From ae6565a089627fa15be0b2ae6b02f240470abe3c Mon Sep 17 00:00:00 2001
From: Martin Larralde <martin.larralde@embl.de>
Date: Thu, 19 Sep 2024 16:31:51 +0200
Subject: [PATCH] Release v0.5.2

---
 .github/workflows/package.yml   | 56 +++++++++++++++++++--------------
 CHANGELOG.md                    |  7 +++++
 docs/_static/json/switcher.json |  4 +--
 pyfamsa/_version.py             |  2 +-
 4 files changed, 43 insertions(+), 26 deletions(-)

diff --git a/.github/workflows/package.yml b/.github/workflows/package.yml
index 74d910c..7fa4ffb 100644
--- a/.github/workflows/package.yml
+++ b/.github/workflows/package.yml
@@ -44,9 +44,9 @@ jobs:
         CIBW_TEST_REQUIRES: importlib-resources
       with:
         output-dir: dist
-    - uses: actions/upload-artifact@v3
+    - uses: actions/upload-artifact@v4
       with:
-        name: wheels
+        name: wheels-${{ matrix.python-tag }}
         path: dist/*
 
   wheel-linux-x86_64:
@@ -81,9 +81,9 @@ jobs:
         CIBW_TEST_REQUIRES: importlib-resources
       with:
         output-dir: dist
-    - uses: actions/upload-artifact@v3
+    - uses: actions/upload-artifact@v4
       with:
-        name: wheels
+        name: wheels-${{ matrix.python-tag }}
         path: dist/*
 
   wheel-macos-x86_64:
@@ -117,9 +117,9 @@ jobs:
         CIBW_TEST_REQUIRES: importlib-resources
       with:
         output-dir: dist
-    - uses: actions/upload-artifact@v3
+    - uses: actions/upload-artifact@v4
       with:
-        name: wheels
+        name: wheels-${{ matrix.python-tag }}
         path: dist/*
 
   wheel-macos-aarch64:
@@ -148,9 +148,9 @@ jobs:
         CIBW_TEST_REQUIRES: importlib-resources
       with:
         output-dir: dist
-    - uses: actions/upload-artifact@v3
+    - uses: actions/upload-artifact@v4
       with:
-        name: wheels
+        name: wheels-${{ matrix.python-tag }}
         path: dist/*
 
   wheel-win32-x86_64:
@@ -185,9 +185,9 @@ jobs:
         CIBW_TEST_REQUIRES: importlib-resources
       with:
         output-dir: dist
-    - uses: actions/upload-artifact@v3
+    - uses: actions/upload-artifact@v4
       with:
-        name: wheels
+        name: wheels-${{ matrix.python-tag }}
         path: dist/*
 
   sdist:
@@ -206,9 +206,9 @@ jobs:
     - name: Build source distribution
       run: python setup.py sdist
     - name: Store built source distribution
-      uses: actions/upload-artifact@v2
+      uses: actions/upload-artifact@v4
       with:
-        name: wheels
+        name: sdist
         path: dist/*
 
   test-sdist:
@@ -221,11 +221,12 @@ jobs:
       uses: actions/setup-python@v2
       with:
         python-version: '3.11'
-    - name: Download built wheels
-      uses: actions/download-artifact@v2
+    - name: Download source distribution
+      uses: actions/download-artifact@v4
       with:
-          name: wheels
-          path: dist/
+        name: sdist
+        path: dist/
+        merge-multiple: true
     - name: Update pip to latest version
       run: python -m pip install -U pip setuptools wheel
     - name: Install built wheel
@@ -248,10 +249,18 @@ jobs:
     - wheel-macos-x86_64
     - wheel-win32-x86_64
     steps:
-    - uses: actions/download-artifact@v2
+    - name: Download source distribution
+      uses: actions/download-artifact@v4
       with:
-        name: wheels
-        path: dist
+        name: sdist
+        path: dist/
+        merge-multiple: true
+    - name: Download wheel distributions
+      uses: actions/download-artifact@v4
+      with:
+        pattern: wheels-*
+        path: dist/
+        merge-multiple: true
     - uses: pypa/gh-action-pypi-publish@release/v1
       if: startsWith(github.ref, 'refs/tags')
 
@@ -288,11 +297,12 @@ jobs:
       uses: actions/setup-python@v2
       with:
         python-version: '3.10'
-    - name: Download built wheels
-      uses: actions/download-artifact@v2
+    - name: Download source distribution
+      uses: actions/download-artifact@v4
       with:
-          name: wheels
-          path: dist
+        name: sdist
+        path: dist/
+        merge-multiple: true
     - name: Extract package version
       run: echo PKGVER=$(python setup.py --version) >> $GITHUB_ENV
     - name: Compute SHA256 of source distribution
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 8cf2938..49367d4 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -9,6 +9,13 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.
 [Unreleased]: https://github.com/althonos/pyfamsa/compare/v0.5.1...HEAD
 
 
+## [v0.5.2] - 2024-09-19
+[v0.5.2]: https://github.com/althonos/pyfamsa/compare/v0.5.1...v0.5.2
+
+### Changed
+- Update to FAMSA [`v2.2.3`](https://github.com/refresh-bio/FAMSA/releases/tag/v2.2.3).
+
+
 ## [v0.5.1] - 2024-08-28
 [v0.5.1]: https://github.com/althonos/pyfamsa/compare/v0.5.0...v0.5.1
 
diff --git a/docs/_static/json/switcher.json b/docs/_static/json/switcher.json
index 38ce498..7b23b8f 100644
--- a/docs/_static/json/switcher.json
+++ b/docs/_static/json/switcher.json
@@ -1,8 +1,8 @@
 [
     {
         "name": "v0.5 (latest)",
-        "version": "0.5.1",
-        "url": "https://pyfamsa.readthedocs.io/en/v0.5.1/"
+        "version": "0.5.2",
+        "url": "https://pyfamsa.readthedocs.io/en/v0.5.2/"
     },
     {
         "name": "v0.4",
diff --git a/pyfamsa/_version.py b/pyfamsa/_version.py
index dd9b22c..7225152 100644
--- a/pyfamsa/_version.py
+++ b/pyfamsa/_version.py
@@ -1 +1 @@
-__version__ = "0.5.1"
+__version__ = "0.5.2"