default-image-extension":"png","to":"html","output-file":"index.html"},"language":{"toc-title-document":"Table of contents","toc-title-website":"On this page","related-formats-title":"Other Formats","related-notebooks-title":"Notebooks","source-notebooks-prefix":"Source","section-title-abstract":"Abstract","section-title-appendices":"Appendices","section-title-footnotes":"Footnotes","section-title-references":"References","section-title-reuse":"Reuse","section-title-copyright":"Copyright","section-title-citation":"Citation","appendix-attribution-cite-as":"For attribution, please cite this work as:","appendix-attribution-bibtex":"BibTeX citation:","title-block-author-single":"Author","title-block-author-plural":"Authors","title-block-affiliation-single":"Affiliation","title-block-affiliation-plural":"Affiliations","title-block-published":"Published","title-block-modified":"Modified","callout-tip-title":"Tip","callout-note-title":"Note","callout-warning-title":"Warning","callout-important-title":"Important","callout-caution-title":"Caution","code-summary":"Code","code-tools-menu-caption":"Code","code-tools-show-all-code":"Show All Code","code-tools-hide-all-code":"Hide All Code","code-tools-view-source":"View Source","code-tools-source-code":"Source Code","code-line":"Line","code-lines":"Lines","copy-button-tooltip":"Copy to Clipboard","copy-button-tooltip-success":"Copied!","repo-action-links-edit":"Edit this page","repo-action-links-source":"View source","repo-action-links-issue":"Report an issue","back-to-top":"Back to top","search-no-results-text":"No results","search-matching-documents-text":"matching documents","search-copy-link-title":"Copy link to search","search-hide-matches-text":"Hide additional matches","search-more-match-text":"more match in this document","search-more-matches-text":"more matches in this document","search-clear-button-title":"Clear","search-detached-cancel-button-title":"Cancel","search-submit-button-title":"Submit","search-label":"Search","toggle-section":"Toggle section","toggle-sidebar":"Toggle sidebar navigation","toggle-dark-mode":"Toggle dark mode","toggle-reader-mode":"Toggle reader mode","toggle-navigation":"Toggle navigation","crossref-fig-title":"Figure","crossref-tbl-title":"Table","crossref-lst-title":"Listing","crossref-thm-title":"Theorem","crossref-lem-title":"Lemma","crossref-cor-title":"Corollary","crossref-prp-title":"Proposition","crossref-cnj-title":"Conjecture","crossref-def-title":"Definition","crossref-exm-title":"Example","crossref-exr-title":"Exercise","crossref-ch-prefix":"Chapter","crossref-apx-prefix":"Appendix","crossref-sec-prefix":"Section","crossref-eq-prefix":"Equation","crossref-lof-title":"List of Figures","crossref-lot-title":"List of Tables","crossref-lol-title":"List of Listings","environment-proof-title":"Proof","environment-remark-title":"Remark","environment-solution-title":"Solution","listing-page-order-by":"Order By","listing-page-order-by-default":"Default","listing-page-order-by-date-asc":"Oldest","listing-page-order-by-date-desc":"Newest","listing-page-order-by-number-desc":"High to Low","listing-page-order-by-number-asc":"Low to High","listing-page-field-date":"Date","listing-page-field-title":"Title","listing-page-field-description":"Description","listing-page-field-author":"Author","listing-page-field-filename":"File Name","listing-page-field-filemodified":"Modified","listing-page-field-subtitle":"Subtitle","listing-page-field-readingtime":"Reading Time","listing-page-field-categories":"Categories","listing-page-minutes-compact":"{0} min","listing-page-category-all":"All","listing-page-no-matches":"No matching items"},"metadata":{"lang":"en","fig-responsive":true,"quarto-version":"1.3.450","bibliography":["references.bib"],"theme":"cosmo","author-meta":"Aaron Matthew Simmons and Jeffrey M. Girard"},"extensions":{"book":{"multiFile":true}}}},"projectFormats":["html"]}
Loading

0 comments on commit 03657e1

Please sign in to comment.