diff --git a/.github/workflows/integration-test.yml b/.github/workflows/integration-test.yml index 153854578d..6222f490a1 100644 --- a/.github/workflows/integration-test.yml +++ b/.github/workflows/integration-test.yml @@ -25,23 +25,19 @@ jobs: image: pecan/depends:R4.1 steps: - - name: work around https://github.com/actions/checkout/issues/766 - run: git config --global --add safe.directory "$GITHUB_WORKSPACE" + - uses: actions/checkout@v3 with: set-safe-directory: false - - name: update dependency lists - run: Rscript scripts/generate_dependencies.R - - - name: install newly-added dependencies - run: Rscript docker/depends/pecan.depends.R - name: Install Packages - run: make -j1 install + run: make - name: Run tests - run: Rscript modules/data.atmosphere/inst/integrationTests/test.download.AmerifluxLBL.R; - \ No newline at end of file + run: | + for FILE in modules/data.atmosphere/inst/integrationTests/*; do + Rscript $FILE; + done \ No newline at end of file