can't install hic-straw on win11 python3.9 #129
Comments
|
Have you tried doing as suggested and running
pip install --use-pep517
On Sat, Sep 16, 2023 at 3:57 PM fage66639 ***@***.***> wrote:
(autohic) C:\Users\Administrator>pip install hic-straw -i
https://pypi.tuna.tsinghua.edu.cn/simple
Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
Collecting hic-straw
Using cached
https://pypi.tuna.tsinghua.edu.cn/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz
(18 kB)
Preparing metadata (setup.py) ... done
Collecting pybind11>=2.4 (from hic-straw)
Using cached
https://pypi.tuna.tsinghua.edu.cn/packages/06/55/9f73c32dda93fa4f539fafa268f9504e83c489f460c380371d94296126cd/pybind11-2.11.1-py3-none-any.whl
(227 kB)
Building wheels for collected packages: hic-straw
Building wheel for hic-straw (setup.py) ... error
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [22 lines of output]
I:\conda\envs\autohic\lib\site-packages\setuptools_*init*_.py:84:
_DeprecatedInstaller: setuptools.installer and fetch_build_eggs are
deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
running bdist_wheel
running build
running build_ext
building 'hicstraw' extension
creating build
creating build\temp.win-amd64-cpython-39
creating build\temp.win-amd64-cpython-39\Release
creating build\temp.win-amd64-cpython-39\Release\src
"C:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c /nologo /O2 /W3 /GL /DNDEBUG /MD -Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include -Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include -II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files (x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp /Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc /DVERSION_INFO=\\\"1.3.1\\\"
straw.cpp
src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such file or directory
error: command 'C:\\Program Files\\Microsoft Visual Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe' failed with exit code 2
[end of output]
note: This error originates from a subprocess, and is likely not a problem
with pip.
ERROR: Failed building wheel for hic-straw
Running setup.py clean for hic-straw
Failed to build hic-straw
ERROR: Could not build wheels for hic-straw, which is required to install
pyproject.toml-based projects
—
Reply to this email directly, view it on GitHub
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Neva Cherniavsky Durand, Ph.D. | she, her, hers
Senior Scientist | Gene Regulation Observatory
Broad Institute of MIT and Harvard
|
|
(autohic) C:\Users\Administrator>pip install --verbose hic-straw==1.3.1 --use-pep517 × Building wheel for hic-straw (pyproject.toml) did not run successfully. note: This error originates from a subprocess, and is likely not a problem with pip. |
|
Please take a moment to review as I am still encountering errors.
Thank you.
FA ZHANG
| |
fazhang
|
|
***@***.***
|
---- Replied Message ----
| From | ***@***.***> |
| Date | 9/16/2023 22:54 |
| To | ***@***.***> |
| Cc | ***@***.***> ,
***@***.***> |
| Subject | Re: [aidenlab/straw] can't install hic-straw on win11 python3.9 (Issue #129) |
Have you tried doing as suggested and running
pip install --use-pep517
On Sat, Sep 16, 2023 at 3:57 PM fage66639 ***@***.***> wrote:
(autohic) C:\Users\Administrator>pip install hic-straw -i
https://pypi.tuna.tsinghua.edu.cn/simple
Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
Collecting hic-straw
Using cached
https://pypi.tuna.tsinghua.edu.cn/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz
(18 kB)
Preparing metadata (setup.py) ... done
Collecting pybind11>=2.4 (from hic-straw)
Using cached
https://pypi.tuna.tsinghua.edu.cn/packages/06/55/9f73c32dda93fa4f539fafa268f9504e83c489f460c380371d94296126cd/pybind11-2.11.1-py3-none-any.whl
(227 kB)
Building wheels for collected packages: hic-straw
Building wheel for hic-straw (setup.py) ... error
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [22 lines of output]
I:\conda\envs\autohic\lib\site-packages\setuptools_*init*_.py:84:
_DeprecatedInstaller: setuptools.installer and fetch_build_eggs are
deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
running bdist_wheel
running build
running build_ext
building 'hicstraw' extension
creating build
creating build\temp.win-amd64-cpython-39
creating build\temp.win-amd64-cpython-39\Release
creating build\temp.win-amd64-cpython-39\Release\src
"C:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c /nologo /O2 /W3 /GL /DNDEBUG /MD -Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include -Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include -II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files (x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp /Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc /DVERSION_INFO=\\\"1.3.1\\\"
straw.cpp
src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such file or directory
error: command 'C:\\Program Files\\Microsoft Visual Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe' failed with exit code 2
[end of output]
note: This error originates from a subprocess, and is likely not a problem
with pip.
