From 64aaced833c05720d06f4211457c5990a7d7ca2a Mon Sep 17 00:00:00 2001
From: Michael Riffle <mriffle@uw.edu>
Date: Thu, 15 Aug 2024 13:42:55 -0700
Subject: [PATCH] allow skyline report names with spaces

---
 modules/panorama.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/modules/panorama.nf b/modules/panorama.nf
index 2c422e0..f7d4ade 100644
--- a/modules/panorama.nf
+++ b/modules/panorama.nf
@@ -223,7 +223,7 @@ process UPLOAD_FILE {
         echo "Uploading ${file_to_upload} to Panorama..."
             ${exec_java_command(task.memory)} \
             -u \
-            -f "${file_to_upload}" \
+            -f "${file_name}" \
             -w "${web_dav_dir_url}" \
             -k \$PANORAMA_API_KEY \
             -c \