ERROR: Failed building wheel for hic-straw
Running setup.py clean for hic-straw
Failed to build hic-straw
ERROR: Could not build wheels for hic-straw, which is required to install
pyproject.toml-based projects
—
Reply to this email directly, view it on GitHub
<#129>, or unsubscribe
<https://github.com/notifications/unsubscribe-auth/AAK2EW4BTRNVWBNGZTDKPCTX2WV5FANCNFSM6AAAAAA425CHQA>
.
You are receiving this because you are subscribed to this thread.Message
ID: ***@***.***>
--
Neva Cherniavsky Durand, Ph.D. | she, her, hers
Senior Scientist | Gene Regulation Observatory
Broad Institute of MIT and Harvard
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you authored the thread.Message ID: ***@***.***>
(autohic) C:\Users\Administrator>pip install --verbose hic-straw==1.3.1 --use-pep517
Using pip 23.2.1 from I:\conda\envs\autohic\lib\site-packages\pip (python 3.9)
Looking in indexes: https://pypi.douban.com/simple/
Collecting hic-straw==1.3.1
Using cached https://pypi.doubanio.com/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz (18 kB)
Running command pip subprocess to install build dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting setuptools>=40.8.0
Using cached https://pypi.doubanio.com/packages/c7/42/be1c7bbdd83e1bfb160c94b9cafd8e25efc7400346cf7ccdbdb452c467fa/setuptools-68.0.0-py3-none-any.whl (804 kB)
Collecting wheel
Using cached https://pypi.doubanio.com/packages/61/86/cc8d1ff2ca31a312a25a708c891cf9facbad4eae493b3872638db6785eb5/wheel-0.40.0-py3-none-any.whl (64 kB)
Installing collected packages: wheel, setuptools
Successfully installed setuptools-68.0.0 wheel-0.40.0
Installing build dependencies ... done
Running command Getting requirements to build wheel
Getting requirements to build wheel ... done
Running command pip subprocess to install backend dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting pybind11>=2.4
Using cached https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl (222 kB)
Installing collected packages: pybind11
Successfully installed pybind11-2.10.4
Installing backend dependencies ... done
Running command Preparing metadata (pyproject.toml)
running dist_info
creating C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info
writing C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\PKG-INFO
writing dependency_links to C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\dependency_links.txt
writing requirements to C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\requires.txt
writing top-level names to C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\top_level.txt
writing manifest file 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
reading manifest file 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
creating 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw-1.3.1.dist-info'
Preparing metadata (pyproject.toml) ... done
Collecting pybind11>=2.4 (from hic-straw==1.3.1)
Using cached https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl (222 kB)
Building wheels for collected packages: hic-straw
Running command Building wheel for hic-straw (pyproject.toml)
running bdist_wheel
running build
running build_ext
building 'hicstraw' extension
creating build
creating build\temp.win-amd64-cpython-39
creating build\temp.win-amd64-cpython-39\Release
creating build\temp.win-amd64-cpython-39\Release\src
"C:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c /nologo /O2 /W3 /GL /DNDEBUG /MD -IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-_i4yf4ay\normal\Lib\site-packages\pybind11\include -IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-_i4yf4ay\normal\Lib\site-packages\pybind11\include -II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files (x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp /Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc /DVERSION_INFO=\\\"1.3.1\\\"
straw.cpp
src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such file or directory
error: command 'C:\\Program Files\\Microsoft Visual Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe' failed with exit code 2
error: subprocess-exited-with-error
× Building wheel for hic-straw (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
full command: 'I:\conda\envs\autohic\python.exe' 'I:\conda\envs\autohic\lib\site-packages\pip\_vendor\pyproject_hooks\_in_process\_in_process.py' build_wheel 'C:\Users\Administrator\AppData\Local\Temp\tmpo81ymztw'
cwd: C:\Users\Administrator\AppData\Local\Temp\pip-install-791d60lq\hic-straw_dc45237ec34143368fcacff6feb26bb9
Building wheel for hic-straw (pyproject.toml) ... error
ERROR: Failed building wheel for hic-straw
Failed to build hic-straw
ERROR: Could not build wheels for hic-straw, which is required to install pyproject.toml-based projects
|
|
You need to install curl
On Sat, Sep 16, 2023 at 5:17 PM fage66639 ***@***.***> wrote:
Please take a moment to review as I am still encountering errors.
Thank you.
FA ZHANG
| |
fazhang
|
|
***@***.***
|
---- Replied Message ----
| From | ***@***.***> |
| Date | 9/16/2023 22:54 |
| To | ***@***.***> |
| Cc | ***@***.***> ,
***@***.***> |
| Subject | Re: [aidenlab/straw] can't install hic-straw on win11
python3.9 (Issue #129) |
Have you tried doing as suggested and running
pip install --use-pep517
On Sat, Sep 16, 2023 at 3:57 PM fage66639 ***@***.***> wrote:
> (autohic) C:\Users\Administrator>pip install hic-straw -i
> https://pypi.tuna.tsinghua.edu.cn/simple
> Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
> Collecting hic-straw
> Using cached
>
https://pypi.tuna.tsinghua.edu.cn/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz
> (18 kB)
> Preparing metadata (setup.py) ... done
> Collecting pybind11>=2.4 (from hic-straw)
> Using cached
>
https://pypi.tuna.tsinghua.edu.cn/packages/06/55/9f73c32dda93fa4f539fafa268f9504e83c489f460c380371d94296126cd/pybind11-2.11.1-py3-none-any.whl
> (227 kB)
> Building wheels for collected packages: hic-straw
> Building wheel for hic-straw (setup.py) ... error
> error: subprocess-exited-with-error
>
> × python setup.py bdist_wheel did not run successfully.
> │ exit code: 1
> ╰─> [22 lines of output]
> I:\conda\envs\autohic\lib\site-packages\setuptools_*init*_.py:84:
> _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are
> deprecated.
> !!
>
>
********************************************************************************
> Requirements should be satisfied by a PEP 517 installer.
> If you are using pip, you can try `pip install --use-pep517`.
>
********************************************************************************
>
> !!
> dist.fetch_build_eggs(dist.setup_requires)
> running bdist_wheel
> running build
> running build_ext
> building 'hicstraw' extension
> creating build
> creating build\temp.win-amd64-cpython-39
> creating build\temp.win-amd64-cpython-39\Release
> creating build\temp.win-amd64-cpython-39\Release\src
> "C:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c
/nologo /O2 /W3 /GL /DNDEBUG /MD
-Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include
-Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include
-II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program
Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include"
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files
(x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files
(x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp
/Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc
/DVERSION_INFO=\\\"1.3.1\\\"
> straw.cpp
> src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such
file or directory
> error: command 'C:\\Program Files\\Microsoft Visual
Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe'
failed with exit code 2
> [end of output]
>
> note: This error originates from a subprocess, and is likely not a
problem
> with pip.
> ERROR: Failed building wheel for hic-straw
> Running setup.py clean for hic-straw
> Failed to build hic-straw
> ERROR: Could not build wheels for hic-straw, which is required to install
> pyproject.toml-based projects
>
> —
> Reply to this email directly, view it on GitHub
> <#129>, or unsubscribe
> <
https://github.com/notifications/unsubscribe-auth/AAK2EW4BTRNVWBNGZTDKPCTX2WV5FANCNFSM6AAAAAA425CHQA
>
> .
> You are receiving this because you are subscribed to this thread.Message
> ID: ***@***.***>
>
--
Neva Cherniavsky Durand, Ph.D. | she, her, hers
Senior Scientist | Gene Regulation Observatory
Broad Institute of MIT and Harvard
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you authored the thread.Message ID:
***@***.***>
(autohic) C:\Users\Administrator>pip install --verbose hic-straw==1.3.1
--use-pep517
Using pip 23.2.1 from I:\conda\envs\autohic\lib\site-packages\pip (python
3.9)
Looking in indexes: https://pypi.douban.com/simple/
Collecting hic-straw==1.3.1
Using cached
https://pypi.doubanio.com/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz
(18 kB)
Running command pip subprocess to install build dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting setuptools>=40.8.0
Using cached
https://pypi.doubanio.com/packages/c7/42/be1c7bbdd83e1bfb160c94b9cafd8e25efc7400346cf7ccdbdb452c467fa/setuptools-68.0.0-py3-none-any.whl
(804 kB)
Collecting wheel
Using cached
https://pypi.doubanio.com/packages/61/86/cc8d1ff2ca31a312a25a708c891cf9facbad4eae493b3872638db6785eb5/wheel-0.40.0-py3-none-any.whl
(64 kB)
Installing collected packages: wheel, setuptools
Successfully installed setuptools-68.0.0 wheel-0.40.0
Installing build dependencies ... done
Running command Getting requirements to build wheel
Getting requirements to build wheel ... done
Running command pip subprocess to install backend dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting pybind11>=2.4
Using cached
https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl
(222 kB)
Installing collected packages: pybind11
Successfully installed pybind11-2.10.4
Installing backend dependencies ... done
Running command Preparing metadata (pyproject.toml)
running dist_info
creating
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info
writing
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\PKG-INFO
writing dependency_links to
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\dependency_links.txt
writing requirements to
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\requires.txt
writing top-level names to
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\top_level.txt
writing manifest file
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
reading manifest file
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
creating
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw-1.3.1.dist-info'
Preparing metadata (pyproject.toml) ... done
Collecting pybind11>=2.4 (from hic-straw==1.3.1)
Using cached
https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl
(222 kB)
Building wheels for collected packages: hic-straw
Running command Building wheel for hic-straw (pyproject.toml)
running bdist_wheel
running build
running build_ext
building 'hicstraw' extension
creating build
creating build\temp.win-amd64-cpython-39
creating build\temp.win-amd64-cpython-39\Release
creating build\temp.win-amd64-cpython-39\Release\src
"C:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c
/nologo /O2 /W3 /GL /DNDEBUG /MD
-IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-_i4yf4ay\normal\Lib\site-packages\pybind11\include
-IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-_i4yf4ay\normal\Lib\site-packages\pybind11\include
-II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program
Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include"
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files
(x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files
(x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp
/Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc
/DVERSION_INFO=\\\"1.3.1\\\"
straw.cpp
src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such
file or directory
error: command 'C:\\Program Files\\Microsoft Visual
Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe'
failed with exit code 2
error: subprocess-exited-with-error
× Building wheel for hic-straw (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem
with pip.
full command: 'I:\conda\envs\autohic\python.exe'
'I:\conda\envs\autohic\lib\site-packages\pip\_vendor\pyproject_hooks\_in_process\_in_process.py'
build_wheel 'C:\Users\Administrator\AppData\Local\Temp\tmpo81ymztw'
cwd:
C:\Users\Administrator\AppData\Local\Temp\pip-install-791d60lq\hic-straw_dc45237ec34143368fcacff6feb26bb9
Building wheel for hic-straw (pyproject.toml) ... error
ERROR: Failed building wheel for hic-straw
Failed to build hic-straw
ERROR: Could not build wheels for hic-straw, which is required to install
pyproject.toml-based projects
—
Reply to this email directly, view it on GitHub
<#129 (comment)>,
or unsubscribe
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You are receiving this because you commented.Message ID:
***@***.***>
--
Neva Cherniavsky Durand, Ph.D. | she, her, hers
Senior Scientist | Gene Regulation Observatory
Broad Institute of MIT and Harvard
|
|
I have downloaded curl, but I am still experiencing issues.
Thank you.
FA ZHANG
| |
fazhang
|
|
***@***.***
|
---- Replied Message ----
| From | ***@***.***> |
| Date | 9/16/2023 23:23 |
| To | ***@***.***> |
| Cc | ***@***.***> ,
***@***.***> |
| Subject | Re: [aidenlab/straw] can't install hic-straw on win11 python3.9 (Issue #129) |
You need to install curl
On Sat, Sep 16, 2023 at 5:17 PM fage66639 ***@***.***> wrote:
Please take a moment to review as I am still encountering errors.
Thank you.
FA ZHANG
| |
fazhang
|
|
***@***.***
|
---- Replied Message ----
| From | ***@***.***> |
| Date | 9/16/2023 22:54 |
| To | ***@***.***> |
| Cc | ***@***.***> ,
***@***.***> |
| Subject | Re: [aidenlab/straw] can't install hic-straw on win11
python3.9 (Issue #129) |
Have you tried doing as suggested and running
pip install --use-pep517
On Sat, Sep 16, 2023 at 3:57 PM fage66639 ***@***.***> wrote:
> (autohic) C:\Users\Administrator>pip install hic-straw -i
> https://pypi.tuna.tsinghua.edu.cn/simple
> Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
> Collecting hic-straw
> Using cached
>
https://pypi.tuna.tsinghua.edu.cn/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz
> (18 kB)
> Preparing metadata (setup.py) ... done
> Collecting pybind11>=2.4 (from hic-straw)
> Using cached
>
https://pypi.tuna.tsinghua.edu.cn/packages/06/55/9f73c32dda93fa4f539fafa268f9504e83c489f460c380371d94296126cd/pybind11-2.11.1-py3-none-any.whl
> (227 kB)
> Building wheels for collected packages: hic-straw
> Building wheel for hic-straw (setup.py) ... error
> error: subprocess-exited-with-error
>
> × python setup.py bdist_wheel did not run successfully.
> │ exit code: 1
> ╰─> [22 lines of output]
> I:\conda\envs\autohic\lib\site-packages\setuptools_*init*_.py:84:
> _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are
> deprecated.
> !!
>
>
********************************************************************************
> Requirements should be satisfied by a PEP 517 installer.
> If you are using pip, you can try `pip install --use-pep517`.
>
********************************************************************************
>
> !!
> dist.fetch_build_eggs(dist.setup_requires)
> running bdist_wheel
> running build
> running build_ext
> building 'hicstraw' extension
> creating build
> creating build\temp.win-amd64-cpython-39
> creating build\temp.win-amd64-cpython-39\Release
> creating build\temp.win-amd64-cpython-39\Release\src
> "C:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c
/nologo /O2 /W3 /GL /DNDEBUG /MD
-Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include
-Ic:\users\administrator\appdata\local\temp\pip-install-0esd_50t\hic-straw_25cecc52233e4ddb94bfc9a631c3b6c7\.eggs\pybind11-2.10.4-py3.9.egg\pybind11\include
-II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program
Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include"
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files
(x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files
(x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp
/Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc
/DVERSION_INFO=\\\"1.3.1\\\"
> straw.cpp
> src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such
file or directory
> error: command 'C:\\Program Files\\Microsoft Visual
Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe'
failed with exit code 2
> [end of output]
>
> note: This error originates from a subprocess, and is likely not a
problem
> with pip.
> ERROR: Failed building wheel for hic-straw
> Running setup.py clean for hic-straw
> Failed to build hic-straw
> ERROR: Could not build wheels for hic-straw, which is required to install
> pyproject.toml-based projects
>
> —
> Reply to this email directly, view it on GitHub
> <#129>, or unsubscribe
> <
https://github.com/notifications/unsubscribe-auth/AAK2EW4BTRNVWBNGZTDKPCTX2WV5FANCNFSM6AAAAAA425CHQA
>
> .
> You are receiving this because you are subscribed to this thread.Message
> ID: ***@***.***>
>
--
Neva Cherniavsky Durand, Ph.D. | she, her, hers
Senior Scientist | Gene Regulation Observatory
Broad Institute of MIT and Harvard
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you authored the thread.Message ID:
***@***.***>
(autohic) C:\Users\Administrator>pip install --verbose hic-straw==1.3.1
--use-pep517
Using pip 23.2.1 from I:\conda\envs\autohic\lib\site-packages\pip (python
3.9)
Looking in indexes: https://pypi.douban.com/simple/
Collecting hic-straw==1.3.1
Using cached
https://pypi.doubanio.com/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz
(18 kB)
Running command pip subprocess to install build dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting setuptools>=40.8.0
Using cached
https://pypi.doubanio.com/packages/c7/42/be1c7bbdd83e1bfb160c94b9cafd8e25efc7400346cf7ccdbdb452c467fa/setuptools-68.0.0-py3-none-any.whl
(804 kB)
Collecting wheel
Using cached
https://pypi.doubanio.com/packages/61/86/cc8d1ff2ca31a312a25a708c891cf9facbad4eae493b3872638db6785eb5/wheel-0.40.0-py3-none-any.whl
(64 kB)
Installing collected packages: wheel, setuptools
Successfully installed setuptools-68.0.0 wheel-0.40.0
Installing build dependencies ... done
Running command Getting requirements to build wheel
Getting requirements to build wheel ... done
Running command pip subprocess to install backend dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting pybind11>=2.4
Using cached
https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl
(222 kB)
Installing collected packages: pybind11
Successfully installed pybind11-2.10.4
Installing backend dependencies ... done
Running command Preparing metadata (pyproject.toml)
running dist_info
creating
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info
writing
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\PKG-INFO
writing dependency_links to
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\dependency_links.txt
writing requirements to
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\requires.txt
writing top-level names to
C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\top_level.txt
writing manifest file
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
reading manifest file
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw.egg-info\SOURCES.txt'
creating
'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-uw96mjct\hic_straw-1.3.1.dist-info'
Preparing metadata (pyproject.toml) ... done
Collecting pybind11>=2.4 (from hic-straw==1.3.1)
Using cached
https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl
(222 kB)
Building wheels for collected packages: hic-straw
Running command Building wheel for hic-straw (pyproject.toml)
running bdist_wheel
running build
running build_ext
building 'hicstraw' extension
creating build
creating build\temp.win-amd64-cpython-39
creating build\temp.win-amd64-cpython-39\Release
creating build\temp.win-amd64-cpython-39\Release\src
"C:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c
/nologo /O2 /W3 /GL /DNDEBUG /MD
-IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-_i4yf4ay\normal\Lib\site-packages\pybind11\include
-IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-_i4yf4ay\normal\Lib\site-packages\pybind11\include
-II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program
Files\Microsoft Visual
Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include"
"-IC:\Program Files\Microsoft Visual
Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files
(x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files
(x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files
(x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp
/Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc
/DVERSION_INFO=\\\"1.3.1\\\"
straw.cpp
src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such
file or directory
error: command 'C:\\Program Files\\Microsoft Visual
Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe'
failed with exit code 2
error: subprocess-exited-with-error
× Building wheel for hic-straw (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem
with pip.
full command: 'I:\conda\envs\autohic\python.exe'
'I:\conda\envs\autohic\lib\site-packages\pip\_vendor\pyproject_hooks\_in_process\_in_process.py'
build_wheel 'C:\Users\Administrator\AppData\Local\Temp\tmpo81ymztw'
cwd:
C:\Users\Administrator\AppData\Local\Temp\pip-install-791d60lq\hic-straw_dc45237ec34143368fcacff6feb26bb9
Building wheel for hic-straw (pyproject.toml) ... error
ERROR: Failed building wheel for hic-straw
Failed to build hic-straw
ERROR: Could not build wheels for hic-straw, which is required to install
pyproject.toml-based projects
—
Reply to this email directly, view it on GitHub
<#129 (comment)>,
or unsubscribe
<https://github.com/notifications/unsubscribe-auth/AAK2EW6VGMJAZI2YHKMYMVTX2W7JJANCNFSM6AAAAAA425CHQA>
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You are receiving this because you commented.Message ID:
***@***.***>
--
Neva Cherniavsky Durand, Ph.D. | she, her, hers
Senior Scientist | Gene Regulation Observatory
Broad Institute of MIT and Harvard
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you authored the thread.Message ID: ***@***.***>
(autohic) C:\Users\Administrator>curl --version
curl 8.3.0 (x86_64-pc-win32) libcurl/8.3.0 Schannel zlib/1.2.13 libssh2/1.11.0
Release-Date: 2023-09-13
Protocols: dict file ftp ftps gopher gophers http https imap imaps ldap ldaps mqtt pop3 pop3s rtsp scp sftp smb smbs smtp smtps telnet tftp
Features: alt-svc AsynchDNS HSTS HTTPS-proxy IPv6 Kerberos Largefile libz NTLM SPNEGO SSL SSPI threadsafe Unicode UnixSockets
(autohic) C:\Users\Administrator>pip install --verbose hic-straw==1.3.1 --use-pep517
Using pip 23.2.1 from I:\conda\envs\autohic\lib\site-packages\pip (python 3.9)
Looking in indexes: https://pypi.douban.com/simple/
Collecting hic-straw==1.3.1
Downloading https://pypi.doubanio.com/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz (18 kB)
Running command pip subprocess to install build dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting setuptools>=40.8.0
Using cached https://pypi.doubanio.com/packages/c7/42/be1c7bbdd83e1bfb160c94b9cafd8e25efc7400346cf7ccdbdb452c467fa/setuptools-68.0.0-py3-none-any.whl (804 kB)
Collecting wheel
Using cached https://pypi.doubanio.com/packages/61/86/cc8d1ff2ca31a312a25a708c891cf9facbad4eae493b3872638db6785eb5/wheel-0.40.0-py3-none-any.whl (64 kB)
Installing collected packages: wheel, setuptools
Successfully installed setuptools-68.0.0 wheel-0.40.0
Installing build dependencies ... done
Running command Getting requirements to build wheel
Getting requirements to build wheel ... done
Running command pip subprocess to install backend dependencies
Looking in indexes: https://pypi.douban.com/simple/
Collecting pybind11>=2.4
Using cached https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl (222 kB)
Installing collected packages: pybind11
Successfully installed pybind11-2.10.4
Installing backend dependencies ... done
Running command Preparing metadata (pyproject.toml)
running dist_info
creating C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info
writing C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info\PKG-INFO
writing dependency_links to C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info\dependency_links.txt
writing requirements to C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info\requires.txt
writing top-level names to C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info\top_level.txt
writing manifest file 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info\SOURCES.txt'
reading manifest file 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw.egg-info\SOURCES.txt'
creating 'C:\Users\Administrator\AppData\Local\Temp\pip-modern-metadata-raou5dem\hic_straw-1.3.1.dist-info'
Preparing metadata (pyproject.toml) ... done
Collecting pybind11>=2.4 (from hic-straw==1.3.1)
Using cached https://pypi.doubanio.com/packages/52/ed/68e989fdac8f352cb6d506fac111ba1e1b74c0ef3660fadeeeeb765bc03c/pybind11-2.10.4-py3-none-any.whl (222 kB)
Building wheels for collected packages: hic-straw
Running command Building wheel for hic-straw (pyproject.toml)
running bdist_wheel
running build
running build_ext
building 'hicstraw' extension
creating build
creating build\temp.win-amd64-cpython-39
creating build\temp.win-amd64-cpython-39\Release
creating build\temp.win-amd64-cpython-39\Release\src
"C:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\bin\HostX86\x64\cl.exe" /c /nologo /O2 /W3 /GL /DNDEBUG /MD -IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-i2pc4y4x\normal\Lib\site-packages\pybind11\include -IC:\Users\Administrator\AppData\Local\Temp\pip-build-env-i2pc4y4x\normal\Lib\site-packages\pybind11\include -II:\conda\envs\autohic\include -II:\conda\envs\autohic\Include "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.37.32822\ATLMFC\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files (x86)\Windows Kits\NETFXSDK\4.8\include\um" /EHsc /Tpsrc/straw.cpp /Fobuild\temp.win-amd64-cpython-39\Release\src/straw.obj /EHsc /DVERSION_INFO=\\\"1.3.1\\\"
straw.cpp
src/straw.cpp(34): fatal error C1083: 无法打开包括文件: “curl/curl.h”: No such file or directory
error: command 'C:\\Program Files\\Microsoft Visual Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.37.32822\\bin\\HostX86\\x64\\cl.exe' failed with exit code 2
error: subprocess-exited-with-error
× Building wheel for hic-straw (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
full command: 'I:\conda\envs\autohic\python.exe' 'I:\conda\envs\autohic\lib\site-packages\pip\_vendor\pyproject_hooks\_in_process\_in_process.py' build_wheel 'C:\Users\Administrator\AppData\Local\Temp\tmpdq53m6mc'
cwd: C:\Users\Administrator\AppData\Local\Temp\pip-install-e06tumpm\hic-straw_e82dc0544dc9415ab8d20f7d5df6bde2
Building wheel for hic-straw (pyproject.toml) ... error
ERROR: Failed building wheel for hic-straw
Failed to build hic-straw
ERROR: Could not build wheels for hic-straw, which is required to install pyproject.toml-based projects
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I am having the same problem on the bridges2 cluster on PSC |
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(autohic) C:\Users\Administrator>pip install hic-straw -i https://pypi.tuna.tsinghua.edu.cn/simple
Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
Collecting hic-straw
Using cached https://pypi.tuna.tsinghua.edu.cn/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz (18 kB)
Preparing metadata (setup.py) ... done
Collecting pybind11>=2.4 (from hic-straw)
Using cached https://pypi.tuna.tsinghua.edu.cn/packages/06/55/9f73c32dda93fa4f539fafa268f9504e83c489f460c380371d94296126cd/pybind11-2.11.1-py3-none-any.whl (227 kB)
Building wheels for collected packages: hic-straw
Building wheel for hic-straw (setup.py) ... error
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [22 lines of output]
I:\conda\envs\autohic\lib\site-packages\setuptools_init_.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for hic-straw
Running setup.py clean for hic-straw
Failed to build hic-straw
ERROR: Could not build wheels for hic-straw, which is required to install pyproject.toml-based projects
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